FFCP PHASE1:Mm9::chr10:4424212..4424215,+: Difference between revisions
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{{FFCP|EntrezGene=56533|HGNC=|MCL_coexpression_id=20|UniProt=F8WH97,Q9QZB0|association_with_transcript=37bp_to_ENSMUST00000019909,ENSMUST00000117676_5end|description=CAGE_peak_3_at_Rgs17_5end|id=chr10:4424212..4424215,+|ontology_enrichment_celltype=CL:0000117!3.65e-07!23;CL:0000337!3.65e-07!23|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.40e-13!71;UBERON:0003075!1.40e-13!71;UBERON:0007284!1.40e-13!71;UBERON:0001049!3.76e-13!52;UBERON:0005068!3.76e-13!52;UBERON:0006241!3.76e-13!52;UBERON:0007135!3.76e-13!52;UBERON:0002020!1.27e-12!34;UBERON:0000073!4.58e-12!75;UBERON:0001016!4.58e-12!75;UBERON:0001017!5.87e-12!73;UBERON:0005743!5.87e-12!73;UBERON:0000955!1.49e-10!50;UBERON:0006238!1.49e-10!50;UBERON:0004121!2.48e-10!102;UBERON:0000924!2.48e-10!102;UBERON:0006601!2.48e-10!102;UBERON:0002616!7.63e-10!49;UBERON:0000033!1.01e-09!63;UBERON:0002791!1.20e-08!29;UBERON:0003528!1.20e-08!29;UBERON:0001893!1.20e-08!29;UBERON:0003056!4.51e-08!49;UBERON:0003080!1.26e-07!40;UBERON:0002240!1.60e-07!6;UBERON:0005174!1.60e-07!6;UBERON:0001137!1.60e-07!6;UBERON:0003076!2.20e-07!12;UBERON:0003057!2.20e-07!12;UBERON:0002780!7.40e-07!39;UBERON:0001890!7.40e-07!39;UBERON:0006240!7.40e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0002259,1.20e-12,1;UBERON:0002314,1.20e-12,1;UBERON:0004061,1.20e-12,1;UBERON:0006777,1.20e-12,1;UBERON:0005882,1.20e-12,1;UBERON:0001851,1.55e-12,1;UBERON:0005889,1.55e-12,1;UBERON:0002950,4.91e-12,4;UBERON:0001891,4.91e-12,4;UBERON:0009616,4.91e-12,4;UBERON:0010286,4.91e-12,4;UBERON:0002021,2.52e-10,10;UBERON:0000411,2.52e-10,10;UBERON:0001950,2.52e-10,10;UBERON:0001049,2.80e-10,52;UBERON:0005068,2.80e-10,52;UBERON:0006241,2.80e-10,52;UBERON:0007135,2.80e-10,52;UBERON:0002616,1.32e-08,46;UBERON:0000955,2.01e-08,47;UBERON:0006238,2.01e-08,47;UBERON:0002346,2.46e-08,64;UBERON:0003075,2.46e-08,64;UBERON:0007284,2.46e-08,64;UBERON:0000073,2.50e-07,54;UBERON:0010371,2.72e-07,73;UBERON:0001017,2.72e-07,73;UBERON:0001016,4.29e-07,75;UBERON:0003080,5.40e-07,40;UBERON:0001896,7.59e-07,2;UBERON:0002298,7.59e-07,2;UBERON:0005290,7.59e-07,2;UBERON:0010096,7.59e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0.191690942036473,0,0,0.893811366596314,0.46081959976873,0.263772575460388,0.0914876436024097,0,0.837548997004143,0,1.22238598221448,0.294628585473668,0.854230084794618,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24685959107234,0.915001205637253,0.376963056338593,0.869121600961382,2.04572365864264,0.83115217823824,0.162241263067758,0,0,0,0,0.130120442962704,0,0,0,0.136072998302656,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.465067889500816,0,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0,0,0.420579897128254,0.205809224758569,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,0.586058432961016,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0.604647113929502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0.2604087696879,0.209718688851422,0,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,1.14579102687879,0.68741272937475,0,0,0.675022500231806,0,1.35942722695261,1.03552062350364,0,0,0,0,0,0,0,0.412070114477788,0,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0.17230640686684,0,0,0,0.412085900803307,0,0,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p3@Rgs17}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56533 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=F8WH97,Q9QZB0 | |||
|association_with_transcript=37bp_to_ENSMUST00000019909,ENSMUST00000117676_5end | |||
|cluster_id=chr10:4424212..4424215,+ | |||
|description=CAGE_peak_3_at_Rgs17_5end | |||
|id=chr10:4424212..4424215,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.65e-07!23;CL:0000337!3.65e-07!23 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.40e-13!71;UBERON:0003075!1.40e-13!71;UBERON:0007284!1.40e-13!71;UBERON:0001049!3.76e-13!52;UBERON:0005068!3.76e-13!52;UBERON:0006241!3.76e-13!52;UBERON:0007135!3.76e-13!52;UBERON:0002020!1.27e-12!34;UBERON:0000073!4.58e-12!75;UBERON:0001016!4.58e-12!75;UBERON:0001017!5.87e-12!73;UBERON:0005743!5.87e-12!73;UBERON:0000955!1.49e-10!50;UBERON:0006238!1.49e-10!50;UBERON:0004121!2.48e-10!102;UBERON:0000924!2.48e-10!102;UBERON:0006601!2.48e-10!102;UBERON:0002616!7.63e-10!49;UBERON:0000033!1.01e-09!63;UBERON:0002791!1.20e-08!29;UBERON:0003528!1.20e-08!29;UBERON:0001893!1.20e-08!29;UBERON:0003056!4.51e-08!49;UBERON:0003080!1.26e-07!40;UBERON:0002240!1.60e-07!6;UBERON:0005174!1.60e-07!6;UBERON:0001137!1.60e-07!6;UBERON:0003076!2.20e-07!12;UBERON:0003057!2.20e-07!12;UBERON:0002780!7.40e-07!39;UBERON:0001890!7.40e-07!39;UBERON:0006240!7.40e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002259,1.20e-12,1;UBERON:0002314,1.20e-12,1;UBERON:0004061,1.20e-12,1;UBERON:0006777,1.20e-12,1;UBERON:0005882,1.20e-12,1;UBERON:0001851,1.55e-12,1;UBERON:0005889,1.55e-12,1;UBERON:0002950,4.91e-12,4;UBERON:0001891,4.91e-12,4;UBERON:0009616,4.91e-12,4;UBERON:0010286,4.91e-12,4;UBERON:0002021,2.52e-10,10;UBERON:0000411,2.52e-10,10;UBERON:0001950,2.52e-10,10;UBERON:0001049,2.80e-10,52;UBERON:0005068,2.80e-10,52;UBERON:0006241,2.80e-10,52;UBERON:0007135,2.80e-10,52;UBERON:0002616,1.32e-08,46;UBERON:0000955,2.01e-08,47;UBERON:0006238,2.01e-08,47;UBERON:0002346,2.46e-08,64;UBERON:0003075,2.46e-08,64;UBERON:0007284,2.46e-08,64;UBERON:0000073,2.50e-07,54;UBERON:0010371,2.72e-07,73;UBERON:0001017,2.72e-07,73;UBERON:0001016,4.29e-07,75;UBERON:0003080,5.40e-07,40;UBERON:0001896,7.59e-07,2;UBERON:0002298,7.59e-07,2;UBERON:0005290,7.59e-07,2;UBERON:0010096,7.59e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0.191690942036473,0,0,0.893811366596314,0.46081959976873,0.263772575460388,0.0914876436024097,0,0.837548997004143,0,1.22238598221448,0.294628585473668,0.854230084794618,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24685959107234,0.915001205637253,0.376963056338593,0.869121600961382,2.04572365864264,0.83115217823824,0.162241263067758,0,0,0,0,0.130120442962704,0,0,0,0.136072998302656,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.465067889500816,0,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0,0,0.420579897128254,0.205809224758569,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,0.586058432961016,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0.604647113929502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0.2604087696879,0.209718688851422,0,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,1.14579102687879,0.68741272937475,0,0,0.675022500231806,0,1.35942722695261,1.03552062350364,0,0,0,0,0,0,0,0.412070114477788,0,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0.17230640686684,0,0,0,0.412085900803307,0,0,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Rgs17 | |||
}} |
Latest revision as of 01:10, 26 September 2015
Short description: | p3@Rgs17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rgs17_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 37bp_to_ENSMUST00000019909, ENSMUST00000117676_5end |
EntrezGene: | Rgs17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpora quadrigemina | 1.20e-12 | 1 |
midbrain tectum | 1.20e-12 | 1 |
neural tube mantle layer | 1.20e-12 | 1 |
tectal plate | 1.20e-12 | 1 |
neural tube alar plate | 1.20e-12 | 1 |
cortex | 1.55e-12 | 1 |
zygote cortex | 1.55e-12 | 1 |
regional part of midbrain | 4.91e-12 | 4 |
midbrain | 4.91e-12 | 4 |
presumptive midbrain | 4.91e-12 | 4 |
midbrain neural tube | 4.91e-12 | 4 |
occipital lobe | 2.52e-10 | 10 |
visual cortex | 2.52e-10 | 10 |
neocortex | 2.52e-10 | 10 |
neural tube | 2.80e-10 | 52 |
neural rod | 2.80e-10 | 52 |
future spinal cord | 2.80e-10 | 52 |
neural keel | 2.80e-10 | 52 |
regional part of brain | 1.32e-08 | 46 |
brain | 2.01e-08 | 47 |
future brain | 2.01e-08 | 47 |
neurectoderm | 2.46e-08 | 64 |
neural plate | 2.46e-08 | 64 |
presumptive neural plate | 2.46e-08 | 64 |
regional part of nervous system | 2.50e-07 | 54 |
ecto-epithelium | 2.72e-07 | 73 |
central nervous system | 2.72e-07 | 73 |
nervous system | 4.29e-07 | 75 |
anterior neural tube | 5.40e-07 | 40 |
medulla oblongata | 7.59e-07 | 2 |
brainstem | 7.59e-07 | 2 |
myelencephalon | 7.59e-07 | 2 |
future myelencephalon | 7.59e-07 | 2 |