FFCP PHASE1:Mm9::chr11:94871166..94871204,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=217125 | |EntrezGene=217125 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=883 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K070 | |UniProt=Q8K070 | ||
|association_with_transcript=0bp_to_ENSMUST00000055947,ENSMUST00000128512,NM_146025,uc007kzt.1_5end | |association_with_transcript=0bp_to_ENSMUST00000055947,ENSMUST00000128512,NM_146025,uc007kzt.1_5end | ||
|cluster_id=chr11:94871166..94871204,+ | |||
|description=CAGE_peak_2_at_Samd14_5end | |description=CAGE_peak_2_at_Samd14_5end | ||
|id=chr11:94871166..94871204,+ | |id=chr11:94871166..94871204,+ | ||
|ontology_enrichment_celltype=CL:0000117!4.17e-14!23;CL:0000337!4.17e-14!23;CL:0000540!3.22e-12!33;CL:0000047!3.22e-12!33;CL:0000031!3.22e-12!33;CL:0000404!3.22e-12!33;CL:0002319!4.02e-11!43;CL:0000221!8.49e-11!44;CL:0000133!8.49e-11!44;CL:0000393!1.84e-09!39;CL:0000211!1.84e-09!39;CL:0000055!2.85e-08!50 | |ontology_enrichment_celltype=CL:0000117!4.17e-14!23;CL:0000337!4.17e-14!23;CL:0000540!3.22e-12!33;CL:0000047!3.22e-12!33;CL:0000031!3.22e-12!33;CL:0000404!3.22e-12!33;CL:0002319!4.02e-11!43;CL:0000221!8.49e-11!44;CL:0000133!8.49e-11!44;CL:0000393!1.84e-09!39;CL:0000211!1.84e-09!39;CL:0000055!2.85e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.35e-14,23;CL:0000337,3.35e-14,23;CL:0000540,2.68e-12,33;CL:0000047,2.68e-12,33;CL:0000031,2.68e-12,33;CL:0000404,2.68e-12,33;CL:0002319,4.22e-11,43;CL:0000221,8.91e-11,44;CL:0000133,8.91e-11,44;CL:0000393,2.13e-09,39;CL:0000211,2.13e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.07e-22!73;UBERON:0005743!4.07e-22!73;UBERON:0000073!1.03e-20!75;UBERON:0001016!1.03e-20!75;UBERON:0002346!8.24e-19!71;UBERON:0003075!8.24e-19!71;UBERON:0007284!8.24e-19!71;UBERON:0001049!2.22e-18!52;UBERON:0005068!2.22e-18!52;UBERON:0006241!2.22e-18!52;UBERON:0007135!2.22e-18!52;UBERON:0000033!2.57e-18!63;UBERON:0003056!2.86e-17!49;UBERON:0004121!3.02e-17!102;UBERON:0000924!3.02e-17!102;UBERON:0006601!3.02e-17!102;UBERON:0000955!2.11e-16!50;UBERON:0006238!2.11e-16!50;UBERON:0002616!7.12e-16!49;UBERON:0003080!5.72e-14!40;UBERON:0000153!1.63e-13!94;UBERON:0002780!2.04e-13!39;UBERON:0001890!2.04e-13!39;UBERON:0006240!2.04e-13!39;UBERON:0002020!3.37e-13!34;UBERON:0007811!2.32e-12!86;UBERON:0002791!4.14e-10!29;UBERON:0003528!4.14e-10!29;UBERON:0001893!4.14e-10!29;UBERON:0000468!3.96e-09!333;UBERON:0000922!8.44e-08!328 | |ontology_enrichment_uberon=UBERON:0001017!4.07e-22!73;UBERON:0005743!4.07e-22!73;UBERON:0000073!1.03e-20!75;UBERON:0001016!1.03e-20!75;UBERON:0002346!8.24e-19!71;UBERON:0003075!8.24e-19!71;UBERON:0007284!8.24e-19!71;UBERON:0001049!2.22e-18!52;UBERON:0005068!2.22e-18!52;UBERON:0006241!2.22e-18!52;UBERON:0007135!2.22e-18!52;UBERON:0000033!2.57e-18!63;UBERON:0003056!2.86e-17!49;UBERON:0004121!3.02e-17!102;UBERON:0000924!3.02e-17!102;UBERON:0006601!3.02e-17!102;UBERON:0000955!2.11e-16!50;UBERON:0006238!2.11e-16!50;UBERON:0002616!7.12e-16!49;UBERON:0003080!5.72e-14!40;UBERON:0000153!1.63e-13!94;UBERON:0002780!2.04e-13!39;UBERON:0001890!2.04e-13!39;UBERON:0006240!2.04e-13!39;UBERON:0002020!3.37e-13!34;UBERON:0007811!2.32e-12!86;UBERON:0002791!4.14e-10!29;UBERON:0003528!4.14e-10!29;UBERON:0001893!4.14e-10!29;UBERON:0000468!3.96e-09!333;UBERON:0000922!8.44e-08!328 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.83e-22,73;UBERON:0002346,2.77e-21,64;UBERON:0003075,2.77e-21,64;UBERON:0007284,2.77e-21,64;UBERON:0001016,9.37e-21,75;UBERON:0000073,2.79e-19,54;UBERON:0004121,1.38e-18,95;UBERON:0000924,1.38e-18,95;UBERON:0006601,1.38e-18,95;UBERON:0001049,1.65e-18,52;UBERON:0005068,1.65e-18,52;UBERON:0006241,1.65e-18,52;UBERON:0007135,1.65e-18,52;UBERON:0003056,2.17e-17,49;UBERON:0010371,4.03e-17,73;UBERON:0000955,2.24e-15,47;UBERON:0006238,2.24e-15,47;UBERON:0002616,7.46e-15,46;UBERON:0003080,4.60e-14,40;UBERON:0002780,1.65e-13,39;UBERON:0001890,1.65e-13,39;UBERON:0006240,1.65e-13,39;UBERON:0002020,2.75e-13,34;UBERON:0010314,3.04e-12,92;UBERON:0003528,3.56e-10,29;UBERON:0002791,3.56e-10,29;UBERON:0001893,3.56e-10,29;UBERON:0000922,5.68e-08,320 | |||
|phase1_expression=13.9329496981171,1.04692622291808,0.454999239389536,0,0,1.34303417529512,0.467225281191051,0,0,0,0,0,0,0,15.6561588053361,13.1608923803387,29.3815988813822,0.630924330716475,0.411343300817216,0.42438965179803,3.656861476496,0,0.261199789138935,0.95995453676044,0.22940928106717,2.29692785646008,0.430761996159075,1.29282739611533,0,0.252030129759931,0.665191531965914,1.90509202037889,2.46025915033828,0,0,0,0.204169356262369,0.418531630736908,0,0.523523743973798,0,0,0,6.6725313527056,6.2853697356099,8.44315059943735,14.0830441982647,6.75877984779384,9.66619204031676,7.58276606389705,3.3596741190087,18.6878333674463,0,0,0,1.02903774414379,0.85960031981627,2.06268836910977,41.8795073979367,39.1453324661304,44.3681982454325,4.06613438482959,1.77858959222228,0.899899717281399,0.988866362566974,0.7104801149461,10.4860038681442,24.974189845901,41.4758449233911,46.3070368477699,43.9579169224388,39.4198358477249,39.3146002893872,35.8898041699815,37.8589610522034,36.7687514644008,16.5173821499083,13.1517958227743,18.8936035905179,37.5875920031052,33.6674528456868,33.3384557156326,13.1216009530649,15.1945904708554,20.6277634498694,48.9083451886288,37.0166370077668,36.1614924901083,0.605809546665472,2.34271836331035,3.18850937571846,0,0,0,0,0,1.96622188184453,7.15807354827843,4.67614808285164,5.3000936176551,5.21120653173718,5.13305909657271,12.7402619853323,28.4426681261332,0.216491041011214,0.253359865475099,0,2.05530983494308,10.8753911131812,3.85949561568544,7.98032503124225,7.30717147949139,6.45723392316964,4.97384713823654,6.82014501387088,1.75933227861546,1.23597483867187,1.73519228303894,10.6153266233985,6.95597454773859,8.17113618303456,5.81850303762267,1.86391761218122,16.6885054296582,10.0534419270458,0.510914110417183,1.31796636956512,0.599902730993408,0.762421362438388,23.0677584683427,16.0125210986519,58.6805824367077,15.2965401769203,11.2514801225345,18.4931359658008,14.1149898868949,19.5531578592607,4.72746488318353,3.53811861807145,12.2056276414155,11.7108398666433,8.73627996847197,17.2859644613135,16.7282347797644,21.2273877352143,24.0853794135518,22.9569225171336,28.1986674105527,7.11374376678379,10.4008344092301,15.3077478022636,11.1789823538063,13.9023624612799,11.8405736617537,9.05441400194951,9.35461054046918,0,0,0,6.21377317606506,8.91199027928165,6.66229627405755,8.28606574548236,7.67380503814875,6.94202007993202,2.79040733700489,5.36546802799238,3.61972561338225,6.08871444679878,3.77585167381919,2.1888578577381,1.90059983652932,1.09775057645525,0.134206418760372,22.7113144449257,65.4473334732249,0.330418782983798,0,12.3707185310436,9.52170354627798,10.9537342123779,8.26902450955704,8.00560957841533,6.27744566171445,0.474529061544512,4.44687177754829,3.51869292320377,5.76973768919337,4.67913809085888,1.79763881730844,1.29682829924817,0.995706366271836,9.10405924574792,9.71112357182695,16.9061603509621,8.96065842519383,9.89157684554891,6.8031745293609,7.8413306034079,2.06654207171443,3.45397201251025,0.987177311374404,0,23.8588501174014,19.6558995113203,22.7110733508702,22.7203335955123,19.5353499399458,10.9489116266011,9.20627639842594,2.7562988551756,4.66754402419738,4.31304619582064,2.23284568601102,0,0.505157755894224,0.538192240565737,0,0.554259570499814,6.63219941196697,11.2445833744998,9.50572480341054,7.97946844180907,7.20276906999808,6.42717830392237,3.51240566144038,8.98520321405289,11.0732344824387,8.77001227616179,2.13022309130459,1.55416483679306,1.15719246865209,0,0,0,0.827810238914197,12.5229460190478,12.5416504653657,5.40985319743029,1.26235463602186,5.04813151066011,7.02789739733949,8.61693590931196,7.64700153448166,9.35754431146055,14.4369030702305,9.71545684019746,5.84511715822624,8.69633111482352,20.5645642509957,5.96148357874728,16.738166744722,20.360869919197,5.77395430403874,1.32745138339963,8.98288353773431,6.65111825322452,4.71512699389745,5.61073596473468,6.7635732547664,5.68542244970086,7.27067458955011,4.9909632973861,1.26414703174326,2.10837217149998,0,11.234506989875,14.0447653344422,15.264324686365,15.2179294872431,14.7192393923087,15.6964559489822,18.4294903074375,17.6589670486468,4.22409074514679,2.96564899209348,2.20528398054962,4.61681508236144,5.48979050766079,5.30753739367772,3.10368094408155,1.31312719796049,0,15.7611506708933,11.2774781326583,11.144890870014,14.0747840800981,20.3437933565066,18.0436380591753,15.0993594316305,1.86976272993241,0.979660166265606,1.10559979043539,3.81868247206045,12.4952717464548,11.1825706919767,11.6645768087545,8.36353184057875,4.80397640241591,8.09186078308924,5.78574190077352,1.83229159388821,0.777689839750757,2.4853572523477,0.56369293868419,7.027277664067,6.6183396182839,11.4726201122988,11.4952242895181,11.1511042823914,13.6134396829075,8.07267186032491,5.03324853243412,1.20792060413003,0.864090018773596,5.68820017130721,13.3798642091508,16.8445969750317,12.6023198288461,9.48841487037652,11.5235185773134,6.37035882455835,7.53216588590344,5.45218829719997,6.17275133905499,2.92395936896837,4.0932309910696,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| ||
|short_description=p2@Samd14 | |short_description=p2@Samd14 | ||
}} | }} |
Latest revision as of 00:30, 26 September 2015
Short description: | p2@Samd14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Samd14_5end |
Coexpression cluster: | MCL_coexpression_mm9:883 |
Association with transcript: | 0bp_to_ENSMUST00000055947, ENSMUST00000128512, NM_146025, uc007kzt.1_5end |
EntrezGene: | Samd14 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.35e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.35e-14 | 23 |
neuron | 2.68e-12 | 33 |
neuronal stem cell | 2.68e-12 | 33 |
neuroblast | 2.68e-12 | 33 |
electrically signaling cell | 2.68e-12 | 33 |
neural cell | 4.22e-11 | 43 |
ectodermal cell | 8.91e-11 | 44 |
neurectodermal cell | 8.91e-11 | 44 |
electrically responsive cell | 2.13e-09 | 39 |
electrically active cell | 2.13e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.83e-22 | 73 |
neurectoderm | 2.77e-21 | 64 |
neural plate | 2.77e-21 | 64 |
presumptive neural plate | 2.77e-21 | 64 |
nervous system | 9.37e-21 | 75 |
regional part of nervous system | 2.79e-19 | 54 |
ectoderm-derived structure | 1.38e-18 | 95 |
ectoderm | 1.38e-18 | 95 |
presumptive ectoderm | 1.38e-18 | 95 |
neural tube | 1.65e-18 | 52 |
neural rod | 1.65e-18 | 52 |
future spinal cord | 1.65e-18 | 52 |
neural keel | 1.65e-18 | 52 |
pre-chordal neural plate | 2.17e-17 | 49 |
ecto-epithelium | 4.03e-17 | 73 |
brain | 2.24e-15 | 47 |
future brain | 2.24e-15 | 47 |
regional part of brain | 7.46e-15 | 46 |
anterior neural tube | 4.60e-14 | 40 |
regional part of forebrain | 1.65e-13 | 39 |
forebrain | 1.65e-13 | 39 |
future forebrain | 1.65e-13 | 39 |
gray matter | 2.75e-13 | 34 |
structure with developmental contribution from neural crest | 3.04e-12 | 92 |
brain grey matter | 3.56e-10 | 29 |
regional part of telencephalon | 3.56e-10 | 29 |
telencephalon | 3.56e-10 | 29 |
embryo | 5.68e-08 | 320 |