FFCP PHASE1:Mm9::chr14:47504251..47504260,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:47504251..47504260,+
|short_description=p10@Samd4
|description=CAGE_peak_10_at_Samd4_5end
|association_with_transcript=401bp_to_ENSMUST00000137543,uc007th...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=74480 | |EntrezGene=74480 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8CBY1 | |UniProt=Q8CBY1 | ||
|association_with_transcript=401bp_to_ENSMUST00000137543,uc007thp.1_5end | |||
|cluster_id=chr14:47504251..47504260,+ | |||
|description=CAGE_peak_10_at_Samd4_5end | |||
|id=chr14:47504251..47504260,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.14e-10!50;CL:0000393!2.40e-08!39;CL:0000211!2.40e-08!39;CL:0002319!1.18e-07!43;CL:0000221!2.86e-07!44;CL:0000133!2.86e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.75e-10,3;CL:0000359,1.75e-10,3;CL:0002539,1.75e-10,3;CL:0000514,1.75e-10,3;CL:0002293,4.52e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.75e-10,3;UBERON:0004237,1.75e-10,3;UBERON:0004695,1.75e-10,3;UBERON:0002111,1.75e-10,3;UBERON:0004178,1.75e-10,3;UBERON:0000947,4.46e-08,4;UBERON:0001637,4.46e-08,4;UBERON:0004573,4.46e-08,4;UBERON:0003509,4.46e-08,4;UBERON:0004571,4.46e-08,4;UBERON:0010191,4.46e-08,4;UBERON:0004572,4.46e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.63845168425395,0,0.0797721589953364,0,0,0,0,0,0.157731082679119,0,0,0.510259740906419,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7697299954627,3.64956952390252,0.917733760808408,0,1.96222640742402,0,3.30530828426282,0.979904951377538,0,0,0,0,0.771778308107841,0.85960031981627,0,0.202316460859598,1.05798195854407,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,0.103689612308478,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0.383381884072945,0,0,0.766124028511126,0.307213066512487,0.131886287730194,0.731901148819277,0,1.11673199600552,0.56276261003168,0.45839474333043,0,0.427115042397309,0.372798891650601,0.151452386666368,0.151143120213571,0,0,0.679971333707751,0.539703191637817,0,0,0.421333260395256,1.02258193546835,2.07828803682295,0.70667914902068,0,1.28326477414318,2.54805239706646,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0.23517741427141,0,0.494389935468748,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0.164167464079095,0.243206428637567,0,0.219550115291051,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0.329397909448022,0.502670417600539,0,0,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0.581857461502877,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0,0,1.43768206527355,0,0,0,0.179397413521912,0,0,0.189491411770485,0,0,0.469380496577004,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0.289298117163023,0,0,0,0,0.321101179975584,0,0.327869890753351,0.252470927204373,0,0.780877488593277,0.646270193198397,0.477937595905104,0.668396022247182,0,0,0,0.395287777946524,0,0.141940085208269,0.35613120733451,0,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0.36012218806262,0,0,0,0.178368817602071,0,0,0,0.21183207086382,0,0.16488625294148,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.443971906748129,0.179427713218951,0.167884616364078,0.386379188064381,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0.755393897389701,0,0.45032120322422,0,0,0.415149390336707,0.399024873401031,0,0,0,0.183843508450014,0.666740183404846,0,0,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0,0,0.231768651889711,0,0.412085900803307,0.441596760403192,1.02860775715625,0,0.953744759789284,0.145346416632329,0.282328141245992,0.0846146078916765,0.365855945745545,0,0.407412341537585,0.561142271657738,0.118635018124174,0.394017929502254,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,1.63845168425395,0,0.0797721589953364,0,0,0,0,0,0.157731082679119,0,0,0.510259740906419,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7697299954627,3.64956952390252,0.917733760808408,0,1.96222640742402,0,3.30530828426282,0.979904951377538,0,0,0,0,0.771778308107841,0.85960031981627,0,0.202316460859598,1.05798195854407,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,0.103689612308478,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0.383381884072945,0,0,0.766124028511126,0.307213066512487,0.131886287730194,0.731901148819277,0,1.11673199600552,0.56276261003168,0.45839474333043,0,0.427115042397309,0.372798891650601,0.151452386666368,0.151143120213571,0,0,0.679971333707751,0.539703191637817,0,0,0.421333260395256,1.02258193546835,2.07828803682295,0.70667914902068,0,1.28326477414318,2.54805239706646,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0.23517741427141,0,0.494389935468748,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0.164167464079095,0.243206428637567,0,0.219550115291051,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0.329397909448022,0.502670417600539,0,0,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0.581857461502877,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0,0,1.43768206527355,0,0,0,0.179397413521912,0,0,0.189491411770485,0,0,0.469380496577004,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0.289298117163023,0,0,0,0,0.321101179975584,0,0.327869890753351,0.252470927204373,0,0.780877488593277,0.646270193198397,0.477937595905104,0.668396022247182,0,0,0,0.395287777946524,0,0.141940085208269,0.35613120733451,0,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0.36012218806262,0,0,0,0.178368817602071,0,0,0,0.21183207086382,0,0.16488625294148,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.443971906748129,0.179427713218951,0.167884616364078,0.386379188064381,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0.755393897389701,0,0.45032120322422,0,0,0.415149390336707,0.399024873401031,0,0,0,0.183843508450014,0.666740183404846,0,0,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0,0,0.231768651889711,0,0.412085900803307,0.441596760403192,1.02860775715625,0,0.953744759789284,0.145346416632329,0.282328141245992,0.0846146078916765,0.365855945745545,0,0.407412341537585,0.561142271657738,0.118635018124174,0.394017929502254,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p10@Samd4 | |||
}} | }} |
Latest revision as of 23:45, 25 September 2015
Short description: | p10@Samd4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Samd4_5end |
Coexpression cluster: | NA |
Association with transcript: | 401bp_to_ENSMUST00000137543, uc007thp.1_5end |
EntrezGene: | Samd4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.75e-10 | 3 |
vascular associated smooth muscle cell | 1.75e-10 | 3 |
aortic smooth muscle cell | 1.75e-10 | 3 |
smooth muscle myoblast | 1.75e-10 | 3 |
epithelial cell of thymus | 4.52e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 1.75e-10 | 3 |
blood vessel smooth muscle | 1.75e-10 | 3 |
arterial system smooth muscle | 1.75e-10 | 3 |
artery smooth muscle tissue | 1.75e-10 | 3 |
aorta smooth muscle tissue | 1.75e-10 | 3 |
aorta | 4.46e-08 | 4 |
artery | 4.46e-08 | 4 |
systemic artery | 4.46e-08 | 4 |
arterial blood vessel | 4.46e-08 | 4 |
systemic arterial system | 4.46e-08 | 4 |
aortic system | 4.46e-08 | 4 |
arterial system | 4.46e-08 | 4 |