FFCP PHASE1:Mm9::chr19:6497877..6497921,+: Difference between revisions
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{{FFCP|EntrezGene=18190|HGNC=|MCL_coexpression_id=42|UniProt=E9PUN1,Q3TQ54|association_with_transcript=42bp_to_ENSMUST00000113459,uc008giy.1_5end|description=CAGE_peak_8_at_Nrxn2_5end|id=chr19:6497877..6497921,+|ontology_enrichment_celltype=CL:0000117!3.42e-15!23;CL:0000337!3.42e-15!23;CL:0000540!1.92e-10!33;CL:0000047!1.92e-10!33;CL:0000031!1.92e-10!33;CL:0000404!1.92e-10!33;CL:0002319!5.25e-10!43;CL:0000221!1.57e-09!44;CL:0000133!1.57e-09!44;CL:0000393!1.99e-07!39;CL:0000211!1.99e-07!39;CL:0000055!3.83e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.00e-14,23;CL:0000337,4.00e-14,23;CL:0000540,5.95e-09,33;CL:0000047,5.95e-09,33;CL:0000031,5.95e-09,33;CL:0000404,5.95e-09,33;CL:0002319,7.46e-09,43;CL:0000221,1.42e-08,44;CL:0000133,1.42e-08,44;CL:0002612,1.17e-07,3;CL:0000120,1.37e-07,3;CL:0000393,3.85e-07,39;CL:0000211,3.85e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.32e-29!73;UBERON:0005743!2.32e-29!73;UBERON:0000073!1.05e-28!75;UBERON:0001016!1.05e-28!75;UBERON:0004121!4.37e-28!102;UBERON:0000924!4.37e-28!102;UBERON:0006601!4.37e-28!102;UBERON:0002346!7.51e-28!71;UBERON:0003075!7.51e-28!71;UBERON:0007284!7.51e-28!71;UBERON:0001049!1.57e-26!52;UBERON:0005068!1.57e-26!52;UBERON:0006241!1.57e-26!52;UBERON:0007135!1.57e-26!52;UBERON:0000033!2.28e-25!63;UBERON:0000955!1.09e-24!50;UBERON:0006238!1.09e-24!50;UBERON:0002616!5.73e-24!49;UBERON:0003056!8.84e-23!49;UBERON:0002020!1.72e-21!34;UBERON:0003080!3.88e-20!40;UBERON:0002780!1.85e-19!39;UBERON:0001890!1.85e-19!39;UBERON:0006240!1.85e-19!39;UBERON:0002791!2.60e-17!29;UBERON:0003528!2.60e-17!29;UBERON:0001893!2.60e-17!29;UBERON:0007811!2.78e-14!86;UBERON:0000153!2.58e-13!94;UBERON:0000956!2.51e-12!21;UBERON:0001869!2.51e-12!21;UBERON:0000203!2.51e-12!21;UBERON:0002619!5.04e-10!17;UBERON:0002021!4.01e-09!10;UBERON:0000411!4.01e-09!10;UBERON:0001950!4.01e-09!10;UBERON:0003076!6.58e-07!12;UBERON:0003057!6.58e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.32e-33,73;UBERON:0001016,1.67e-32,75;UBERON:0000073,3.34e-29,54;UBERON:0001049,7.90e-28,52;UBERON:0005068,7.90e-28,52;UBERON:0006241,7.90e-28,52;UBERON:0007135,7.90e-28,52;UBERON:0004121,1.04e-25,95;UBERON:0000924,1.04e-25,95;UBERON:0006601,1.04e-25,95;UBERON:0002020,8.43e-25,34;UBERON:0002346,3.29e-23,64;UBERON:0003075,3.29e-23,64;UBERON:0007284,3.29e-23,64;UBERON:0000955,8.17e-20,47;UBERON:0006238,8.17e-20,47;UBERON:0010371,1.66e-19,73;UBERON:0002616,1.61e-18,46;UBERON:0002021,1.56e-17,10;UBERON:0000411,1.56e-17,10;UBERON:0001950,1.56e-17,10;UBERON:0002619,6.07e-17,17;UBERON:0003528,2.44e-16,29;UBERON:0002791,2.44e-16,29;UBERON:0001893,2.44e-16,29;UBERON:0003080,1.25e-15,40;UBERON:0000956,1.75e-15,21;UBERON:0001869,1.75e-15,21;UBERON:0000203,1.75e-15,21;UBERON:0002780,2.00e-14,39;UBERON:0001890,2.00e-14,39;UBERON:0006240,2.00e-14,39;UBERON:0003076,3.40e-14,12;UBERON:0003057,3.40e-14,12;UBERON:0010314,4.50e-14,92;UBERON:0003056,1.90e-13,49;UBERON:0002240,2.75e-13,6;UBERON:0005174,2.75e-13,6;UBERON:0001137,2.75e-13,6;UBERON:0001948,1.12e-11,5;UBERON:0002315,1.12e-11,5;UBERON:0000025,4.08e-09,114;UBERON:0004111,4.23e-08,122;UBERON:0011216,1.04e-07,194;UBERON:0002257,1.17e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0.279972843250725,0,0,0,0,0,0,0,1.61853168687678,1.5869729378161,2.53532561402472,0,0,0,0,0,4.49400165777607,6.91592949578798,0.622137673850866,0.810035629990144,0.630974884054146,2.85650984403804,1.54607978666129,0.857435594504678,1.34183659425531,0,3.30347642998166,1.78762273319263,0.921639199537461,1.58263545276233,1.46380229763855,0.52091337055676,0.558365998002762,0.56276261003168,0.763991238884051,4.12480019663135,3.27454865837937,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,3.51336956413857,24.5052646971742,0,0,0,0,1.19832511523858,0.915001205637253,2.26177833803156,1.39059456153821,1.53429274398198,1.0389402227978,1.62241263067758,0.101839363850316,0,0,0.420883711772948,0.130120442962704,0.229902104433473,0.360124259610698,0,0.680364991513279,0.768682321709099,0.187403449119458,1.55222022443409,0,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0.329119699826961,0,0.0810688095458557,0,0,0,1.47202963994889,1.74937841044784,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,1.28440471990234,0.703270119553219,0,0,0,0,0.215423397732799,0,0,0,0,0.584511715822624,0,1.28528526568723,0.283880170416537,0.534196811001766,0.488660878060728,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.517434735131018,0.214337035031592,0.177340233642274,0,0.822745103010605,0.608929898229199,0,0,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.388902376688095,0,0.337912250981556,0.117357238645754,0.13020438484395,0,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,2.30162618253588,2.86447756719698,1.3748254587495,2.05524755931193,1.5107877947794,0.675022500231806,2.2516060161211,2.26571204492102,2.07104124700728,0.103787347584177,0.399024873401031,0,0.729320151204882,0.419226325255965,0.367687016900028,0,0.206035057238894,0,0,0,0.188626341386076,0.187283014939765,0,0.114870937911227,1.42888107384922,0,0.38581844092741,0,0.294397840268795,0,0,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0.309873682371932,0,1.49886346762768,0,1.07435527024149,0.382576664137687,0,0|short_description=p8@Nrxn2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18190 | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=E9PUN1,Q3TQ54 | |||
|association_with_transcript=42bp_to_ENSMUST00000113459,uc008giy.1_5end | |||
|cluster_id=chr19:6497877..6497921,+ | |||
|description=CAGE_peak_8_at_Nrxn2_5end | |||
|id=chr19:6497877..6497921,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.42e-15!23;CL:0000337!3.42e-15!23;CL:0000540!1.92e-10!33;CL:0000047!1.92e-10!33;CL:0000031!1.92e-10!33;CL:0000404!1.92e-10!33;CL:0002319!5.25e-10!43;CL:0000221!1.57e-09!44;CL:0000133!1.57e-09!44;CL:0000393!1.99e-07!39;CL:0000211!1.99e-07!39;CL:0000055!3.83e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.00e-14,23;CL:0000337,4.00e-14,23;CL:0000540,5.95e-09,33;CL:0000047,5.95e-09,33;CL:0000031,5.95e-09,33;CL:0000404,5.95e-09,33;CL:0002319,7.46e-09,43;CL:0000221,1.42e-08,44;CL:0000133,1.42e-08,44;CL:0002612,1.17e-07,3;CL:0000120,1.37e-07,3;CL:0000393,3.85e-07,39;CL:0000211,3.85e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.32e-29!73;UBERON:0005743!2.32e-29!73;UBERON:0000073!1.05e-28!75;UBERON:0001016!1.05e-28!75;UBERON:0004121!4.37e-28!102;UBERON:0000924!4.37e-28!102;UBERON:0006601!4.37e-28!102;UBERON:0002346!7.51e-28!71;UBERON:0003075!7.51e-28!71;UBERON:0007284!7.51e-28!71;UBERON:0001049!1.57e-26!52;UBERON:0005068!1.57e-26!52;UBERON:0006241!1.57e-26!52;UBERON:0007135!1.57e-26!52;UBERON:0000033!2.28e-25!63;UBERON:0000955!1.09e-24!50;UBERON:0006238!1.09e-24!50;UBERON:0002616!5.73e-24!49;UBERON:0003056!8.84e-23!49;UBERON:0002020!1.72e-21!34;UBERON:0003080!3.88e-20!40;UBERON:0002780!1.85e-19!39;UBERON:0001890!1.85e-19!39;UBERON:0006240!1.85e-19!39;UBERON:0002791!2.60e-17!29;UBERON:0003528!2.60e-17!29;UBERON:0001893!2.60e-17!29;UBERON:0007811!2.78e-14!86;UBERON:0000153!2.58e-13!94;UBERON:0000956!2.51e-12!21;UBERON:0001869!2.51e-12!21;UBERON:0000203!2.51e-12!21;UBERON:0002619!5.04e-10!17;UBERON:0002021!4.01e-09!10;UBERON:0000411!4.01e-09!10;UBERON:0001950!4.01e-09!10;UBERON:0003076!6.58e-07!12;UBERON:0003057!6.58e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.32e-33,73;UBERON:0001016,1.67e-32,75;UBERON:0000073,3.34e-29,54;UBERON:0001049,7.90e-28,52;UBERON:0005068,7.90e-28,52;UBERON:0006241,7.90e-28,52;UBERON:0007135,7.90e-28,52;UBERON:0004121,1.04e-25,95;UBERON:0000924,1.04e-25,95;UBERON:0006601,1.04e-25,95;UBERON:0002020,8.43e-25,34;UBERON:0002346,3.29e-23,64;UBERON:0003075,3.29e-23,64;UBERON:0007284,3.29e-23,64;UBERON:0000955,8.17e-20,47;UBERON:0006238,8.17e-20,47;UBERON:0010371,1.66e-19,73;UBERON:0002616,1.61e-18,46;UBERON:0002021,1.56e-17,10;UBERON:0000411,1.56e-17,10;UBERON:0001950,1.56e-17,10;UBERON:0002619,6.07e-17,17;UBERON:0003528,2.44e-16,29;UBERON:0002791,2.44e-16,29;UBERON:0001893,2.44e-16,29;UBERON:0003080,1.25e-15,40;UBERON:0000956,1.75e-15,21;UBERON:0001869,1.75e-15,21;UBERON:0000203,1.75e-15,21;UBERON:0002780,2.00e-14,39;UBERON:0001890,2.00e-14,39;UBERON:0006240,2.00e-14,39;UBERON:0003076,3.40e-14,12;UBERON:0003057,3.40e-14,12;UBERON:0010314,4.50e-14,92;UBERON:0003056,1.90e-13,49;UBERON:0002240,2.75e-13,6;UBERON:0005174,2.75e-13,6;UBERON:0001137,2.75e-13,6;UBERON:0001948,1.12e-11,5;UBERON:0002315,1.12e-11,5;UBERON:0000025,4.08e-09,114;UBERON:0004111,4.23e-08,122;UBERON:0011216,1.04e-07,194;UBERON:0002257,1.17e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0.279972843250725,0,0,0,0,0,0,0,1.61853168687678,1.5869729378161,2.53532561402472,0,0,0,0,0,4.49400165777607,6.91592949578798,0.622137673850866,0.810035629990144,0.630974884054146,2.85650984403804,1.54607978666129,0.857435594504678,1.34183659425531,0,3.30347642998166,1.78762273319263,0.921639199537461,1.58263545276233,1.46380229763855,0.52091337055676,0.558365998002762,0.56276261003168,0.763991238884051,4.12480019663135,3.27454865837937,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,3.51336956413857,24.5052646971742,0,0,0,0,1.19832511523858,0.915001205637253,2.26177833803156,1.39059456153821,1.53429274398198,1.0389402227978,1.62241263067758,0.101839363850316,0,0,0.420883711772948,0.130120442962704,0.229902104433473,0.360124259610698,0,0.680364991513279,0.768682321709099,0.187403449119458,1.55222022443409,0,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0.329119699826961,0,0.0810688095458557,0,0,0,1.47202963994889,1.74937841044784,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,1.28440471990234,0.703270119553219,0,0,0,0,0.215423397732799,0,0,0,0,0.584511715822624,0,1.28528526568723,0.283880170416537,0.534196811001766,0.488660878060728,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.517434735131018,0.214337035031592,0.177340233642274,0,0.822745103010605,0.608929898229199,0,0,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.388902376688095,0,0.337912250981556,0.117357238645754,0.13020438484395,0,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,2.30162618253588,2.86447756719698,1.3748254587495,2.05524755931193,1.5107877947794,0.675022500231806,2.2516060161211,2.26571204492102,2.07104124700728,0.103787347584177,0.399024873401031,0,0.729320151204882,0.419226325255965,0.367687016900028,0,0.206035057238894,0,0,0,0.188626341386076,0.187283014939765,0,0.114870937911227,1.42888107384922,0,0.38581844092741,0,0.294397840268795,0,0,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0.309873682371932,0,1.49886346762768,0,1.07435527024149,0.382576664137687,0,0 | |||
|short_description=p8@Nrxn2 | |||
}} |
Latest revision as of 03:11, 26 September 2015
Short description: | p8@Nrxn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Nrxn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | 42bp_to_ENSMUST00000113459, uc008giy.1_5end |
EntrezGene: | Nrxn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.00e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.00e-14 | 23 |
neuron | 5.95e-09 | 33 |
neuronal stem cell | 5.95e-09 | 33 |
neuroblast | 5.95e-09 | 33 |
electrically signaling cell | 5.95e-09 | 33 |
neural cell | 7.46e-09 | 43 |
ectodermal cell | 1.42e-08 | 44 |
neurectodermal cell | 1.42e-08 | 44 |
neuron of the ventral spinal cord | 1.17e-07 | 3 |
granule cell | 1.37e-07 | 3 |
electrically responsive cell | 3.85e-07 | 39 |
electrically active cell | 3.85e-07 | 39 |