FFCP PHASE1:Mm9::chr19:59533429..59533470,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13797 | |EntrezGene=13797 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1174 | |||
|TSSclassifier=NA | |||
|UniProt=G3X9A6,Q04744 | |UniProt=G3X9A6,Q04744 | ||
|association_with_transcript=249bp_to_ENSMUST00000062216,NM_010132,uc008ibl.1_5end | |association_with_transcript=249bp_to_ENSMUST00000062216,NM_010132,uc008ibl.1_5end | ||
|cluster_id=chr19:59533429..59533470,+ | |||
|description=CAGE_peak_4_at_Emx2_5end | |description=CAGE_peak_4_at_Emx2_5end | ||
|id=chr19:59533429..59533470,+ | |id=chr19:59533429..59533470,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!4.29e-10!14;UBERON:0003918!4.29e-10!14;UBERON:0005095!4.29e-10!14;UBERON:0007687!4.29e-10!14;UBERON:0003056!2.94e-09!49;UBERON:0005156!7.28e-09!26;UBERON:0000990!7.28e-09!26;UBERON:0003133!8.39e-09!24;UBERON:0001008!1.18e-08!17;UBERON:0006554!4.06e-08!16;UBERON:0000033!1.56e-07!63;UBERON:0003080!2.89e-07!40;UBERON:0002780!4.54e-07!39;UBERON:0001890!4.54e-07!39;UBERON:0006240!4.54e-07!39;UBERON:0002791!6.02e-07!29;UBERON:0003528!6.02e-07!29;UBERON:0001893!6.02e-07!29 | |ontology_enrichment_uberon=UBERON:0002113!4.29e-10!14;UBERON:0003918!4.29e-10!14;UBERON:0005095!4.29e-10!14;UBERON:0007687!4.29e-10!14;UBERON:0003056!2.94e-09!49;UBERON:0005156!7.28e-09!26;UBERON:0000990!7.28e-09!26;UBERON:0003133!8.39e-09!24;UBERON:0001008!1.18e-08!17;UBERON:0006554!4.06e-08!16;UBERON:0000033!1.56e-07!63;UBERON:0003080!2.89e-07!40;UBERON:0002780!4.54e-07!39;UBERON:0001890!4.54e-07!39;UBERON:0006240!4.54e-07!39;UBERON:0002791!6.02e-07!29;UBERON:0003528!6.02e-07!29;UBERON:0001893!6.02e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.75e-14,14;UBERON:0003918,1.75e-14,14;UBERON:0011143,1.75e-14,14;UBERON:0005095,1.75e-14,14;UBERON:0007687,1.75e-14,14;UBERON:0005156,1.67e-12,26;UBERON:0000990,1.67e-12,26;UBERON:0003133,5.18e-12,24;UBERON:0001008,2.45e-11,19;UBERON:0006554,1.80e-10,18;UBERON:0000991,3.14e-09,18;UBERON:0005564,3.14e-09,18;UBERON:0000489,1.73e-08,21;UBERON:0004176,4.89e-08,17;UBERON:0009196,4.89e-08,17;UBERON:0009117,4.89e-08,17;UBERON:0000474,7.55e-08,9;UBERON:0002102,1.31e-07,7;UBERON:0004710,1.31e-07,7;UBERON:0005419,1.31e-07,7;UBERON:0005417,1.31e-07,7;UBERON:0005729,1.31e-07,7 | |||
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|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.52065396829272,3.30384153891027,0,0.65407546914134,0.659058548203415,0.777719596297134,0.699932108126813,0,0,0,0,0,0,0,2.63011399117477,3.1739458756322,2.53532561402472,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,3.62913643079672,3.51015439662396,2.10324961351382,0,0,1.10241719293459,0.383381884072945,0.919218786610021,0,0.510749352340751,0.307213066512487,1.31886287730194,1.00636407962651,1.04182674111352,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340860645156116,0.779358013808606,0,1.26759077799012,0,2.54805239706646,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0.485300549842228,0,0,0,0,0,0,0,0,0,0.449371918214468,0.915001205637253,0.376963056338593,2.08589184230732,1.79000820131231,0.20778804455956,0.973447578406546,3.7680564624617,1.24406970610093,4.54900965180614,0,2.99277018814219,1.60931473103431,1.44049703844279,0.753524089178575,0.544291993210623,0.2562274405697,0.281105173679186,0.517406741478031,1.94011193639558,4.16033376369202,7.9178005873777,4.3839146485515,6.67313398141435,0.696504333044333,1.64625709126355,14.927570011387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,9.2614151141356,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,6.06937283049861,3.42745537829186,3.38123207019241,2.64746726198909,2.13347735884388,2.52488951605147,1.7706230394792,1.32849133181642,2.04098346193787,1.23397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0.819674726883377,0.757412781613119,0,0,0,0,0,0,0,0,0,0.321321316421807,2.98074178937364,7.65682095769198,7.98146100832523,6.43383479592888,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,1.26042765821917,0.646793418913773,0.428674070063185,0,0,0.164549020602121,0,0.938686832254841,0,0,0.32977250588296,0.322928853391811,0.301564624640779,0.238744688006273,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0.209088296014469,0,0,0,0,0,0,0,7.47582730219894,4.96375471371293,2.13896307178452,1.16243841129958,1.18269287843545,1.76035857968631,0.5208175393758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19060208267009,6.04400360081975,1.50057865355346,0.501572104035363,1.6942555278512,0,0,1.20297227640581,0,1.5107877947794,0.675022500231806,0.45032120322422,0.906284817968409,0,3.21740777510948,3.19219898720825,1.87806966329548,0.972426868273176,0.838452650511929,0.919217542250071,0.222246727801615,0.824140228955577,0,0.252697211763798,0.50695859978048,1.32038438970253,1.12369808963859,0.640251524048693,0.861532034334199,0,0.695305955669133,0.578727661391115,0.412085900803307,1.17759136107518,0.342869252385415,0.354951612318675,0.953744759789284,1.16277133305863,1.03520318456864,0.761531471025089,1.28049581010941,1.05227884575137,0.407412341537585,0,0.593175090620871,0.29551344712669,0.818462086339379,0,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0.765153328275374,0,0 | ||
|short_description=p4@Emx2 | |short_description=p4@Emx2 | ||
}} | }} |
Latest revision as of 02:10, 26 September 2015
Short description: | p4@Emx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Emx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1174 |
Association with transcript: | 249bp_to_ENSMUST00000062216, NM_010132, uc008ibl.1_5end |
EntrezGene: | Emx2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 1.75e-14 | 14 |
kidney mesenchyme | 1.75e-14 | 14 |
upper urinary tract | 1.75e-14 | 14 |
kidney rudiment | 1.75e-14 | 14 |
kidney field | 1.75e-14 | 14 |
reproductive structure | 1.67e-12 | 26 |
reproductive system | 1.67e-12 | 26 |
reproductive organ | 5.18e-12 | 24 |
renal system | 2.45e-11 | 19 |
urinary system structure | 1.80e-10 | 18 |
gonad | 3.14e-09 | 18 |
gonad primordium | 3.14e-09 | 18 |
cavitated compound organ | 1.73e-08 | 21 |
external genitalia | 4.89e-08 | 17 |
indifferent external genitalia | 4.89e-08 | 17 |
indifferent gonad | 4.89e-08 | 17 |
female reproductive system | 7.55e-08 | 9 |
forelimb | 1.31e-07 | 7 |
pectoral appendage | 1.31e-07 | 7 |
pectoral appendage bud | 1.31e-07 | 7 |
forelimb bud | 1.31e-07 | 7 |
forelimb/pectoral fin field | 1.31e-07 | 7 |