FFCP PHASE1:Mm9::chr7:148106756..148106780,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=101613 | |EntrezGene=101613 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=412 | |MCL_coexpression_id=412 | ||
|TSSclassifier=NA | |||
|UniProt=E9QNS0,Q91WS2 | |UniProt=E9QNS0,Q91WS2 | ||
|association_with_transcript=-20bp_to_ENSMUST00000106045,NM_001081389,uc009kiu.1,uc009kiv.2_5end | |association_with_transcript=-20bp_to_ENSMUST00000106045,NM_001081389,uc009kiu.1,uc009kiv.2_5end | ||
|cluster_id=chr7:148106756..148106780,+ | |||
|description=CAGE_peak_2_at_Nlrp6_5end | |description=CAGE_peak_2_at_Nlrp6_5end | ||
|id=chr7:148106756..148106780,+ | |id=chr7:148106756..148106780,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.43e-10!9;CL:0002251!1.43e-10!9;CL:0000239!3.53e-07!6;CL:0000677!3.53e-07!6;CL:0000212!3.53e-07!6;CL:0000584!3.53e-07!6 | |ontology_enrichment_celltype=CL:0002563!1.43e-10!9;CL:0002251!1.43e-10!9;CL:0000239!3.53e-07!6;CL:0000677!3.53e-07!6;CL:0000212!3.53e-07!6;CL:0000584!3.53e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.92e-13,9;CL:0002251,6.92e-13,9;CL:0000239,1.26e-08,6;CL:0000677,1.26e-08,6;CL:0000584,1.26e-08,6;CL:0000075,3.16e-07,7;CL:0002076,9.34e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.56e-22!43;UBERON:0005409!2.85e-21!59;UBERON:0000344!2.31e-16!15;UBERON:0001242!1.84e-14!13;UBERON:0000060!1.84e-14!13;UBERON:0001262!1.84e-14!13;UBERON:0004786!1.84e-14!13;UBERON:0003350!1.43e-10!9;UBERON:0004808!1.43e-10!9;UBERON:0001277!1.43e-10!9;UBERON:0004923!3.58e-08!24;UBERON:0000485!4.14e-08!11;UBERON:0001007!1.64e-07!128;UBERON:0001555!1.64e-07!128;UBERON:0007026!1.64e-07!128;UBERON:0004119!3.51e-07!130;UBERON:0000925!3.51e-07!130;UBERON:0006595!3.51e-07!130 | |ontology_enrichment_uberon=UBERON:0000160!7.56e-22!43;UBERON:0005409!2.85e-21!59;UBERON:0000344!2.31e-16!15;UBERON:0001242!1.84e-14!13;UBERON:0000060!1.84e-14!13;UBERON:0001262!1.84e-14!13;UBERON:0004786!1.84e-14!13;UBERON:0003350!1.43e-10!9;UBERON:0004808!1.43e-10!9;UBERON:0001277!1.43e-10!9;UBERON:0004923!3.58e-08!24;UBERON:0000485!4.14e-08!11;UBERON:0001007!1.64e-07!128;UBERON:0001555!1.64e-07!128;UBERON:0007026!1.64e-07!128;UBERON:0004119!3.51e-07!130;UBERON:0000925!3.51e-07!130;UBERON:0006595!3.51e-07!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.47e-35,31;UBERON:0005409,1.71e-26,47;UBERON:0000344,3.61e-20,15;UBERON:0001242,8.93e-18,13;UBERON:0001262,8.93e-18,13;UBERON:0004786,8.93e-18,13;UBERON:0003350,6.92e-13,9;UBERON:0004808,6.92e-13,9;UBERON:0001277,6.92e-13,9;UBERON:0004923,8.68e-11,24;UBERON:0000485,4.40e-10,11;UBERON:0001007,2.07e-08,116;UBERON:0001555,2.07e-08,116;UBERON:0007026,2.07e-08,116;UBERON:0004119,4.37e-08,118;UBERON:0000925,4.37e-08,118;UBERON:0006595,4.37e-08,118;UBERON:0004921,2.70e-07,114 | |||
|phase1_expression=0,30.3608604646244,24.5699589270349,71.3815538684119,77.1379424117375,28.0358384092856,34.3410581675423,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0,0,0,45.7578329189143,29.8232065387321,30.4342940980961,27.5687677541808,33.8289835316846,58.3371897731068,57.4628695852642,18.8470934057009,0,0,0,91.565963461154,76.1354675741895,81.87191186121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.08977724289854,0,0,0,0,0,0,0,0,0,0,9.36307813696292,0,0,1.04091196059682,0,0,0,0,0,0,0,0,0,0,0,55.9175283654366,0,0,62.3315214708963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710234206755631,0,0,0,0,0,0,0,0,0,0,0,0,0,41.9631854389423,55.0057178660172,0,0.232236671860439,6.31450560478257,27.6306428733979,37.3595113659382,43.7518940058886,64.0614233085091,43.4805240471389,28.1495433856302,28.4507755018846,35.2884997685607,71.9055526923377,41.0662294761919,51.1793072263724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0.604647113929502,0,0,0.307435147943927,16.7978390559344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,56.547282306191,0,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0.406638934253697,3.78018692876304,2.50905955217362,4.14888871117737,0.404593039154462,0.495920734352016,0.26175594198403,41.7360213999573,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,23.7188501889492,17.3581517608558,1.42912905275575,0,0,0,0,0.201932899896295,0,0,0,0,0.467507608726276,0,0,0,0,0,0,1.28206136987086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0.628839487883947,1.83843508450014,1.33348036680969,3.5025959730612,0.962757628775446,2.02157769411038,2.02783439912192,1.32038438970253,2.06011316433741,1.60062881012173,0.976402972245426,0.476293691283074,1.73826488917283,1.73618298417335,2.88460130562315,2.64958056241915,2.40008476669791,1.59728225543404,2.38436189947321,1.88950341622027,1.41164070622996,1.86152137361688,1.82927972872773,1.31534855718921,1.49384525230448,1.12228454331548,2.13543032623513,2.9551344712669,1.22769312950907,1.54936841185966,1.54325288784913,0,2.8071793013449,0.644613162144895,0,0.220591419119515,0 | |phase1_expression=0,30.3608604646244,24.5699589270349,71.3815538684119,77.1379424117375,28.0358384092856,34.3410581675423,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0,0,0,45.7578329189143,29.8232065387321,30.4342940980961,27.5687677541808,33.8289835316846,58.3371897731068,57.4628695852642,18.8470934057009,0,0,0,91.565963461154,76.1354675741895,81.87191186121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.08977724289854,0,0,0,0,0,0,0,0,0,0,9.36307813696292,0,0,1.04091196059682,0,0,0,0,0,0,0,0,0,0,0,55.9175283654366,0,0,62.3315214708963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710234206755631,0,0,0,0,0,0,0,0,0,0,0,0,0,41.9631854389423,55.0057178660172,0,0.232236671860439,6.31450560478257,27.6306428733979,37.3595113659382,43.7518940058886,64.0614233085091,43.4805240471389,28.1495433856302,28.4507755018846,35.2884997685607,71.9055526923377,41.0662294761919,51.1793072263724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0.604647113929502,0,0,0.307435147943927,16.7978390559344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,56.547282306191,0,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0.406638934253697,3.78018692876304,2.50905955217362,4.14888871117737,0.404593039154462,0.495920734352016,0.26175594198403,41.7360213999573,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,23.7188501889492,17.3581517608558,1.42912905275575,0,0,0,0,0.201932899896295,0,0,0,0,0.467507608726276,0,0,0,0,0,0,1.28206136987086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0.628839487883947,1.83843508450014,1.33348036680969,3.5025959730612,0.962757628775446,2.02157769411038,2.02783439912192,1.32038438970253,2.06011316433741,1.60062881012173,0.976402972245426,0.476293691283074,1.73826488917283,1.73618298417335,2.88460130562315,2.64958056241915,2.40008476669791,1.59728225543404,2.38436189947321,1.88950341622027,1.41164070622996,1.86152137361688,1.82927972872773,1.31534855718921,1.49384525230448,1.12228454331548,2.13543032623513,2.9551344712669,1.22769312950907,1.54936841185966,1.54325288784913,0,2.8071793013449,0.644613162144895,0,0.220591419119515,0 | ||
|short_description=p2@Nlrp6 | |short_description=p2@Nlrp6 | ||
}} | }} |
Latest revision as of 03:08, 26 September 2015
Short description: | p2@Nlrp6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nlrp6_5end |
Coexpression cluster: | MCL_coexpression_mm9:412 |
Association with transcript: | -20bp_to_ENSMUST00000106045, NM_001081389, uc009kiu.1, uc009kiv.2_5end |
EntrezGene: | Nlrp6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.92e-13 | 9 |
epithelial cell of alimentary canal | 6.92e-13 | 9 |
brush border epithelial cell | 1.26e-08 | 6 |
gut absorptive cell | 1.26e-08 | 6 |
enterocyte | 1.26e-08 | 6 |
columnar/cuboidal epithelial cell | 3.16e-07 | 7 |
endo-epithelial cell | 9.34e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.47e-35 | 31 |
gastrointestinal system | 1.71e-26 | 47 |
mucosa | 3.61e-20 | 15 |
intestinal mucosa | 8.93e-18 | 13 |
wall of intestine | 8.93e-18 | 13 |
gastrointestinal system mucosa | 8.93e-18 | 13 |
epithelium of mucosa | 6.92e-13 | 9 |
gastrointestinal system epithelium | 6.92e-13 | 9 |
intestinal epithelium | 6.92e-13 | 9 |
organ component layer | 8.68e-11 | 24 |
simple columnar epithelium | 4.40e-10 | 11 |
digestive system | 2.07e-08 | 116 |
digestive tract | 2.07e-08 | 116 |
primitive gut | 2.07e-08 | 116 |
endoderm-derived structure | 4.37e-08 | 118 |
endoderm | 4.37e-08 | 118 |
presumptive endoderm | 4.37e-08 | 118 |
subdivision of digestive tract | 2.70e-07 | 114 |