FFCP PHASE1:Mm9::chr5:36100524..36100595,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=231148 | |EntrezGene=231148 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BL65,E9Q0W6,E9Q4K0,Q19VH2,Q3U409 | |UniProt=Q8BL65,E9Q0W6,E9Q4K0,Q19VH2,Q3U409 | ||
|association_with_transcript=0bp_to_ENSMUST00000054598,ENSMUST00000101280,ENSMUST00000114205,ENSMUST00000114206,ENSMUST00000114210,NM_001177696,NM_001177697,NM_001177698,NM_001177699,NM_001177700,NM_177678,uc008xeg.2,uc008xeh.2,uc008xei.2,uc012dve.1,uc012dvf.1,uc012dvg.1,uc012dvh.1_5end | |association_with_transcript=0bp_to_ENSMUST00000054598,ENSMUST00000101280,ENSMUST00000114205,ENSMUST00000114206,ENSMUST00000114210,NM_001177696,NM_001177697,NM_001177698,NM_001177699,NM_001177700,NM_177678,uc008xeg.2,uc008xeh.2,uc008xei.2,uc012dve.1,uc012dvf.1,uc012dvg.1,uc012dvh.1_5end | ||
|cluster_id=chr5:36100524..36100595,+ | |||
|description=CAGE_peak_1_at_Ablim2_5end | |description=CAGE_peak_1_at_Ablim2_5end | ||
|id=chr5:36100524..36100595,+ | |id=chr5:36100524..36100595,+ | ||
Latest revision as of 23:59, 25 September 2015
| Short description: | p1@Ablim2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Ablim2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1 |
| Association with transcript: | 0bp_to_ENSMUST00000054598, ENSMUST00000101280, ENSMUST00000114205, ENSMUST00000114206, ENSMUST00000114210, NM_001177696, NM_001177697, NM_001177698, NM_001177699, NM_001177700, NM_177678, uc008xeg.2, uc008xeh.2, uc008xei.2, uc012dve.1, uc012dvf.1, uc012dvg.1, uc012dvh.1_5end |
| EntrezGene: | Ablim2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuron | 4.14e-09 | 33 |
| neuronal stem cell | 4.14e-09 | 33 |
| neuroblast | 4.14e-09 | 33 |
| electrically signaling cell | 4.14e-09 | 33 |
| ectodermal cell | 3.95e-08 | 44 |
| neurectodermal cell | 3.95e-08 | 44 |
| neural cell | 4.93e-08 | 43 |
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 5.05e-20 | 73 |
| ectoderm-derived structure | 1.99e-19 | 95 |
| ectoderm | 1.99e-19 | 95 |
| presumptive ectoderm | 1.99e-19 | 95 |
| nervous system | 2.03e-18 | 75 |
| structure with developmental contribution from neural crest | 2.25e-13 | 92 |
| regional part of nervous system | 3.36e-13 | 54 |
| ecto-epithelium | 6.57e-13 | 73 |
| neural tube | 4.20e-12 | 52 |
| neural rod | 4.20e-12 | 52 |
| future spinal cord | 4.20e-12 | 52 |
| neural keel | 4.20e-12 | 52 |
| neurectoderm | 7.85e-12 | 64 |
| neural plate | 7.85e-12 | 64 |
| presumptive neural plate | 7.85e-12 | 64 |
| gray matter | 1.04e-10 | 34 |
| brain | 1.37e-09 | 47 |
| future brain | 1.37e-09 | 47 |
| regional part of brain | 3.79e-09 | 46 |
| brain grey matter | 2.94e-08 | 29 |
| regional part of telencephalon | 2.94e-08 | 29 |
| telencephalon | 2.94e-08 | 29 |
| occipital lobe | 8.11e-08 | 10 |
| visual cortex | 8.11e-08 | 10 |
| neocortex | 8.11e-08 | 10 |
| anterior neural tube | 2.66e-07 | 40 |
| regional part of forebrain | 8.69e-07 | 39 |
| forebrain | 8.69e-07 | 39 |
| future forebrain | 8.69e-07 | 39 |
