FFCP PHASE1:Mm9::chr19:55969646..55969665,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21416 | |EntrezGene=21416 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C834 | |UniProt=Q8C834 | ||
|association_with_transcript=-145bp_to_NM_001142924,uc008hyn.2_5end | |association_with_transcript=-145bp_to_NM_001142924,uc008hyn.2_5end | ||
|cluster_id=chr19:55969646..55969665,+ | |||
|description=CAGE_peak_26_at_Tcf7l2_5end | |description=CAGE_peak_26_at_Tcf7l2_5end | ||
|id=chr19:55969646..55969665,+ | |id=chr19:55969646..55969665,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.34e-25,23;CL:0000337,3.34e-25,23;CL:0002613,1.19e-23,3;CL:0000120,1.10e-22,3;CL:0002610,8.23e-22,3;CL:0000540,2.25e-17,33;CL:0000047,2.25e-17,33;CL:0000031,2.25e-17,33;CL:0000404,2.25e-17,33;CL:0000393,1.36e-14,39;CL:0000211,1.36e-14,39;CL:0002319,3.61e-13,43;CL:0000221,7.47e-13,44;CL:0000133,7.47e-13,44;CL:0002321,8.85e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!3.70e-08!5;UBERON:0001003!3.70e-08!5;UBERON:0002097!3.70e-08!5;UBERON:0002199!3.70e-08!5;UBERON:0007029!3.70e-08!5;UBERON:0007376!3.70e-08!5;UBERON:0002416!3.70e-08!5;UBERON:0007383!3.70e-08!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,8.23e-22,3;UBERON:0002275,8.23e-22,3;UBERON:0000369,1.85e-14,5;UBERON:0002435,1.85e-14,5;UBERON:0000204,1.85e-14,5;UBERON:0010082,1.85e-14,5;UBERON:0002420,2.98e-09,8;UBERON:0007245,2.98e-09,8;UBERON:0010009,2.98e-09,8;UBERON:0010011,2.98e-09,8;UBERON:0000454,2.98e-09,8;UBERON:0001017,3.01e-09,73;UBERON:0001016,5.62e-09,75;UBERON:0002259,1.24e-08,1;UBERON:0002314,1.24e-08,1;UBERON:0004061,1.24e-08,1;UBERON:0006777,1.24e-08,1;UBERON:0005882,1.24e-08,1;UBERON:0004121,1.79e-08,95;UBERON:0000924,1.79e-08,95;UBERON:0006601,1.79e-08,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,4.7609188134483,1.26766280701236,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,1.91531007127782,1.0752457327937,9.89147157976454,8.69132614222892,8.85552729946492,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,1.9472783122627,0,0.125654352112864,0.173824320192276,0,0.62336413367868,0.973447578406546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0.32977250588296,0.161464426695906,0.904693873922338,2.02932984805332,0.984845398470368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0,0,0,0,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.468207537349412,0.128050304809739,0.17230640686684,0,0.463537303779422,0,0.412085900803307,0.147198920134397,0,0.354951612318675,0,0.436039249896986,0.282328141245992,0.25384382367503,0.548783918618318,0,0.407412341537585,0,0.355905054372522,0,0.409231043169689,0.929621047115796,0,1.24905288968973,0,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,4.7609188134483,1.26766280701236,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,1.91531007127782,1.0752457327937,9.89147157976454,8.69132614222892,8.85552729946492,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,1.9472783122627,0,0.125654352112864,0.173824320192276,0,0.62336413367868,0.973447578406546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0.32977250588296,0.161464426695906,0.904693873922338,2.02932984805332,0.984845398470368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0,0,0,0,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.468207537349412,0.128050304809739,0.17230640686684,0,0.463537303779422,0,0.412085900803307,0.147198920134397,0,0.354951612318675,0,0.436039249896986,0.282328141245992,0.25384382367503,0.548783918618318,0,0.407412341537585,0,0.355905054372522,0,0.409231043169689,0.929621047115796,0,1.24905288968973,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p26@Tcf7l2 | |short_description=p26@Tcf7l2 | ||
}} | }} |
Latest revision as of 23:57, 25 September 2015
Short description: | p26@Tcf7l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_26_at_Tcf7l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | -145bp_to_NM_001142924, uc008hyn.2_5end |
EntrezGene: | Tcf7l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.34e-25 | 23 |
neuroblast (sensu Vertebrata) | 3.34e-25 | 23 |
striatum neuron | 1.19e-23 | 3 |
granule cell | 1.10e-22 | 3 |
raphe nuclei neuron | 8.23e-22 | 3 |
neuron | 2.25e-17 | 33 |
neuronal stem cell | 2.25e-17 | 33 |
neuroblast | 2.25e-17 | 33 |
electrically signaling cell | 2.25e-17 | 33 |
electrically responsive cell | 1.36e-14 | 39 |
electrically active cell | 1.36e-14 | 39 |
neural cell | 3.61e-13 | 43 |
ectodermal cell | 7.47e-13 | 44 |
neurectodermal cell | 7.47e-13 | 44 |
embryonic cell | 8.85e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 8.23e-22 | 3 |
reticular formation | 8.23e-22 | 3 |
corpus striatum | 1.85e-14 | 5 |
striatum | 1.85e-14 | 5 |
ventral part of telencephalon | 1.85e-14 | 5 |
future corpus striatum | 1.85e-14 | 5 |
basal ganglion | 2.98e-09 | 8 |
nuclear complex of neuraxis | 2.98e-09 | 8 |
aggregate regional part of brain | 2.98e-09 | 8 |
collection of basal ganglia | 2.98e-09 | 8 |
cerebral subcortex | 2.98e-09 | 8 |
central nervous system | 3.01e-09 | 73 |
nervous system | 5.62e-09 | 75 |
corpora quadrigemina | 1.24e-08 | 1 |
midbrain tectum | 1.24e-08 | 1 |
neural tube mantle layer | 1.24e-08 | 1 |
tectal plate | 1.24e-08 | 1 |
neural tube alar plate | 1.24e-08 | 1 |
ectoderm-derived structure | 1.79e-08 | 95 |
ectoderm | 1.79e-08 | 95 |
presumptive ectoderm | 1.79e-08 | 95 |