FFCP PHASE1:Mm9::chr19:6497412..6497449,+: Difference between revisions
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{{FFCP|EntrezGene=18190|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-221bp_to_ENSMUST00000148391_5end|description=CAGE_peak_4_at_Nrxn2_5end|id=chr19:6497412..6497449,+|ontology_enrichment_celltype=CL:0000117!2.29e-14!23;CL:0000337!2.29e-14!23;CL:0000221!2.08e-13!44;CL:0000133!2.08e-13!44;CL:0002319!2.25e-13!43;CL:0000540!3.42e-11!33;CL:0000047!3.42e-11!33;CL:0000031!3.42e-11!33;CL:0000404!3.42e-11!33;CL:0000055!2.91e-10!50;CL:0000393!1.24e-08!39;CL:0000211!1.24e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.33e-19,23;CL:0000337,1.33e-19,23;CL:0002319,1.36e-13,43;CL:0000221,4.93e-13,44;CL:0000133,4.93e-13,44;CL:0000540,3.93e-12,33;CL:0000047,3.93e-12,33;CL:0000031,3.93e-12,33;CL:0000404,3.93e-12,33;CL:0000393,5.96e-09,39;CL:0000211,5.96e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.00e-32!73;UBERON:0005743!3.00e-32!73;UBERON:0000073!7.67e-32!75;UBERON:0001016!7.67e-32!75;UBERON:0004121!1.08e-30!102;UBERON:0000924!1.08e-30!102;UBERON:0006601!1.08e-30!102;UBERON:0001049!7.68e-29!52;UBERON:0005068!7.68e-29!52;UBERON:0006241!7.68e-29!52;UBERON:0007135!7.68e-29!52;UBERON:0000033!2.69e-28!63;UBERON:0002346!1.20e-27!71;UBERON:0003075!1.20e-27!71;UBERON:0007284!1.20e-27!71;UBERON:0000955!1.79e-27!50;UBERON:0006238!1.79e-27!50;UBERON:0002616!1.11e-26!49;UBERON:0003056!6.78e-23!49;UBERON:0002020!1.30e-21!34;UBERON:0003080!1.37e-21!40;UBERON:0002780!5.54e-21!39;UBERON:0001890!5.54e-21!39;UBERON:0006240!5.54e-21!39;UBERON:0002791!2.45e-18!29;UBERON:0003528!2.45e-18!29;UBERON:0001893!2.45e-18!29;UBERON:0000956!1.32e-13!21;UBERON:0001869!1.32e-13!21;UBERON:0000203!1.32e-13!21;UBERON:0007811!1.47e-12!86;UBERON:0002619!2.07e-11!17;UBERON:0000153!1.29e-10!94;UBERON:0002021!2.56e-08!10;UBERON:0000411!2.56e-08!10;UBERON:0001950!2.56e-08!10;UBERON:0003076!1.17e-07!12;UBERON:0003057!1.17e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.03e-42,54;UBERON:0001049,4.65e-40,52;UBERON:0005068,4.65e-40,52;UBERON:0006241,4.65e-40,52;UBERON:0007135,4.65e-40,52;UBERON:0001017,6.64e-40,73;UBERON:0001016,3.35e-38,75;UBERON:0002346,1.05e-37,64;UBERON:0003075,1.05e-37,64;UBERON:0007284,1.05e-37,64;UBERON:0000955,2.72e-35,47;UBERON:0006238,2.72e-35,47;UBERON:0002616,3.43e-34,46;UBERON:0004121,2.13e-32,95;UBERON:0000924,2.13e-32,95;UBERON:0006601,2.13e-32,95;UBERON:0010371,8.52e-32,73;UBERON:0003056,3.14e-30,49;UBERON:0002020,7.77e-30,34;UBERON:0003080,8.34e-30,40;UBERON:0002780,6.01e-29,39;UBERON:0001890,6.01e-29,39;UBERON:0006240,6.01e-29,39;UBERON:0003528,3.28e-25,29;UBERON:0002791,3.28e-25,29;UBERON:0001893,3.28e-25,29;UBERON:0010314,1.26e-21,92;UBERON:0000956,1.57e-18,21;UBERON:0001869,1.57e-18,21;UBERON:0000203,1.57e-18,21;UBERON:0002619,1.96e-15,17;UBERON:0002021,4.39e-11,10;UBERON:0000411,4.39e-11,10;UBERON:0001950,4.39e-11,10;UBERON:0003076,3.73e-10,12;UBERON:0003057,3.73e-10,12;UBERON:0000025,8.73e-09,114;UBERON:0004111,9.43e-08,122;UBERON:0002420,9.43e-08,8;UBERON:0007245,9.43e-08,8;UBERON:0010009,9.43e-08,8;UBERON:0010011,9.43e-08,8;UBERON:0000454,9.43e-08,8|phase1_expression=4.32401887182944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01755411891312,0.397163804803541,0.783599367416806,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,3.9119567217402,1.74420125104357,2.85592037554813,1.94429899074283,0.699932108126813,1.43752564364972,0.167782606057736,0,0.336093799142464,0.257259436035947,0.573066879877513,0,24.4802917640113,15.340738398889,25.9870875437533,0,0,0,0,0,5.09320187881288,9.60545763303886,11.509546966241,8.77538599155989,11.9885227970288,19.7099179238624,15.4607978666129,11.7591167246356,11.0222291670972,8.27296907949019,17.6185409599022,19.4084753889485,19.0472101237742,22.9482140650537,23.4208367622169,26.5665818983948,11.4465029590566,9.00420176050688,14.8214300343506,24.1595440088408,21.4981238006645,19.9447407033072,0.075726193333184,0.755715601067855,0,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0.34255163915718,0.258937883647172,1.33597925158342,0.173485326766136,0.304465478312141,0.691846491768175,0.60289056221049,0.470354828542819,0.376999773989026,0,0.578397427679647,0,0,0.220841518460394,0,0,19.9090941967852,19.6879904404648,0.255457055208591,0,0,0,16.4769703345305,18.3000241127451,12.4397808591736,35.1125126788398,29.1515621356577,13.5062228963714,14.7639549391659,0.305518091550949,0,0,1.05220927943237,0.260240885925407,0.459804208866946,2.88099407688559,1.65775299619287,2.17716797284249,2.562274405697,2.52994656311268,1.03481348295606,0,0.189106080167819,0.527853372491847,0.219195732427575,0,0,0,0.796137067273973,0,0,0,0,0.469052119962192,0.36012412292203,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.324275238183423,0.292399974850665,0.439100230582101,0,27.7582732104648,16.7734518178234,0,0,0.426576501070468,0.696710015581316,0.128867461322093,0.403367049246685,0.22237804384487,0.3804512522251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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18190 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-221bp_to_ENSMUST00000148391_5end | |||
|cluster_id=chr19:6497412..6497449,+ | |||
|description=CAGE_peak_4_at_Nrxn2_5end | |||
|id=chr19:6497412..6497449,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.29e-14!23;CL:0000337!2.29e-14!23;CL:0000221!2.08e-13!44;CL:0000133!2.08e-13!44;CL:0002319!2.25e-13!43;CL:0000540!3.42e-11!33;CL:0000047!3.42e-11!33;CL:0000031!3.42e-11!33;CL:0000404!3.42e-11!33;CL:0000055!2.91e-10!50;CL:0000393!1.24e-08!39;CL:0000211!1.24e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.33e-19,23;CL:0000337,1.33e-19,23;CL:0002319,1.36e-13,43;CL:0000221,4.93e-13,44;CL:0000133,4.93e-13,44;CL:0000540,3.93e-12,33;CL:0000047,3.93e-12,33;CL:0000031,3.93e-12,33;CL:0000404,3.93e-12,33;CL:0000393,5.96e-09,39;CL:0000211,5.96e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.00e-32!73;UBERON:0005743!3.00e-32!73;UBERON:0000073!7.67e-32!75;UBERON:0001016!7.67e-32!75;UBERON:0004121!1.08e-30!102;UBERON:0000924!1.08e-30!102;UBERON:0006601!1.08e-30!102;UBERON:0001049!7.68e-29!52;UBERON:0005068!7.68e-29!52;UBERON:0006241!7.68e-29!52;UBERON:0007135!7.68e-29!52;UBERON:0000033!2.69e-28!63;UBERON:0002346!1.20e-27!71;UBERON:0003075!1.20e-27!71;UBERON:0007284!1.20e-27!71;UBERON:0000955!1.79e-27!50;UBERON:0006238!1.79e-27!50;UBERON:0002616!1.11e-26!49;UBERON:0003056!6.78e-23!49;UBERON:0002020!1.30e-21!34;UBERON:0003080!1.37e-21!40;UBERON:0002780!5.54e-21!39;UBERON:0001890!5.54e-21!39;UBERON:0006240!5.54e-21!39;UBERON:0002791!2.45e-18!29;UBERON:0003528!2.45e-18!29;UBERON:0001893!2.45e-18!29;UBERON:0000956!1.32e-13!21;UBERON:0001869!1.32e-13!21;UBERON:0000203!1.32e-13!21;UBERON:0007811!1.47e-12!86;UBERON:0002619!2.07e-11!17;UBERON:0000153!1.29e-10!94;UBERON:0002021!2.56e-08!10;UBERON:0000411!2.56e-08!10;UBERON:0001950!2.56e-08!10;UBERON:0003076!1.17e-07!12;UBERON:0003057!1.17e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.03e-42,54;UBERON:0001049,4.65e-40,52;UBERON:0005068,4.65e-40,52;UBERON:0006241,4.65e-40,52;UBERON:0007135,4.65e-40,52;UBERON:0001017,6.64e-40,73;UBERON:0001016,3.35e-38,75;UBERON:0002346,1.05e-37,64;UBERON:0003075,1.05e-37,64;UBERON:0007284,1.05e-37,64;UBERON:0000955,2.72e-35,47;UBERON:0006238,2.72e-35,47;UBERON:0002616,3.43e-34,46;UBERON:0004121,2.13e-32,95;UBERON:0000924,2.13e-32,95;UBERON:0006601,2.13e-32,95;UBERON:0010371,8.52e-32,73;UBERON:0003056,3.14e-30,49;UBERON:0002020,7.77e-30,34;UBERON:0003080,8.34e-30,40;UBERON:0002780,6.01e-29,39;UBERON:0001890,6.01e-29,39;UBERON:0006240,6.01e-29,39;UBERON:0003528,3.28e-25,29;UBERON:0002791,3.28e-25,29;UBERON:0001893,3.28e-25,29;UBERON:0010314,1.26e-21,92;UBERON:0000956,1.57e-18,21;UBERON:0001869,1.57e-18,21;UBERON:0000203,1.57e-18,21;UBERON:0002619,1.96e-15,17;UBERON:0002021,4.39e-11,10;UBERON:0000411,4.39e-11,10;UBERON:0001950,4.39e-11,10;UBERON:0003076,3.73e-10,12;UBERON:0003057,3.73e-10,12;UBERON:0000025,8.73e-09,114;UBERON:0004111,9.43e-08,122;UBERON:0002420,9.43e-08,8;UBERON:0007245,9.43e-08,8;UBERON:0010009,9.43e-08,8;UBERON:0010011,9.43e-08,8;UBERON:0000454,9.43e-08,8 | |||
|phase1_expression=4.32401887182944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01755411891312,0.397163804803541,0.783599367416806,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,3.9119567217402,1.74420125104357,2.85592037554813,1.94429899074283,0.699932108126813,1.43752564364972,0.167782606057736,0,0.336093799142464,0.257259436035947,0.573066879877513,0,24.4802917640113,15.340738398889,25.9870875437533,0,0,0,0,0,5.09320187881288,9.60545763303886,11.509546966241,8.77538599155989,11.9885227970288,19.7099179238624,15.4607978666129,11.7591167246356,11.0222291670972,8.27296907949019,17.6185409599022,19.4084753889485,19.0472101237742,22.9482140650537,23.4208367622169,26.5665818983948,11.4465029590566,9.00420176050688,14.8214300343506,24.1595440088408,21.4981238006645,19.9447407033072,0.075726193333184,0.755715601067855,0,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0.34255163915718,0.258937883647172,1.33597925158342,0.173485326766136,0.304465478312141,0.691846491768175,0.60289056221049,0.470354828542819,0.376999773989026,0,0.578397427679647,0,0,0.220841518460394,0,0,19.9090941967852,19.6879904404648,0.255457055208591,0,0,0,16.4769703345305,18.3000241127451,12.4397808591736,35.1125126788398,29.1515621356577,13.5062228963714,14.7639549391659,0.305518091550949,0,0,1.05220927943237,0.260240885925407,0.459804208866946,2.88099407688559,1.65775299619287,2.17716797284249,2.562274405697,2.52994656311268,1.03481348295606,0,0.189106080167819,0.527853372491847,0.219195732427575,0,0,0,0.796137067273973,0,0,0,0,0.469052119962192,0.36012412292203,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.324275238183423,0.292399974850665,0.439100230582101,0,27.7582732104648,16.7734518178234,0,0,0.426576501070468,0.696710015581316,0.128867461322093,0.403367049246685,0.22237804384487,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0,1.79763881730844,0.216138049874694,0,0.189667900953082,0.342745537829186,1.1270773567308,0.407302655690628,0,0,0.189709611372772,0.442830443938806,0.156998727841375,0.370191491765402,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0,0,0,0.318909537314974,0.327726629431476,0,0.289298117163023,0,0,0,0,9.15138362930414,11.7211686592203,0.491804836130026,0,0,0.390438744296638,0,0.477937595905104,0.222798674082394,0.849229592366497,0,0.584511715822624,0.790575555893047,26.3483479465882,0.425820255624806,1.06839362200353,0.977321756121456,1.15479086080775,0,0.971122544619926,0.302323556964751,0.377210159511796,0.885905678642318,0,1.55056975900933,0,0.356497378384721,0.948110273807448,0,0,3.74483566329167,1.26042765821917,1.4229455216103,1.28602221018955,1.06404140185364,2.49716344642899,2.13913726782757,1.2178597964584,0,0,0,0.65954501176592,0.484393280087717,0.603129249281559,0.238744688006273,0.328281799490123,0.291480836629851,16.8737024829564,0,0.412773735926445,0,0,0,0,0,0,0,0,0.474503990371703,0,0.108005340821801,0,0,0.134864346384821,0.41326727862668,0,0,0,0,0.897099276263873,0.496375471371293,0.388902376688095,1.29159823477731,1.18269287843545,0.469428954583016,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0.453460767230423,0,0.179427713218951,0,0.386379188064381,0,0.183151624267265,0,0,20.3310663342144,24.8575627713876,25.2074025913335,40.5573510331103,24.6629707117431,25.6833925112498,20.925697507186,38.2773022740587,27.6416869480365,26.4057758993428,0.93408612825759,1.99512436700516,1.87806966329548,1.21553358534147,1.25767897576789,2.94149613520023,2.44471400581777,0.824140228955577,1.28367683836726,2.27427490587418,4.30914809813408,1.88626341386076,2.62196220915671,3.64943368707755,2.69946704091382,4.28664322154766,3.24476112645595,1.92909220463705,1.64834360321323,3.23837624295674,2.40008476669791,1.24233064311536,2.62279808942053,2.61623549938191,3.01150017329058,3.46919892355874,1.82927972872773,1.8414879800649,3.80251518768413,0.561142271657738,3.08451047122853,2.56111654176465,4.50154147486658,3.25367366490529,3.85813221962283,4.74640098082097,1.87145286756327,2.36358159453128,1.3390183244819,0.661774257358546,0 | |||
|short_description=p4@Nrxn2 | |||
}} |
Latest revision as of 03:09, 26 September 2015
Short description: | p4@Nrxn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Nrxn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -221bp_to_ENSMUST00000148391_5end |
EntrezGene: | Nrxn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.33e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.33e-19 | 23 |
neural cell | 1.36e-13 | 43 |
ectodermal cell | 4.93e-13 | 44 |
neurectodermal cell | 4.93e-13 | 44 |
neuron | 3.93e-12 | 33 |
neuronal stem cell | 3.93e-12 | 33 |
neuroblast | 3.93e-12 | 33 |
electrically signaling cell | 3.93e-12 | 33 |
electrically responsive cell | 5.96e-09 | 39 |
electrically active cell | 5.96e-09 | 39 |