FFCP PHASE1:Mm9::chr2:156218730..156218739,-: Difference between revisions
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{{FFCP|EntrezGene=347740|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-15bp_to_NR_024329,uc012chs.1_5end|description=CAGE_peak_2_at_2900097C17Rik_5end|id=chr2:156218730..156218739,-|ontology_enrichment_celltype=CL:0000117!7.48e-11!23;CL:0000337!7.48e-11!23|ontology_enrichment_celltype_v019_2=CL:0000117,6.94e-12,23;CL:0000337,6.94e-12,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.17e-18!63;UBERON:0001049!2.39e-18!52;UBERON:0005068!2.39e-18!52;UBERON:0006241!2.39e-18!52;UBERON:0007135!2.39e-18!52;UBERON:0000955!2.02e-17!50;UBERON:0006238!2.02e-17!50;UBERON:0002616!8.06e-17!49;UBERON:0002346!2.65e-16!71;UBERON:0003075!2.65e-16!71;UBERON:0007284!2.65e-16!71;UBERON:0002020!6.67e-16!34;UBERON:0001017!1.80e-15!73;UBERON:0005743!1.80e-15!73;UBERON:0003056!3.34e-15!49;UBERON:0003080!4.08e-15!40;UBERON:0004121!4.87e-15!102;UBERON:0000924!4.87e-15!102;UBERON:0006601!4.87e-15!102;UBERON:0002780!1.76e-14!39;UBERON:0001890!1.76e-14!39;UBERON:0006240!1.76e-14!39;UBERON:0000073!3.07e-14!75;UBERON:0001016!3.07e-14!75;UBERON:0002791!3.33e-13!29;UBERON:0003528!3.33e-13!29;UBERON:0001893!3.33e-13!29;UBERON:0004111!1.28e-10!122;UBERON:0000025!1.90e-10!114;UBERON:0000153!3.09e-10!94;UBERON:0007811!3.38e-10!86;UBERON:0000956!8.25e-10!21;UBERON:0001869!8.25e-10!21;UBERON:0000203!8.25e-10!21;UBERON:0002619!7.23e-08!17;UBERON:0002021!1.85e-07!10;UBERON:0000411!1.85e-07!10;UBERON:0001950!1.85e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.30e-21,54;UBERON:0001049,8.19e-20,52;UBERON:0005068,8.19e-20,52;UBERON:0006241,8.19e-20,52;UBERON:0007135,8.19e-20,52;UBERON:0002346,1.03e-17,64;UBERON:0003075,1.03e-17,64;UBERON:0007284,1.03e-17,64;UBERON:0002020,3.45e-17,34;UBERON:0010371,3.77e-17,73;UBERON:0001017,7.69e-17,73;UBERON:0010314,8.23e-17,92;UBERON:0000955,1.05e-16,47;UBERON:0006238,1.05e-16,47;UBERON:0002616,4.63e-16,46;UBERON:0004121,6.66e-16,95;UBERON:0000924,6.66e-16,95;UBERON:0006601,6.66e-16,95;UBERON:0001016,1.20e-15,75;UBERON:0003080,1.53e-15,40;UBERON:0003056,1.54e-15,49;UBERON:0002780,7.50e-15,39;UBERON:0001890,7.50e-15,39;UBERON:0006240,7.50e-15,39;UBERON:0003528,3.37e-14,29;UBERON:0002791,3.37e-14,29;UBERON:0001893,3.37e-14,29;UBERON:0004111,1.26e-10,122;UBERON:0000025,1.72e-10,114;UBERON:0000956,1.96e-10,21;UBERON:0001869,1.96e-10,21;UBERON:0000203,1.96e-10,21;UBERON:0002619,2.75e-08,17;UBERON:0002021,4.07e-08,10;UBERON:0000411,4.07e-08,10;UBERON:0001950,4.07e-08,10|phase1_expression=2.24208385946712,0.348975407639361,0.909998478779072,0,0,1.17515490338323,0.700837921786577,0.387369970324729,0.84473233291,0.234064526321993,0,0.797721589953364,0.684802919724823,0.262261207256992,1.33243904726265,0.202475267389826,0,0.157731082679119,0.959801035240171,1.69755860719212,2.55129870453209,0.595745707205312,0.522399578277871,0.159992422793407,0.22940928106717,1.14846392823004,0.86152399231815,0.430942465371778,0.380046838912748,0.252030129759931,0,0,0.61506478758457,0,1.1554064790051,0.831173226792462,1.22501613757421,0,0,0,1.17646297606203,0,0,0.629484089877886,0.506884656097573,0.550640256485045,0,0.218025156380447,1.09843091367236,0.777719596297134,0.979904951377538,0,1.00669563634642,0,0.336093799142464,0,0.286533439938757,0,2.02316460859598,2.64495489636016,3.80298842103708,0.338844532069132,0,0.899899717281399,0,0.7104801149461,0.299600110518405,1.53687322128622,3.7328260431052,2.16009501330705,3.15487442027073,4.28476476605705,3.53389665522582,2.44981598429908,1.24599112323707,1.83843757322004,5.50579404996943,6.12899222808901,6.45147439676223,1.71452174049252,2.01272815925301,1.56274011167028,5.02529398202486,3.37657566019008,5.65353516774197,4.12480019663135,3.27454865837937,5.03278503728312,0.302904773332736,0.453429360640713,0.579728977403356,0,0.679971333707751,1.07940638327563,2.59910566979068,1.34408066129201,1.12355536105401,0.681721290312231,0.779358013808606,0,1.40843419776681,0,2.54805239706646,0,0.216491041011214,1.26679932737549,0,2.05530983494308,0.776813650941515,1.48442139064825,1.73485326766136,0.608930956624282,1.15307748628029,0.753613202763113,1.76383060703557,1.88499886994513,0.247194967734374,1.44599356919912,0.884610551949874,0.970601099684455,0,1.93950101254089,0,1.75668478206928,4.81727425670947,0.766371165625774,1.31796636956512,0.599902730993408,0.889491589511453,6.14141621559773,5.49000723382352,4.77486538028885,7.64827008846016,7.16003280524926,5.81806524766768,5.51620294430376,4.27725328171328,0.746441823660558,1.0108910337347,1.68353484709179,1.82168620147785,1.14951052216736,0.720248519221397,1.20563854268572,2.17716797284249,1.5373646434182,1.12442069471675,1.55222022443409,1.72454394346274,0.756424320671277,1.40760899331159,1.09597866213787,1.11218899690239,1.39300866608867,1.4404749548556,1.19420560091096,0.702213187313235,0,1.13665399758237,0.207125772535502,0.703578179943289,1.2604344302271,1.18372367792605,0.787056926989615,1.07986979021165,0.697601834251224,2.14618721119695,1.6347147931403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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=347740 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-15bp_to_NR_024329,uc012chs.1_5end | |||
|cluster_id=chr2:156218730..156218739,- | |||
|description=CAGE_peak_2_at_2900097C17Rik_5end | |||
|id=chr2:156218730..156218739,- | |||
|ontology_enrichment_celltype=CL:0000117!7.48e-11!23;CL:0000337!7.48e-11!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.94e-12,23;CL:0000337,6.94e-12,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.17e-18!63;UBERON:0001049!2.39e-18!52;UBERON:0005068!2.39e-18!52;UBERON:0006241!2.39e-18!52;UBERON:0007135!2.39e-18!52;UBERON:0000955!2.02e-17!50;UBERON:0006238!2.02e-17!50;UBERON:0002616!8.06e-17!49;UBERON:0002346!2.65e-16!71;UBERON:0003075!2.65e-16!71;UBERON:0007284!2.65e-16!71;UBERON:0002020!6.67e-16!34;UBERON:0001017!1.80e-15!73;UBERON:0005743!1.80e-15!73;UBERON:0003056!3.34e-15!49;UBERON:0003080!4.08e-15!40;UBERON:0004121!4.87e-15!102;UBERON:0000924!4.87e-15!102;UBERON:0006601!4.87e-15!102;UBERON:0002780!1.76e-14!39;UBERON:0001890!1.76e-14!39;UBERON:0006240!1.76e-14!39;UBERON:0000073!3.07e-14!75;UBERON:0001016!3.07e-14!75;UBERON:0002791!3.33e-13!29;UBERON:0003528!3.33e-13!29;UBERON:0001893!3.33e-13!29;UBERON:0004111!1.28e-10!122;UBERON:0000025!1.90e-10!114;UBERON:0000153!3.09e-10!94;UBERON:0007811!3.38e-10!86;UBERON:0000956!8.25e-10!21;UBERON:0001869!8.25e-10!21;UBERON:0000203!8.25e-10!21;UBERON:0002619!7.23e-08!17;UBERON:0002021!1.85e-07!10;UBERON:0000411!1.85e-07!10;UBERON:0001950!1.85e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.30e-21,54;UBERON:0001049,8.19e-20,52;UBERON:0005068,8.19e-20,52;UBERON:0006241,8.19e-20,52;UBERON:0007135,8.19e-20,52;UBERON:0002346,1.03e-17,64;UBERON:0003075,1.03e-17,64;UBERON:0007284,1.03e-17,64;UBERON:0002020,3.45e-17,34;UBERON:0010371,3.77e-17,73;UBERON:0001017,7.69e-17,73;UBERON:0010314,8.23e-17,92;UBERON:0000955,1.05e-16,47;UBERON:0006238,1.05e-16,47;UBERON:0002616,4.63e-16,46;UBERON:0004121,6.66e-16,95;UBERON:0000924,6.66e-16,95;UBERON:0006601,6.66e-16,95;UBERON:0001016,1.20e-15,75;UBERON:0003080,1.53e-15,40;UBERON:0003056,1.54e-15,49;UBERON:0002780,7.50e-15,39;UBERON:0001890,7.50e-15,39;UBERON:0006240,7.50e-15,39;UBERON:0003528,3.37e-14,29;UBERON:0002791,3.37e-14,29;UBERON:0001893,3.37e-14,29;UBERON:0004111,1.26e-10,122;UBERON:0000025,1.72e-10,114;UBERON:0000956,1.96e-10,21;UBERON:0001869,1.96e-10,21;UBERON:0000203,1.96e-10,21;UBERON:0002619,2.75e-08,17;UBERON:0002021,4.07e-08,10;UBERON:0000411,4.07e-08,10;UBERON:0001950,4.07e-08,10 | |||
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| |||
|short_description=p2@2900097C17Rik | |||
}} |
Latest revision as of 23:56, 25 September 2015
Short description: | p2@2900097C17Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_2900097C17Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -15bp_to_NR_024329, uc012chs.1_5end |
EntrezGene: | 2900097C17Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.94e-12 | 23 |
neuroblast (sensu Vertebrata) | 6.94e-12 | 23 |