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FFCP PHASE1:Mm9::chr8:98202130..98202159,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=234593
|EntrezGene=234593
|HGNC=
|HGNC=
|MCL_coexpression_id=360
|MCL_coexpression_id=360
|TSSclassifier=NA
|UniProt=E9Q168
|UniProt=E9Q168
|association_with_transcript=0bp_to_ENSMUST00000166358_5end
|association_with_transcript=0bp_to_ENSMUST00000166358_5end
|cluster_id=chr8:98202130..98202159,+
|description=CAGE_peak_4_at_Ndrg4_5end
|description=CAGE_peak_4_at_Ndrg4_5end
|id=chr8:98202130..98202159,+
|id=chr8:98202130..98202159,+
|ontology_enrichment_celltype=CL:0000117!6.48e-15!23;CL:0000337!6.48e-15!23;CL:0000540!5.04e-08!33;CL:0000047!5.04e-08!33;CL:0000031!5.04e-08!33;CL:0000404!5.04e-08!33
|ontology_enrichment_celltype=CL:0000117!6.48e-15!23;CL:0000337!6.48e-15!23;CL:0000540!5.04e-08!33;CL:0000047!5.04e-08!33;CL:0000031!5.04e-08!33;CL:0000404!5.04e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,3.43e-25,23;CL:0000337,3.43e-25,23;CL:0000540,1.35e-15,33;CL:0000047,1.35e-15,33;CL:0000031,1.35e-15,33;CL:0000404,1.35e-15,33;CL:0000393,3.03e-12,39;CL:0000211,3.03e-12,39;CL:0002319,1.51e-10,43;CL:0000221,3.56e-10,44;CL:0000133,3.56e-10,44;CL:0002609,1.79e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!6.66e-24!52;UBERON:0005068!6.66e-24!52;UBERON:0006241!6.66e-24!52;UBERON:0007135!6.66e-24!52;UBERON:0000955!4.54e-23!50;UBERON:0006238!4.54e-23!50;UBERON:0002616!3.42e-22!49;UBERON:0000033!1.16e-21!63;UBERON:0000073!4.37e-21!75;UBERON:0001016!4.37e-21!75;UBERON:0001017!2.29e-20!73;UBERON:0005743!2.29e-20!73;UBERON:0002020!3.24e-20!34;UBERON:0002346!3.13e-19!71;UBERON:0003075!3.13e-19!71;UBERON:0007284!3.13e-19!71;UBERON:0003080!3.71e-19!40;UBERON:0003056!9.52e-19!49;UBERON:0002780!1.86e-18!39;UBERON:0001890!1.86e-18!39;UBERON:0006240!1.86e-18!39;UBERON:0002791!6.07e-17!29;UBERON:0003528!6.07e-17!29;UBERON:0001893!6.07e-17!29;UBERON:0004121!2.05e-16!102;UBERON:0000924!2.05e-16!102;UBERON:0006601!2.05e-16!102;UBERON:0007811!6.51e-14!86;UBERON:0000956!4.95e-12!21;UBERON:0001869!4.95e-12!21;UBERON:0000203!4.95e-12!21;UBERON:0000153!9.52e-12!94;UBERON:0002619!1.33e-09!17;UBERON:0000025!1.41e-09!114;UBERON:0004111!3.18e-09!122;UBERON:0002021!4.60e-09!10;UBERON:0000411!4.60e-09!10;UBERON:0001950!4.60e-09!10
|ontology_enrichment_uberon=UBERON:0001049!6.66e-24!52;UBERON:0005068!6.66e-24!52;UBERON:0006241!6.66e-24!52;UBERON:0007135!6.66e-24!52;UBERON:0000955!4.54e-23!50;UBERON:0006238!4.54e-23!50;UBERON:0002616!3.42e-22!49;UBERON:0000033!1.16e-21!63;UBERON:0000073!4.37e-21!75;UBERON:0001016!4.37e-21!75;UBERON:0001017!2.29e-20!73;UBERON:0005743!2.29e-20!73;UBERON:0002020!3.24e-20!34;UBERON:0002346!3.13e-19!71;UBERON:0003075!3.13e-19!71;UBERON:0007284!3.13e-19!71;UBERON:0003080!3.71e-19!40;UBERON:0003056!9.52e-19!49;UBERON:0002780!1.86e-18!39;UBERON:0001890!1.86e-18!39;UBERON:0006240!1.86e-18!39;UBERON:0002791!6.07e-17!29;UBERON:0003528!6.07e-17!29;UBERON:0001893!6.07e-17!29;UBERON:0004121!2.05e-16!102;UBERON:0000924!2.05e-16!102;UBERON:0006601!2.05e-16!102;UBERON:0007811!6.51e-14!86;UBERON:0000956!4.95e-12!21;UBERON:0001869!4.95e-12!21;UBERON:0000203!4.95e-12!21;UBERON:0000153!9.52e-12!94;UBERON:0002619!1.33e-09!17;UBERON:0000025!1.41e-09!114;UBERON:0004111!3.18e-09!122;UBERON:0002021!4.60e-09!10;UBERON:0000411!4.60e-09!10;UBERON:0001950!4.60e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.73e-39,54;UBERON:0002020,1.04e-36,34;UBERON:0001049,4.76e-36,52;UBERON:0005068,4.76e-36,52;UBERON:0006241,4.76e-36,52;UBERON:0007135,4.76e-36,52;UBERON:0001017,1.71e-34,73;UBERON:0001016,3.19e-33,75;UBERON:0003528,1.82e-30,29;UBERON:0002791,1.82e-30,29;UBERON:0001893,1.82e-30,29;UBERON:0000955,2.80e-30,47;UBERON:0006238,2.80e-30,47;UBERON:0002616,9.13e-29,46;UBERON:0002346,1.12e-28,64;UBERON:0003075,1.12e-28,64;UBERON:0007284,1.12e-28,64;UBERON:0003080,4.86e-26,40;UBERON:0002780,8.32e-25,39;UBERON:0001890,8.32e-25,39;UBERON:0006240,8.32e-25,39;UBERON:0004121,1.00e-24,95;UBERON:0000924,1.00e-24,95;UBERON:0006601,1.00e-24,95;UBERON:0010371,1.07e-23,73;UBERON:0010314,5.27e-23,92;UBERON:0000956,8.80e-23,21;UBERON:0001869,8.80e-23,21;UBERON:0000203,8.80e-23,21;UBERON:0003056,4.30e-21,49;UBERON:0002619,3.96e-18,17;UBERON:0000025,3.50e-16,114;UBERON:0002021,8.35e-16,10;UBERON:0000411,8.35e-16,10;UBERON:0001950,8.35e-16,10;UBERON:0004111,2.64e-14,122;UBERON:0003076,4.22e-10,12;UBERON:0003057,4.22e-10,12;UBERON:0002420,1.16e-08,8;UBERON:0007245,1.16e-08,8;UBERON:0010009,1.16e-08,8;UBERON:0010011,1.16e-08,8;UBERON:0000454,1.16e-08,8;UBERON:0002240,2.32e-08,6;UBERON:0005174,2.32e-08,6;UBERON:0001137,2.32e-08,6;UBERON:0001948,3.17e-07,5;UBERON:0002315,3.17e-07,5;UBERON:0000483,5.11e-07,174;UBERON:0000119,8.31e-07,176
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.58937230525805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,3.84401275633236,4.7609188134483,5.07065122804943,0,0,0,0,0,0.299600110518405,0,3.21437798156281,4.05017814995072,2.73422449756797,7.42692559449889,5.07997644188711,3.79721477566358,1.53352753629178,7.35375029288017,47.3498288297371,43.0306329347083,30.8749131845049,4.2203612073662,3.11057988248193,0.52091337055676,16.7509799400829,9.56696437053856,12.3766580699216,7.95497180778903,6.69146899755784,6.15118171223492,0.605809546665472,0.68014404096107,0,0,0,0,0,0,2.38755514223978,0,0,0,0.281686839553361,0,0,0,0,0,0,1.59857431606684,0,1.92974780784272,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0.969750506270444,0,1.75668478206928,1.67557365450764,0,0.11981512450592,0,0.127070227073065,10.6351353977424,93.3301229749998,10.4293112253677,62.229106628835,65.9745879912253,38.6485762880782,54.9997881799698,0.101839363850316,1.7416975885413,4.54900965180614,0.420883711772948,0,0,0.360124259610698,0.452114453507145,0.204109497453984,0.2562274405697,0.374806898238915,1.81092359517311,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0.621377317606506,0.938104239924385,0.900310307305074,1.65721314909647,0.983821158737019,2.1597395804233,1.39520366850245,1.07309360559848,1.28441876603886,0.987359099480883,0.492502392237286,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,46.0534987355439,3.08713837137853,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0.295220295959204,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,16.215609588767,12.0728037189969,0,0,0,0,0,0,0,0,0,0,0,115.996995228272,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.388076051348264,0.214337035031592,0.532020700926821,0.356737635204141,0.493647061806363,0.608929898229199,0.23467170806371,0,0.661585194164886,0,0,0.0603129249281559,0.238744688006273,0,0,7.23158677840988,0,0,0,0,0,0,0.339956859987711,0.419854356970974,0.276399947608848,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0.165458490457098,0.388902376688095,0.387479470433193,0.337912250981556,0,0.2604087696879,0.629156066554265,0,0.288030006257865,0.316011120628178,0,0,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,38.4031252979605,35.4450432110526,38.956894913879,34.8861960157686,44.5303637850917,49.8559972277202,43.2014400148356,49.5353323546642,57.549085940994,56.4358739809484,0.207574695168353,0.399024873401031,0.341467211508268,0.243106717068294,0.838452650511929,1.10306105070008,0.222246727801615,1.23621034343337,1.60459604795908,1.51618327058278,0,0.754505365544305,0.655490552289177,0.960377286073039,0.574354689556133,0.952587382566147,0.927074607558844,0.964546102318525,0.412085900803307,0.441596760403192,0,0.354951612318675,0.238436189947321,0.872078499793971,0.564656282491984,0.676916863133412,0.548783918618318,0,0.407412341537585,0,1.18635018124174,0.591026894253381,0,1.08455788830176,0.964533054905707,2.24829520144151,0.701794825336225,0.859484216193193,0.57386499620653,0.882365676478062,0.695603506861264
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.58937230525805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,3.84401275633236,4.7609188134483,5.07065122804943,0,0,0,0,0,0.299600110518405,0,3.21437798156281,4.05017814995072,2.73422449756797,7.42692559449889,5.07997644188711,3.79721477566358,1.53352753629178,7.35375029288017,47.3498288297371,43.0306329347083,30.8749131845049,4.2203612073662,3.11057988248193,0.52091337055676,16.7509799400829,9.56696437053856,12.3766580699216,7.95497180778903,6.69146899755784,6.15118171223492,0.605809546665472,0.68014404096107,0,0,0,0,0,0,2.38755514223978,0,0,0,0.281686839553361,0,0,0,0,0,0,1.59857431606684,0,1.92974780784272,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0.969750506270444,0,1.75668478206928,1.67557365450764,0,0.11981512450592,0,0.127070227073065,10.6351353977424,93.3301229749998,10.4293112253677,62.229106628835,65.9745879912253,38.6485762880782,54.9997881799698,0.101839363850316,1.7416975885413,4.54900965180614,0.420883711772948,0,0,0.360124259610698,0.452114453507145,0.204109497453984,0.2562274405697,0.374806898238915,1.81092359517311,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0.621377317606506,0.938104239924385,0.900310307305074,1.65721314909647,0.983821158737019,2.1597395804233,1.39520366850245,1.07309360559848,1.28441876603886,0.987359099480883,0.492502392237286,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,46.0534987355439,3.08713837137853,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0.295220295959204,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,16.215609588767,12.0728037189969,0,0,0,0,0,0,0,0,0,0,0,115.996995228272,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.388076051348264,0.214337035031592,0.532020700926821,0.356737635204141,0.493647061806363,0.608929898229199,0.23467170806371,0,0.661585194164886,0,0,0.0603129249281559,0.238744688006273,0,0,7.23158677840988,0,0,0,0,0,0,0.339956859987711,0.419854356970974,0.276399947608848,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0.165458490457098,0.388902376688095,0.387479470433193,0.337912250981556,0,0.2604087696879,0.629156066554265,0,0.288030006257865,0.316011120628178,0,0,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,38.4031252979605,35.4450432110526,38.956894913879,34.8861960157686,44.5303637850917,49.8559972277202,43.2014400148356,49.5353323546642,57.549085940994,56.4358739809484,0.207574695168353,0.399024873401031,0.341467211508268,0.243106717068294,0.838452650511929,1.10306105070008,0.222246727801615,1.23621034343337,1.60459604795908,1.51618327058278,0,0.754505365544305,0.655490552289177,0.960377286073039,0.574354689556133,0.952587382566147,0.927074607558844,0.964546102318525,0.412085900803307,0.441596760403192,0,0.354951612318675,0.238436189947321,0.872078499793971,0.564656282491984,0.676916863133412,0.548783918618318,0,0.407412341537585,0,1.18635018124174,0.591026894253381,0,1.08455788830176,0.964533054905707,2.24829520144151,0.701794825336225,0.859484216193193,0.57386499620653,0.882365676478062,0.695603506861264
|short_description=p4@Ndrg4
|short_description=p4@Ndrg4
}}
}}

Latest revision as of 01:07, 26 September 2015

Short description:p4@Ndrg4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Ndrg4_5end
Coexpression cluster:MCL_coexpression_mm9:360
Association with transcript: 0bp_to_ENSMUST00000166358_5end
EntrezGene:Ndrg4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Ndrg4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D347.35
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F343.03
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D730.87
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.11
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.15
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A410.64
corpus striatum, adult.CNhs10487.19-21D893.33
corpus striatum, neonate N00.CNhs11226.630-43F110.43
cortex, adult.CNhs10473.12-14D562.23
cortex, neonate N30.CNhs11107.1392-42F265.97
diencephalon, adult.CNhs10482.20-12F238.65
diencephalon, neonate N30.CNhs11201.1388-42B255.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E846.05
hippocampus, neonate N00.CNhs11228.627-43G13.09
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C216.22
medulla oblongata, neonate N30.CNhs11200.1396-42A312.07
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I9116.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C97.23
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A138.40
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A235.45
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A338.96
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D734.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A444.53
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A549.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A643.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A749.54
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A857.55
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A956.44
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.73e-3954
gray matter1.04e-3634
neural tube4.76e-3652
neural rod4.76e-3652
future spinal cord4.76e-3652
neural keel4.76e-3652
central nervous system1.71e-3473
nervous system3.19e-3375
brain grey matter1.82e-3029
regional part of telencephalon1.82e-3029
telencephalon1.82e-3029
brain2.80e-3047
future brain2.80e-3047
regional part of brain9.13e-2946
neurectoderm1.12e-2864
neural plate1.12e-2864
presumptive neural plate1.12e-2864
anterior neural tube4.86e-2640
regional part of forebrain8.32e-2539
forebrain8.32e-2539
future forebrain8.32e-2539
ectoderm-derived structure1.00e-2495
ectoderm1.00e-2495
presumptive ectoderm1.00e-2495
ecto-epithelium1.07e-2373
structure with developmental contribution from neural crest5.27e-2392
cerebral cortex8.80e-2321
cerebral hemisphere8.80e-2321
pallium8.80e-2321
pre-chordal neural plate4.30e-2149
regional part of cerebral cortex3.96e-1817
tube3.50e-16114
occipital lobe8.35e-1610
visual cortex8.35e-1610
neocortex8.35e-1610
anatomical conduit2.64e-14122
posterior neural tube4.22e-1012
chordal neural plate4.22e-1012
basal ganglion1.16e-088
nuclear complex of neuraxis1.16e-088
aggregate regional part of brain1.16e-088
collection of basal ganglia1.16e-088
cerebral subcortex1.16e-088
spinal cord2.32e-086
dorsal region element2.32e-086
dorsum2.32e-086
regional part of spinal cord3.17e-075
gray matter of spinal cord3.17e-075
epithelium5.11e-07174
cell layer8.31e-07176
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