FFCP PHASE1:Mm9::chr10:39089556..39089610,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:39089556..39089610,+ to FFCP PHASE1:Mm9::chr10:39089556..39089610,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14360 | |EntrezGene=14360 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=P39688 | |UniProt=P39688 | ||
|association_with_transcript=0bp_to_ENSMUST00000063091,ENSMUST00000099967,ENSMUST00000126486,NM_001122892,NM_001122893,NM_008054,uc007evx.2,uc007evy.2,uc011xcv.1_5end | |||
|cluster_id=chr10:39089556..39089610,+ | |||
|description=CAGE_peak_1_at_Fyn_5end | |||
|id=chr10:39089556..39089610,+ | |||
|ontology_enrichment_celltype=CL:0000540!6.42e-15!33;CL:0000047!6.42e-15!33;CL:0000031!6.42e-15!33;CL:0000404!6.42e-15!33;CL:0000221!2.27e-11!44;CL:0000133!2.27e-11!44;CL:0000393!2.45e-11!39;CL:0000211!2.45e-11!39;CL:0002319!4.79e-11!43;CL:0000117!1.99e-10!23;CL:0000337!1.99e-10!23;CL:0000055!4.96e-09!50;CL:0000791!1.47e-07!9;CL:0000789!1.47e-07!9;CL:0002420!1.47e-07!9;CL:0002419!1.47e-07!9;CL:0000790!1.47e-07!9;CL:0000624!6.79e-07!8;CL:0000838!7.83e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.41e-15,33;CL:0000047,6.41e-15,33;CL:0000031,6.41e-15,33;CL:0000404,6.41e-15,33;CL:0000221,2.27e-11,44;CL:0000133,2.27e-11,44;CL:0000393,2.45e-11,39;CL:0000211,2.45e-11,39;CL:0002319,4.78e-11,43;CL:0000117,1.99e-10,23;CL:0000337,1.99e-10,23;CL:0000791,1.47e-07,9;CL:0000789,1.47e-07,9;CL:0002420,1.47e-07,9;CL:0002419,1.47e-07,9;CL:0000790,1.47e-07,9;CL:0000624,6.79e-07,8;CL:0000838,7.83e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.48e-18!75;UBERON:0001016!1.48e-18!75;UBERON:0001017!5.43e-18!73;UBERON:0005743!5.43e-18!73;UBERON:0004121!2.96e-15!102;UBERON:0000924!2.96e-15!102;UBERON:0006601!2.96e-15!102;UBERON:0007811!1.31e-13!86;UBERON:0002020!3.08e-13!34;UBERON:0000153!5.26e-13!94;UBERON:0001049!8.59e-12!52;UBERON:0005068!8.59e-12!52;UBERON:0006241!8.59e-12!52;UBERON:0007135!8.59e-12!52;UBERON:0002346!4.09e-11!71;UBERON:0003075!4.09e-11!71;UBERON:0007284!4.09e-11!71;UBERON:0002791!2.15e-10!29;UBERON:0003528!2.15e-10!29;UBERON:0001893!2.15e-10!29;UBERON:0000955!2.44e-10!50;UBERON:0006238!2.44e-10!50;UBERON:0002616!8.38e-10!49;UBERON:0003080!5.93e-09!40;UBERON:0002780!1.06e-08!39;UBERON:0001890!1.06e-08!39;UBERON:0006240!1.06e-08!39;UBERON:0000033!2.64e-08!63;UBERON:0000956!4.73e-08!21;UBERON:0001869!4.73e-08!21;UBERON:0000203!4.73e-08!21;UBERON:0003056!2.48e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.48e-18,75;UBERON:0001017,5.43e-18,73;UBERON:0004121,2.02e-15,95;UBERON:0000924,2.02e-15,95;UBERON:0006601,2.02e-15,95;UBERON:0002020,3.08e-13,34;UBERON:0000073,2.27e-12,54;UBERON:0001049,8.59e-12,52;UBERON:0005068,8.59e-12,52;UBERON:0006241,8.59e-12,52;UBERON:0007135,8.59e-12,52;UBERON:0002346,1.92e-11,64;UBERON:0003075,1.92e-11,64;UBERON:0007284,1.92e-11,64;UBERON:0010371,3.25e-11,73;UBERON:0003528,2.15e-10,29;UBERON:0002791,2.15e-10,29;UBERON:0001893,2.15e-10,29;UBERON:0000955,1.60e-09,47;UBERON:0006238,1.60e-09,47;UBERON:0010314,1.71e-09,92;UBERON:0002616,5.35e-09,46;UBERON:0003080,5.93e-09,40;UBERON:0002780,1.06e-08,39;UBERON:0001890,1.06e-08,39;UBERON:0006240,1.06e-08,39;UBERON:0000956,4.73e-08,21;UBERON:0001869,4.73e-08,21;UBERON:0000203,4.73e-08,21;UBERON:0003056,2.48e-07,49 | |||
|phase1_expression=45.6424214248663,0,0.454999239389536,0,0.500895729946347,3.02182689441402,1.63528848416868,391.760163321742,928.783200034546,1149.02275971467,385.411646475612,331.931953579595,325.623788329153,359.035592734822,31.3123176106723,35.0282212584399,19.5877325875881,86.7520954735154,82.8171178978662,70.448682198473,54.6828355671379,52.4256222340674,46.4935624667305,9.27956052201759,11.2410547722913,0,1.29228598847722,0.861884930743556,6.65081968097309,11.089325709437,8.20402889424627,0,0,0,3.46621943701529,3.65716219788683,4.08338712524738,2.09265815368454,4.6880120671428,5.23523743973798,1.17646297606203,0,2.42755176515577,39.909291298258,37.6108414824399,35.9751634236896,18.7773922643529,35.9741508027737,44.3766089123633,35.1918117324453,25.8974880006921,43.1257693094915,153.688867148887,500.499877987828,373.400210847277,47.3357362306142,51.862552628915,33.0030139057563,102.776762116676,129.602789921648,109.019001403063,20.3306719241479,10.6715375533337,27.4469413770827,28.6771245144423,22.0248835633291,70.7056260823435,61.8591471567703,139.669907779519,135.950979900012,134.818300226236,179.103167221185,200.327766643113,124.695633600823,129.774767758692,137.882817991503,88.092704799511,93.0840694641018,93.6999852863085,139.008147267624,131.925182074675,138.562956568098,77.8920567213853,65.2804627636749,77.1631151272891,148.492807078729,149.632636519857,135.698796560819,95.7179083731446,78.5188509509502,321.169853481459,109.273832376636,0.679971333707751,4.85732872474035,11.695975514058,8.51251085484938,23.7351070022661,37.3242406445946,28.5764605063156,29.6805242588686,102.111479338093,48.7640614174408,45.8649431471962,78.2173373468664,1.5154372870785,1.77351905832569,1.01104889002957,21.2382016277452,174.524133578194,68.7287103870139,49.9637741086471,52.3680622696883,54.8864883469419,65.7150712809434,77.2557805881581,51.900302219156,17.3036477414062,35.5714418022983,56.615075324792,69.3979786274385,51.4560738012717,57.2152798699562,18.6391761218122,102.473278954042,118.756282763229,23.757506134399,49.8430917944628,19.196887391789,26.0493965499783,87.7773146912261,80.0626054932596,156.18835967629,95.9510247461366,115.327671255979,85.6086743585388,116.813709408785,70.2691610567182,46.777020949395,5.55990068554084,14.7309299120532,37.344567130296,51.7279734975314,54.7388874608262,60.4326319521217,66.811842166604,71.3593421986613,61.2809278620627,45.5317932500668,29.7483830247322,37.4430038732282,42.5801720476756,40.3320147666738,60.0582058327291,83.2322677987978,69.7601442422928,65.2832395164658,11.937624184325,10.0365683774739,9.66155897945015,36.0398844211773,34.4753308172211,37.2728467224301,44.5080102900195,43.0913667526814,44.4289285115649,50.9249339003393,56.6056876953197,49.0414437942112,58.2541868693721,85.2029138570504,84.7169059754192,103.655791084561,77.5011906977409,76.4976586934119,105.775844127756,168.351945852509,35.6852285622502,13.2225283331772,36.0457143404545,53.6466711997613,51.6758519901594,38.1181861538117,38.2490235413177,34.0503870741481,24.6755112003146,36.5631679487304,44.4863319576477,38.7965120480244,40.3575660336579,22.4704852163555,14.6973873914792,16.3295844068581,32.8125468648831,42.2719496655997,52.9726357663478,41.5448708804441,42.47559468971,48.3235799044295,47.68034899169,24.9461150085528,19.6248409801719,18.0159859325829,21.937494404449,39.3754449489982,38.3290040470746,34.4039031948826,42.6006254915856,37.1412826018722,32.5921090280217,33.372751944294,38.7503191992335,29.9271940375009,54.6319184803947,51.3554507782535,42.7491612166948,34.3507274008072,26.3714197877211,26.0519501536218,62.0770718959792,42.8250590601296,49.5413528383759,42.9455067011226,38.7238909676028,51.4244210346374,53.7978628402391,61.2719654273488,87.1722346907236,81.4990057907492,86.2650298437005,73.0830383632191,71.3188975106149,60.7526046042349,25.6345182696763,19.0366989336548,19.6705709207614,24.0064969285117,80.5963961738716,102.911860827954,44.2624352517024,43.4249994791522,134.722009690742,140.167509202493,147.134180651502,154.373843477349,154.845078487264,172.676683781188,155.852120144834,130.930624344268,148.628204507893,210.786783572705,71.6797430301757,57.3371243808562,70.8558273188056,70.2772723863001,21.2392221343941,47.8277853225313,45.3485335447127,45.4538242211714,52.5637369327776,72.2472597668229,62.0227903603731,57.4383292574459,57.3960779199401,36.9763006784905,18.9753495434998,20.6271086496374,47.6615448055303,49.5168008586103,40.7479853915677,48.868843987203,59.7636587374462,56.1861775446522,62.6931768494081,42.6250928760439,46.6996699046784,27.114505070569,6.61585194164886,81.4538089530911,83.800037455175,65.017333072552,68.6390978018035,101.767357841938,25.9417944600567,90.8583979851497,56.5582615440892,46.2306584237618,38.5204616929,36.5434806589101,38.9578549004922,48.5009727197828,66.8015229875851,62.9781535456461,68.2707870593854,8.59203556213602,36.3786392618306,52.0497835844733,43.7421630328295,46.2085134191976,50.441752225367,36.4133735239016,40.3348863939639,23.5580347785627,17.8868663142674,24.2322332103901,47.9138997881562,119.015170651007,101.095137669287,106.753702400882,98.936424783942,106.273402933699,111.254662236175,112.756997274861,126.460369377407,77.5485027851479,63.3666013767304,125.140403768759,46.6267995167378,38.7220308511399,46.3817338030728,58.3627027875989,68.3463860447551,103.247891137653,105.007253821124,91.0717378532292,96.5540240318848,94.8774402137669,125.038460989102,119.87995468385,131.369638052084,57.1360566710333,14.4290869693142,6.81825310232015,11.7519231454855,20.4780969674122,51.8003632245262,57.1433067713867,18.4356806007997,14.0440189129902,134.410938542862,131.192692404545,138.067818738895,91.2540398244981,135.646338914587,117.841447992793,122.179072541957,104.924840351243,96.0661907046514,116.496070144159,42.5528125095124,73.4205767057897,61.9762988887507,81.1976435008102,65.1896935773025,84.0164833616565,74.4526538135411,68.197603946074,74.774175834893,73.5348886232651,77.3111864665231,76.5822946027469,64.7999231691586,72.2843970650974,69.209740091514,70.4914663098949,78.9172259684466,73.3055037762079,77.8842352518249,84.9337769175473,71.3168044961664,61.4066289311308,68.1927503249338,80.6672612309423,70.9584728331593,70.8224268053332,70.0614136102719,72.6072403568446,73.4700255906112,62.8479344256667,78.0618419257066,76.8334962529395,71.2062015115259,69.7215785336847,73.3045121728337,103.921200422186,70.1794825336225,75.634611025001,67.142204556164,67.5009742505717,57.7350910694849 | |phase1_expression=45.6424214248663,0,0.454999239389536,0,0.500895729946347,3.02182689441402,1.63528848416868,391.760163321742,928.783200034546,1149.02275971467,385.411646475612,331.931953579595,325.623788329153,359.035592734822,31.3123176106723,35.0282212584399,19.5877325875881,86.7520954735154,82.8171178978662,70.448682198473,54.6828355671379,52.4256222340674,46.4935624667305,9.27956052201759,11.2410547722913,0,1.29228598847722,0.861884930743556,6.65081968097309,11.089325709437,8.20402889424627,0,0,0,3.46621943701529,3.65716219788683,4.08338712524738,2.09265815368454,4.6880120671428,5.23523743973798,1.17646297606203,0,2.42755176515577,39.909291298258,37.6108414824399,35.9751634236896,18.7773922643529,35.9741508027737,44.3766089123633,35.1918117324453,25.8974880006921,43.1257693094915,153.688867148887,500.499877987828,373.400210847277,47.3357362306142,51.862552628915,33.0030139057563,102.776762116676,129.602789921648,109.019001403063,20.3306719241479,10.6715375533337,27.4469413770827,28.6771245144423,22.0248835633291,70.7056260823435,61.8591471567703,139.669907779519,135.950979900012,134.818300226236,179.103167221185,200.327766643113,124.695633600823,129.774767758692,137.882817991503,88.092704799511,93.0840694641018,93.6999852863085,139.008147267624,131.925182074675,138.562956568098,77.8920567213853,65.2804627636749,77.1631151272891,148.492807078729,149.632636519857,135.698796560819,95.7179083731446,78.5188509509502,321.169853481459,109.273832376636,0.679971333707751,4.85732872474035,11.695975514058,8.51251085484938,23.7351070022661,37.3242406445946,28.5764605063156,29.6805242588686,102.111479338093,48.7640614174408,45.8649431471962,78.2173373468664,1.5154372870785,1.77351905832569,1.01104889002957,21.2382016277452,174.524133578194,68.7287103870139,49.9637741086471,52.3680622696883,54.8864883469419,65.7150712809434,77.2557805881581,51.900302219156,17.3036477414062,35.5714418022983,56.615075324792,69.3979786274385,51.4560738012717,57.2152798699562,18.6391761218122,102.473278954042,118.756282763229,23.757506134399,49.8430917944628,19.196887391789,26.0493965499783,87.7773146912261,80.0626054932596,156.18835967629,95.9510247461366,115.327671255979,85.6086743585388,116.813709408785,70.2691610567182,46.777020949395,5.55990068554084,14.7309299120532,37.344567130296,51.7279734975314,54.7388874608262,60.4326319521217,66.811842166604,71.3593421986613,61.2809278620627,45.5317932500668,29.7483830247322,37.4430038732282,42.5801720476756,40.3320147666738,60.0582058327291,83.2322677987978,69.7601442422928,65.2832395164658,11.937624184325,10.0365683774739,9.66155897945015,36.0398844211773,34.4753308172211,37.2728467224301,44.5080102900195,43.0913667526814,44.4289285115649,50.9249339003393,56.6056876953197,49.0414437942112,58.2541868693721,85.2029138570504,84.7169059754192,103.655791084561,77.5011906977409,76.4976586934119,105.775844127756,168.351945852509,35.6852285622502,13.2225283331772,36.0457143404545,53.6466711997613,51.6758519901594,38.1181861538117,38.2490235413177,34.0503870741481,24.6755112003146,36.5631679487304,44.4863319576477,38.7965120480244,40.3575660336579,22.4704852163555,14.6973873914792,16.3295844068581,32.8125468648831,42.2719496655997,52.9726357663478,41.5448708804441,42.47559468971,48.3235799044295,47.68034899169,24.9461150085528,19.6248409801719,18.0159859325829,21.937494404449,39.3754449489982,38.3290040470746,34.4039031948826,42.6006254915856,37.1412826018722,32.5921090280217,33.372751944294,38.7503191992335,29.9271940375009,54.6319184803947,51.3554507782535,42.7491612166948,34.3507274008072,26.3714197877211,26.0519501536218,62.0770718959792,42.8250590601296,49.5413528383759,42.9455067011226,38.7238909676028,51.4244210346374,53.7978628402391,61.2719654273488,87.1722346907236,81.4990057907492,86.2650298437005,73.0830383632191,71.3188975106149,60.7526046042349,25.6345182696763,19.0366989336548,19.6705709207614,24.0064969285117,80.5963961738716,102.911860827954,44.2624352517024,43.4249994791522,134.722009690742,140.167509202493,147.134180651502,154.373843477349,154.845078487264,172.676683781188,155.852120144834,130.930624344268,148.628204507893,210.786783572705,71.6797430301757,57.3371243808562,70.8558273188056,70.2772723863001,21.2392221343941,47.8277853225313,45.3485335447127,45.4538242211714,52.5637369327776,72.2472597668229,62.0227903603731,57.4383292574459,57.3960779199401,36.9763006784905,18.9753495434998,20.6271086496374,47.6615448055303,49.5168008586103,40.7479853915677,48.868843987203,59.7636587374462,56.1861775446522,62.6931768494081,42.6250928760439,46.6996699046784,27.114505070569,6.61585194164886,81.4538089530911,83.800037455175,65.017333072552,68.6390978018035,101.767357841938,25.9417944600567,90.8583979851497,56.5582615440892,46.2306584237618,38.5204616929,36.5434806589101,38.9578549004922,48.5009727197828,66.8015229875851,62.9781535456461,68.2707870593854,8.59203556213602,36.3786392618306,52.0497835844733,43.7421630328295,46.2085134191976,50.441752225367,36.4133735239016,40.3348863939639,23.5580347785627,17.8868663142674,24.2322332103901,47.9138997881562,119.015170651007,101.095137669287,106.753702400882,98.936424783942,106.273402933699,111.254662236175,112.756997274861,126.460369377407,77.5485027851479,63.3666013767304,125.140403768759,46.6267995167378,38.7220308511399,46.3817338030728,58.3627027875989,68.3463860447551,103.247891137653,105.007253821124,91.0717378532292,96.5540240318848,94.8774402137669,125.038460989102,119.87995468385,131.369638052084,57.1360566710333,14.4290869693142,6.81825310232015,11.7519231454855,20.4780969674122,51.8003632245262,57.1433067713867,18.4356806007997,14.0440189129902,134.410938542862,131.192692404545,138.067818738895,91.2540398244981,135.646338914587,117.841447992793,122.179072541957,104.924840351243,96.0661907046514,116.496070144159,42.5528125095124,73.4205767057897,61.9762988887507,81.1976435008102,65.1896935773025,84.0164833616565,74.4526538135411,68.197603946074,74.774175834893,73.5348886232651,77.3111864665231,76.5822946027469,64.7999231691586,72.2843970650974,69.209740091514,70.4914663098949,78.9172259684466,73.3055037762079,77.8842352518249,84.9337769175473,71.3168044961664,61.4066289311308,68.1927503249338,80.6672612309423,70.9584728331593,70.8224268053332,70.0614136102719,72.6072403568446,73.4700255906112,62.8479344256667,78.0618419257066,76.8334962529395,71.2062015115259,69.7215785336847,73.3045121728337,103.921200422186,70.1794825336225,75.634611025001,67.142204556164,67.5009742505717,57.7350910694849 | ||
|short_description=p1@Fyn | |||
}} | }} |
Latest revision as of 23:44, 25 September 2015
Short description: | p1@Fyn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fyn_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 0bp_to_ENSMUST00000063091, ENSMUST00000099967, ENSMUST00000126486, NM_001122892, NM_001122893, NM_008054, uc007evx.2, uc007evy.2, uc011xcv.1_5end |
EntrezGene: | Fyn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.41e-15 | 33 |
neuronal stem cell | 6.41e-15 | 33 |
neuroblast | 6.41e-15 | 33 |
electrically signaling cell | 6.41e-15 | 33 |
ectodermal cell | 2.27e-11 | 44 |
neurectodermal cell | 2.27e-11 | 44 |
electrically responsive cell | 2.45e-11 | 39 |
electrically active cell | 2.45e-11 | 39 |
neural cell | 4.78e-11 | 43 |
CNS neuron (sensu Vertebrata) | 1.99e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.99e-10 | 23 |
mature alpha-beta T cell | 1.47e-07 | 9 |
alpha-beta T cell | 1.47e-07 | 9 |
immature T cell | 1.47e-07 | 9 |
mature T cell | 1.47e-07 | 9 |
immature alpha-beta T cell | 1.47e-07 | 9 |
CD4-positive, alpha-beta T cell | 6.79e-07 | 8 |
lymphoid lineage restricted progenitor cell | 7.83e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.48e-18 | 75 |
central nervous system | 5.43e-18 | 73 |
ectoderm-derived structure | 2.02e-15 | 95 |
ectoderm | 2.02e-15 | 95 |
presumptive ectoderm | 2.02e-15 | 95 |
gray matter | 3.08e-13 | 34 |
regional part of nervous system | 2.27e-12 | 54 |
neural tube | 8.59e-12 | 52 |
neural rod | 8.59e-12 | 52 |
future spinal cord | 8.59e-12 | 52 |
neural keel | 8.59e-12 | 52 |
neurectoderm | 1.92e-11 | 64 |
neural plate | 1.92e-11 | 64 |
presumptive neural plate | 1.92e-11 | 64 |
ecto-epithelium | 3.25e-11 | 73 |
brain grey matter | 2.15e-10 | 29 |
regional part of telencephalon | 2.15e-10 | 29 |
telencephalon | 2.15e-10 | 29 |
brain | 1.60e-09 | 47 |
future brain | 1.60e-09 | 47 |
structure with developmental contribution from neural crest | 1.71e-09 | 92 |
regional part of brain | 5.35e-09 | 46 |
anterior neural tube | 5.93e-09 | 40 |
regional part of forebrain | 1.06e-08 | 39 |
forebrain | 1.06e-08 | 39 |
future forebrain | 1.06e-08 | 39 |
cerebral cortex | 4.73e-08 | 21 |
cerebral hemisphere | 4.73e-08 | 21 |
pallium | 4.73e-08 | 21 |
pre-chordal neural plate | 2.48e-07 | 49 |