FFCP PHASE1:Mm9::chr9:103382666..103382678,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=107993 | |EntrezGene=107993 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=57 | |||
|TSSclassifier=NA | |||
|UniProt=Q6NVD9 | |UniProt=Q6NVD9 | ||
|association_with_transcript=-8bp_to_ENSMUST00000124310,NM_001002896,uc009rgv.1_5end | |association_with_transcript=-8bp_to_ENSMUST00000124310,NM_001002896,uc009rgv.1_5end | ||
|cluster_id=chr9:103382666..103382678,- | |||
|description=CAGE_peak_4_at_Bfsp2_5end | |description=CAGE_peak_4_at_Bfsp2_5end | ||
|id=chr9:103382666..103382678,- | |id=chr9:103382666..103382678,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002611,6.17e-11,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.93e-21!71;UBERON:0003075!1.93e-21!71;UBERON:0007284!1.93e-21!71;UBERON:0004121!3.90e-21!102;UBERON:0000924!3.90e-21!102;UBERON:0006601!3.90e-21!102;UBERON:0000073!3.73e-17!75;UBERON:0001016!3.73e-17!75;UBERON:0001017!1.15e-16!73;UBERON:0005743!1.15e-16!73;UBERON:0000970!3.19e-16!9;UBERON:0000019!3.19e-16!9;UBERON:0000047!3.19e-16!9;UBERON:0004088!3.19e-16!9;UBERON:0002104!3.19e-16!9;UBERON:0001456!3.19e-16!9;UBERON:0003072!3.19e-16!9;UBERON:0003071!3.19e-16!9;UBERON:0004128!3.19e-16!9;UBERON:0000033!4.08e-16!63;UBERON:0003056!6.79e-14!49;UBERON:0001444!7.74e-13!11;UBERON:0001049!1.33e-12!52;UBERON:0005068!1.33e-12!52;UBERON:0006241!1.33e-12!52;UBERON:0007135!1.33e-12!52;UBERON:0000020!1.43e-11!12;UBERON:0001032!1.43e-11!12;UBERON:0004456!1.43e-11!12;UBERON:0003076!2.18e-11!12;UBERON:0003057!2.18e-11!12;UBERON:0005085!1.68e-10!13;UBERON:0002021!9.59e-10!10;UBERON:0000411!9.59e-10!10;UBERON:0001950!9.59e-10!10;UBERON:0007811!1.30e-09!86;UBERON:0002616!1.06e-08!49;UBERON:0000955!2.02e-08!50;UBERON:0006238!2.02e-08!50;UBERON:0000153!3.92e-08!94;UBERON:0002020!4.40e-07!34;UBERON:0002240!7.48e-07!6;UBERON:0005174!7.48e-07!6;UBERON:0001137!7.48e-07!6 | |ontology_enrichment_uberon=UBERON:0002346!1.93e-21!71;UBERON:0003075!1.93e-21!71;UBERON:0007284!1.93e-21!71;UBERON:0004121!3.90e-21!102;UBERON:0000924!3.90e-21!102;UBERON:0006601!3.90e-21!102;UBERON:0000073!3.73e-17!75;UBERON:0001016!3.73e-17!75;UBERON:0001017!1.15e-16!73;UBERON:0005743!1.15e-16!73;UBERON:0000970!3.19e-16!9;UBERON:0000019!3.19e-16!9;UBERON:0000047!3.19e-16!9;UBERON:0004088!3.19e-16!9;UBERON:0002104!3.19e-16!9;UBERON:0001456!3.19e-16!9;UBERON:0003072!3.19e-16!9;UBERON:0003071!3.19e-16!9;UBERON:0004128!3.19e-16!9;UBERON:0000033!4.08e-16!63;UBERON:0003056!6.79e-14!49;UBERON:0001444!7.74e-13!11;UBERON:0001049!1.33e-12!52;UBERON:0005068!1.33e-12!52;UBERON:0006241!1.33e-12!52;UBERON:0007135!1.33e-12!52;UBERON:0000020!1.43e-11!12;UBERON:0001032!1.43e-11!12;UBERON:0004456!1.43e-11!12;UBERON:0003076!2.18e-11!12;UBERON:0003057!2.18e-11!12;UBERON:0005085!1.68e-10!13;UBERON:0002021!9.59e-10!10;UBERON:0000411!9.59e-10!10;UBERON:0001950!9.59e-10!10;UBERON:0007811!1.30e-09!86;UBERON:0002616!1.06e-08!49;UBERON:0000955!2.02e-08!50;UBERON:0006238!2.02e-08!50;UBERON:0000153!3.92e-08!94;UBERON:0002020!4.40e-07!34;UBERON:0002240!7.48e-07!6;UBERON:0005174!7.48e-07!6;UBERON:0001137!7.48e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,6.54e-36,9;UBERON:0000019,6.54e-36,9;UBERON:0000047,6.54e-36,9;UBERON:0010312,6.54e-36,9;UBERON:0004088,6.54e-36,9;UBERON:0002104,6.54e-36,9;UBERON:0001456,6.54e-36,9;UBERON:0003072,6.54e-36,9;UBERON:0004128,6.54e-36,9;UBERON:0003071,6.54e-36,9;UBERON:0001444,3.15e-29,11;UBERON:0000020,1.01e-26,12;UBERON:0001032,1.01e-26,12;UBERON:0004456,1.01e-26,12;UBERON:0000033,1.35e-24,13;UBERON:0005085,1.35e-24,13;UBERON:0002346,1.67e-15,64;UBERON:0003075,1.67e-15,64;UBERON:0007284,1.67e-15,64;UBERON:0010371,2.54e-13,73;UBERON:0003056,5.19e-13,49;UBERON:0004121,7.03e-13,95;UBERON:0000924,7.03e-13,95;UBERON:0006601,7.03e-13,95;UBERON:0002256,6.17e-11,2;UBERON:0010314,4.17e-10,92;UBERON:0007811,2.94e-08,36;UBERON:0000153,9.55e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,1.53687322128622,0,0,0,4.28476476605705,1.54607978666129,0,0,0,0,0.383062014255563,0,0,0,0,0.279182999001381,0,0,0.294628585473668,0.284743361598206,0,0,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.449371918214468,0,0.125654352112864,0,1.27857728665165,0.41557608911912,1.78465389374533,0,0,0,0.631325567659422,2.34216797332867,6.89706313300419,4.68161537493908,6.0281927134286,6.32739442107349,3.58718416797579,5.528401749024,3.62184719034622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,1.87538698547525,0,0,0,0.390438744296638,0.215423397732799,0.716906393857656,1.11399337041197,0.566153061577665,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,1.14579102687879,1.03111909406213,0,0.755393897389701,1.35004500046361,0.45032120322422,0,0.51776031175182,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0,0.192075457214608,0.114870937911227,0,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0,0,0,0,0,0,0,0.118635018124174,0,0.409231043169689,0.154936841185966,0,0,0.467863216890817,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,1.53687322128622,0,0,0,4.28476476605705,1.54607978666129,0,0,0,0,0.383062014255563,0,0,0,0,0.279182999001381,0,0,0.294628585473668,0.284743361598206,0,0,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.449371918214468,0,0.125654352112864,0,1.27857728665165,0.41557608911912,1.78465389374533,0,0,0,0.631325567659422,2.34216797332867,6.89706313300419,4.68161537493908,6.0281927134286,6.32739442107349,3.58718416797579,5.528401749024,3.62184719034622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,1.87538698547525,0,0,0,0.390438744296638,0.215423397732799,0.716906393857656,1.11399337041197,0.566153061577665,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,1.14579102687879,1.03111909406213,0,0.755393897389701,1.35004500046361,0.45032120322422,0,0.51776031175182,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0,0.192075457214608,0.114870937911227,0,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0,0,0,0,0,0,0,0.118635018124174,0,0.409231043169689,0.154936841185966,0,0,0.467863216890817,0,0,0,0 | ||
|short_description=p4@Bfsp2 | |short_description=p4@Bfsp2 | ||
}} | }} |
Latest revision as of 02:12, 26 September 2015
Short description: | p4@Bfsp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Bfsp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | -8bp_to_ENSMUST00000124310, NM_001002896, uc009rgv.1_5end |
EntrezGene: | Bfsp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 6.17e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
eye | 6.54e-36 | 9 |
camera-type eye | 6.54e-36 | 9 |
simple eye | 6.54e-36 | 9 |
immature eye | 6.54e-36 | 9 |
ocular region | 6.54e-36 | 9 |
visual system | 6.54e-36 | 9 |
face | 6.54e-36 | 9 |
optic cup | 6.54e-36 | 9 |
optic vesicle | 6.54e-36 | 9 |
eye primordium | 6.54e-36 | 9 |
subdivision of head | 3.15e-29 | 11 |
sense organ | 1.01e-26 | 12 |
sensory system | 1.01e-26 | 12 |
entire sense organ system | 1.01e-26 | 12 |
head | 1.35e-24 | 13 |
ectodermal placode | 1.35e-24 | 13 |
neurectoderm | 1.67e-15 | 64 |
neural plate | 1.67e-15 | 64 |
presumptive neural plate | 1.67e-15 | 64 |
ecto-epithelium | 2.54e-13 | 73 |
pre-chordal neural plate | 5.19e-13 | 49 |
ectoderm-derived structure | 7.03e-13 | 95 |
ectoderm | 7.03e-13 | 95 |
presumptive ectoderm | 7.03e-13 | 95 |
dorsal horn of spinal cord | 6.17e-11 | 2 |
structure with developmental contribution from neural crest | 4.17e-10 | 92 |
craniocervical region | 2.94e-08 | 36 |
anterior region of body | 9.55e-07 | 43 |