FFCP PHASE1:Mm9::chr14:55735398..55735422,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319984 | |EntrezGene=319984 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000133954_5end | |association_with_transcript=0bp_to_ENSMUST00000133954_5end | ||
|cluster_id=chr14:55735398..55735422,- | |||
|description=CAGE_peak_3_at_Jph4_5end | |description=CAGE_peak_3_at_Jph4_5end | ||
|id=chr14:55735398..55735422,- | |id=chr14:55735398..55735422,- | ||
|ontology_enrichment_celltype=CL:0000117!3.36e-14!23;CL:0000337!3.36e-14!23;CL:0000540!1.92e-13!33;CL:0000047!1.92e-13!33;CL:0000031!1.92e-13!33;CL:0000404!1.92e-13!33;CL:0000393!4.72e-09!39;CL:0000211!4.72e-09!39;CL:0000221!2.55e-08!44;CL:0000133!2.55e-08!44;CL:0002319!2.65e-08!43 | |ontology_enrichment_celltype=CL:0000117!3.36e-14!23;CL:0000337!3.36e-14!23;CL:0000540!1.92e-13!33;CL:0000047!1.92e-13!33;CL:0000031!1.92e-13!33;CL:0000404!1.92e-13!33;CL:0000393!4.72e-09!39;CL:0000211!4.72e-09!39;CL:0000221!2.55e-08!44;CL:0000133!2.55e-08!44;CL:0002319!2.65e-08!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.07e-18,23;CL:0000337,1.07e-18,23;CL:0000540,5.85e-15,33;CL:0000047,5.85e-15,33;CL:0000031,5.85e-15,33;CL:0000404,5.85e-15,33;CL:0000393,3.81e-11,39;CL:0000211,3.81e-11,39;CL:0002319,3.01e-09,43;CL:0000221,7.79e-09,44;CL:0000133,7.79e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.22e-24!71;UBERON:0003075!6.22e-24!71;UBERON:0007284!6.22e-24!71;UBERON:0001017!8.07e-23!73;UBERON:0005743!8.07e-23!73;UBERON:0000073!1.40e-22!75;UBERON:0001016!1.40e-22!75;UBERON:0004121!9.44e-22!102;UBERON:0000924!9.44e-22!102;UBERON:0006601!9.44e-22!102;UBERON:0001049!6.26e-21!52;UBERON:0005068!6.26e-21!52;UBERON:0006241!6.26e-21!52;UBERON:0007135!6.26e-21!52;UBERON:0000033!1.56e-20!63;UBERON:0002020!1.70e-19!34;UBERON:0000955!2.49e-19!50;UBERON:0006238!2.49e-19!50;UBERON:0002616!9.68e-19!49;UBERON:0003056!3.05e-18!49;UBERON:0003080!1.25e-16!40;UBERON:0002791!2.13e-16!29;UBERON:0003528!2.13e-16!29;UBERON:0001893!2.13e-16!29;UBERON:0002780!4.16e-16!39;UBERON:0001890!4.16e-16!39;UBERON:0006240!4.16e-16!39;UBERON:0000956!1.73e-11!21;UBERON:0001869!1.73e-11!21;UBERON:0000203!1.73e-11!21;UBERON:0002619!4.34e-09!17;UBERON:0007811!1.49e-08!86;UBERON:0000153!2.39e-08!94;UBERON:0002021!2.55e-08!10;UBERON:0000411!2.55e-08!10;UBERON:0001950!2.55e-08!10 | |ontology_enrichment_uberon=UBERON:0002346!6.22e-24!71;UBERON:0003075!6.22e-24!71;UBERON:0007284!6.22e-24!71;UBERON:0001017!8.07e-23!73;UBERON:0005743!8.07e-23!73;UBERON:0000073!1.40e-22!75;UBERON:0001016!1.40e-22!75;UBERON:0004121!9.44e-22!102;UBERON:0000924!9.44e-22!102;UBERON:0006601!9.44e-22!102;UBERON:0001049!6.26e-21!52;UBERON:0005068!6.26e-21!52;UBERON:0006241!6.26e-21!52;UBERON:0007135!6.26e-21!52;UBERON:0000033!1.56e-20!63;UBERON:0002020!1.70e-19!34;UBERON:0000955!2.49e-19!50;UBERON:0006238!2.49e-19!50;UBERON:0002616!9.68e-19!49;UBERON:0003056!3.05e-18!49;UBERON:0003080!1.25e-16!40;UBERON:0002791!2.13e-16!29;UBERON:0003528!2.13e-16!29;UBERON:0001893!2.13e-16!29;UBERON:0002780!4.16e-16!39;UBERON:0001890!4.16e-16!39;UBERON:0006240!4.16e-16!39;UBERON:0000956!1.73e-11!21;UBERON:0001869!1.73e-11!21;UBERON:0000203!1.73e-11!21;UBERON:0002619!4.34e-09!17;UBERON:0007811!1.49e-08!86;UBERON:0000153!2.39e-08!94;UBERON:0002021!2.55e-08!10;UBERON:0000411!2.55e-08!10;UBERON:0001950!2.55e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.05e-28,54;UBERON:0002346,2.35e-28,64;UBERON:0003075,2.35e-28,64;UBERON:0007284,2.35e-28,64;UBERON:0001017,1.04e-27,73;UBERON:0001049,2.15e-27,52;UBERON:0005068,2.15e-27,52;UBERON:0006241,2.15e-27,52;UBERON:0007135,2.15e-27,52;UBERON:0002020,9.94e-27,34;UBERON:0001016,2.08e-26,75;UBERON:0010371,2.66e-23,73;UBERON:0000955,3.18e-23,47;UBERON:0006238,3.18e-23,47;UBERON:0003528,1.68e-22,29;UBERON:0002791,1.68e-22,29;UBERON:0001893,1.68e-22,29;UBERON:0002616,1.93e-22,46;UBERON:0004121,1.72e-21,95;UBERON:0000924,1.72e-21,95;UBERON:0006601,1.72e-21,95;UBERON:0003080,7.25e-21,40;UBERON:0003056,1.01e-20,49;UBERON:0002780,3.66e-20,39;UBERON:0001890,3.66e-20,39;UBERON:0006240,3.66e-20,39;UBERON:0010314,3.51e-18,92;UBERON:0000956,8.43e-16,21;UBERON:0001869,8.43e-16,21;UBERON:0000203,8.43e-16,21;UBERON:0002619,1.59e-12,17;UBERON:0002021,9.97e-11,10;UBERON:0000411,9.97e-11,10;UBERON:0001950,9.97e-11,10;UBERON:0002420,7.58e-08,8;UBERON:0007245,7.58e-08,8;UBERON:0010009,7.58e-08,8;UBERON:0010011,7.58e-08,8;UBERON:0000454,7.58e-08,8;UBERON:0003076,5.21e-07,12;UBERON:0003057,5.21e-07,12 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4339625468194,30.6814767977779,24.719424736741,0.338844532069132,0,0,0,0,0,0.384218305321555,19.7010263386108,26.4611639130114,15.3537221786509,15.7108041422092,20.0990372265968,17.3936934885235,22.6195311603038,26.6573448116906,2.20231761998777,27.5804650264005,17.8183578577242,21.761237475482,31.4717493992289,26.045668527838,12.5632349550621,12.9435400307286,14.9742282821274,26.2219441071564,32.7454865837937,18.0807462450542,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0.91347103775248,0,0.445326417194474,1.73485326766136,4.56698217468212,1.15307748628029,1.05505848386836,2.82212897125692,0,0,0.289198713839823,0,0.323533699894818,0.441683036920787,0,0,33.9625724533395,34.3492599174066,0,0,0,0,13.6309481858389,39.8025524452205,45.7381841690826,45.7157962105687,35.5444485689159,20.5710164113964,29.2034273521964,0.407357455401265,0,0,0.420883711772948,0.520481771850815,0.919608417733892,1.98068342785884,3.16480117455002,2.85753296435577,4.09963904911519,4.2165776051878,2.06962696591213,0,0.189106080167819,1.23165786914764,1.31517439456545,0.278047249225598,0.348252166522167,0.823128545631774,0.398068533636986,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,56.7782861123144,35.1933774337153,0,0,0.853153002140936,0.928946687441754,2.44848176511977,1.00841762311671,1.55664630691409,0.570676878337677,0,0.494096864172033,0.251335208800269,0.596869416123452,0.38992817423824,0,0.216138049874694,0,0.569003702859245,0.685491075658373,0,0.203651327845314,0.387904974335251,0,0.0632365371242573,0,0,0,0,0.333690211432188,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.488894929326078,0,0.234690248288502,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,10.1146871692309,11.2523219128515,0,0.252470927204373,1.89304931649754,1.95219372148319,1.50796378412959,0.238968797952552,0.891194696329576,0.849229592366497,0,1.75353514746787,0.395287777946524,18.315315036043,1.13552068166615,1.78065603667255,0.651547837414304,4.12425307431339,0,0.485561272309963,0,0.565815239267694,0,0.614870295887855,0.516856586336442,0,0.356497378384721,0,0,0,0,0.720244376125241,0.646793418913773,0,0.354680467284547,2.85390108163313,2.46823530903181,2.74018454203139,0,0.21183207086382,1.10264199027481,0.16488625294148,0.161464426695906,0.120625849856312,0,0.164140899745061,0.291480836629851,14.8340241608408,0,0.206386867963223,0,0,0,0,0,0,0,0,0.949007980743406,1.01659733563424,1.08005340821801,0.627264888043406,0.87345025498471,0.809186078308924,0.41326727862668,0.523511883968059,0,0.621339313086926,0.56369293868419,0.598066184175915,0.165458490457098,0,0.129159823477731,0.168956125490778,0.352071715937262,0.39061315453185,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0,0,0,0,0,0,0.19318959403219,0.187682475451182,1.09890974560359,0.643105137237198,0.501572104035363,50.827665835536,61.2232564554545,59.0082378842579,73.2094556784109,21.2375581128899,27.9495742034189,37.8012600129811,29.7211994127986,23.5634052671786,27.9590568345983,0.415149390336707,1.59609949360412,4.43907374960749,6.07766792670735,6.28839487883947,8.45680138870065,5.778414922842,7.0051919461224,4.81378814387723,6.57012750585873,6.08350319736575,7.35642731405697,6.27398100048212,6.21043978327232,6.43277252302869,4.28664322154766,5.44656331940821,4.05109362973781,5.76920261124629,5.5935589651071,6.17164654293748,5.50174999093946,5.00715998889374,5.66851024866081,4.79957840118186,4.14611578669215,3.65855945745545,5.26139422875686,4.6173398707593,7.2948495315506,4.62676570684279,4.82671963640261,5.72923460437565,7.59190521811233,5.01557188550968,14.7388240983388,3.74290573512653,4.94203424311086,2.48674831689496,0.220591419119515,0.231867835620421 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|phase1_expression=1.12104192973356,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4339625468194,30.6814767977779,24.719424736741,0.338844532069132,0,0,0,0,0,0.384218305321555,19.7010263386108,26.4611639130114,15.3537221786509,15.7108041422092,20.0990372265968,17.3936934885235,22.6195311603038,26.6573448116906,2.20231761998777,27.5804650264005,17.8183578577242,21.761237475482,31.4717493992289,26.045668527838,12.5632349550621,12.9435400307286,14.9742282821274,26.2219441071564,32.7454865837937,18.0807462450542,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0.91347103775248,0,0.445326417194474,1.73485326766136,4.56698217468212,1.15307748628029,1.05505848386836,2.82212897125692,0,0,0.289198713839823,0,0.323533699894818,0.441683036920787,0,0,33.9625724533395,34.3492599174066,0,0,0,0,13.6309481858389,39.8025524452205,45.7381841690826,45.7157962105687,35.5444485689159,20.5710164113964,29.2034273521964,0.407357455401265,0,0,0.420883711772948,0.520481771850815,0.919608417733892,1.98068342785884,3.16480117455002,2.85753296435577,4.09963904911519,4.2165776051878,2.06962696591213,0,0.189106080167819,1.23165786914764,1.31517439456545,0.278047249225598,0.348252166522167,0.823128545631774,0.398068533636986,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,56.7782861123144,35.1933774337153,0,0,0.853153002140936,0.928946687441754,2.44848176511977,1.00841762311671,1.55664630691409,0.570676878337677,0,0.494096864172033,0.251335208800269,0.596869416123452,0.38992817423824,0,0.216138049874694,0,0.569003702859245,0.685491075658373,0,0.203651327845314,0.387904974335251,0,0.0632365371242573,0,0,0,0,0.333690211432188,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.488894929326078,0,0.234690248288502,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,10.1146871692309,11.2523219128515,0,0.252470927204373,1.89304931649754,1.95219372148319,1.50796378412959,0.238968797952552,0.891194696329576,0.849229592366497,0,1.75353514746787,0.395287777946524,18.315315036043,1.13552068166615,1.78065603667255,0.651547837414304,4.12425307431339,0,0.485561272309963,0,0.565815239267694,0,0.614870295887855,0.516856586336442,0,0.356497378384721,0,0,0,0,0.720244376125241,0.646793418913773,0,0.354680467284547,2.85390108163313,2.46823530903181,2.74018454203139,0,0.21183207086382,1.10264199027481,0.16488625294148,0.161464426695906,0.120625849856312,0,0.164140899745061,0.291480836629851,14.8340241608408,0,0.206386867963223,0,0,0,0,0,0,0,0,0.949007980743406,1.01659733563424,1.08005340821801,0.627264888043406,0.87345025498471,0.809186078308924,0.41326727862668,0.523511883968059,0,0.621339313086926,0.56369293868419,0.598066184175915,0.165458490457098,0,0.129159823477731,0.168956125490778,0.352071715937262,0.39061315453185,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0,0,0,0,0,0,0.19318959403219,0.187682475451182,1.09890974560359,0.643105137237198,0.501572104035363,50.827665835536,61.2232564554545,59.0082378842579,73.2094556784109,21.2375581128899,27.9495742034189,37.8012600129811,29.7211994127986,23.5634052671786,27.9590568345983,0.415149390336707,1.59609949360412,4.43907374960749,6.07766792670735,6.28839487883947,8.45680138870065,5.778414922842,7.0051919461224,4.81378814387723,6.57012750585873,6.08350319736575,7.35642731405697,6.27398100048212,6.21043978327232,6.43277252302869,4.28664322154766,5.44656331940821,4.05109362973781,5.76920261124629,5.5935589651071,6.17164654293748,5.50174999093946,5.00715998889374,5.66851024866081,4.79957840118186,4.14611578669215,3.65855945745545,5.26139422875686,4.6173398707593,7.2948495315506,4.62676570684279,4.82671963640261,5.72923460437565,7.59190521811233,5.01557188550968,14.7388240983388,3.74290573512653,4.94203424311086,2.48674831689496,0.220591419119515,0.231867835620421 | ||
|short_description=p3@Jph4 | |short_description=p3@Jph4 | ||
}} | }} |
Latest revision as of 03:27, 26 September 2015
Short description: | p3@Jph4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Jph4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000133954_5end |
EntrezGene: | Jph4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.07e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.07e-18 | 23 |
neuron | 5.85e-15 | 33 |
neuronal stem cell | 5.85e-15 | 33 |
neuroblast | 5.85e-15 | 33 |
electrically signaling cell | 5.85e-15 | 33 |
electrically responsive cell | 3.81e-11 | 39 |
electrically active cell | 3.81e-11 | 39 |
neural cell | 3.01e-09 | 43 |
ectodermal cell | 7.79e-09 | 44 |
neurectodermal cell | 7.79e-09 | 44 |