FFCP PHASE1:Mm9::chr14:55735781..55735817,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr14:55735781..55735817,- to FFCP PHASE1:Mm9::chr14:55735781..55735817,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=319984 | |EntrezGene=319984 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=Q80WT0 | |UniProt=Q80WT0 | ||
|association_with_transcript=-9bp_to_ENSMUST00000022819,NM_177049_5end | |||
|cluster_id=chr14:55735781..55735817,- | |||
|description=CAGE_peak_9_at_Jph4_5end | |||
|id=chr14:55735781..55735817,- | |||
|ontology_enrichment_celltype=CL:0000117!2.84e-14!23;CL:0000337!2.84e-14!23;CL:0000540!9.95e-12!33;CL:0000047!9.95e-12!33;CL:0000031!9.95e-12!33;CL:0000404!9.95e-12!33;CL:0000393!3.14e-08!39;CL:0000211!3.14e-08!39;CL:0000221!1.25e-07!44;CL:0000133!1.25e-07!44;CL:0002319!1.74e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.66e-19,23;CL:0000337,5.66e-19,23;CL:0000540,1.41e-14,33;CL:0000047,1.41e-14,33;CL:0000031,1.41e-14,33;CL:0000404,1.41e-14,33;CL:0000393,1.97e-11,39;CL:0000211,1.97e-11,39;CL:0002319,7.71e-10,43;CL:0000221,1.73e-09,44;CL:0000133,1.73e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.07e-20!71;UBERON:0003075!4.07e-20!71;UBERON:0007284!4.07e-20!71;UBERON:0000073!1.71e-18!75;UBERON:0001016!1.71e-18!75;UBERON:0001017!2.60e-18!73;UBERON:0005743!2.60e-18!73;UBERON:0004121!1.68e-17!102;UBERON:0000924!1.68e-17!102;UBERON:0006601!1.68e-17!102;UBERON:0000033!3.24e-17!63;UBERON:0001049!3.61e-17!52;UBERON:0005068!3.61e-17!52;UBERON:0006241!3.61e-17!52;UBERON:0007135!3.61e-17!52;UBERON:0000955!3.69e-15!50;UBERON:0006238!3.69e-15!50;UBERON:0002616!1.72e-14!49;UBERON:0003056!1.07e-13!49;UBERON:0002020!3.45e-12!34;UBERON:0003080!9.20e-12!40;UBERON:0002780!4.02e-11!39;UBERON:0001890!4.02e-11!39;UBERON:0006240!4.02e-11!39;UBERON:0002791!9.77e-09!29;UBERON:0003528!9.77e-09!29;UBERON:0001893!9.77e-09!29;UBERON:0007811!9.96e-09!86;UBERON:0000153!8.45e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.80e-21,73;UBERON:0001016,2.03e-20,75;UBERON:0000073,2.60e-19,54;UBERON:0002346,8.19e-18,64;UBERON:0003075,8.19e-18,64;UBERON:0007284,8.19e-18,64;UBERON:0001049,1.02e-17,52;UBERON:0005068,1.02e-17,52;UBERON:0006241,1.02e-17,52;UBERON:0007135,1.02e-17,52;UBERON:0004121,5.11e-17,95;UBERON:0000924,5.11e-17,95;UBERON:0006601,5.11e-17,95;UBERON:0010371,1.90e-14,73;UBERON:0002020,5.45e-14,34;UBERON:0000955,2.91e-12,47;UBERON:0006238,2.91e-12,47;UBERON:0003076,8.09e-12,12;UBERON:0003057,8.09e-12,12;UBERON:0002616,2.44e-11,46;UBERON:0010314,1.86e-10,92;UBERON:0002240,2.48e-10,6;UBERON:0005174,2.48e-10,6;UBERON:0001137,2.48e-10,6;UBERON:0003056,3.90e-09,49;UBERON:0003080,6.82e-09,40;UBERON:0001948,8.48e-09,5;UBERON:0002315,8.48e-09,5;UBERON:0003528,1.29e-08,29;UBERON:0002791,1.29e-08,29;UBERON:0001893,1.29e-08,29;UBERON:0002780,4.71e-08,39;UBERON:0001890,4.71e-08,39;UBERON:0006240,4.71e-08,39;UBERON:0002420,3.51e-07,8;UBERON:0007245,3.51e-07,8;UBERON:0010009,3.51e-07,8;UBERON:0010011,3.51e-07,8;UBERON:0000454,3.51e-07,8 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63011399117477,3.1739458756322,3.1691570175309,0,0,0,0,0,0,0,1.03689612308478,1.35005938331691,0.420649922702764,2.28520787523043,1.76694832761291,0.979926393719632,0.862609239164127,0,1.10115880999389,1.65993539510744,1.38245879930619,4.48413378282659,5.21479568533735,5.73004707612436,1.95428099300967,0.56276261003168,2.13917546887534,2.35702868378934,3.98640706237488,5.40558392893372,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,1.52232739156071,0,0.753613202763113,0.587943535678524,0,0,0,0,0,0,0,0,1.46390398505774,1.04723353406728,0,0,0,0,1.9472783122627,0.915001205637253,1.25654352112864,1.73824320192276,1.27857728665165,1.0389402227978,1.29793010454206,0.101839363850316,0,0,0.210441855886474,0,0.229902104433473,1.44049703844279,0.150704817835715,1.2246569847239,0.768682321709099,0.749613796477831,1.55222022443409,0,0,0.175951124163949,0,0.556094498451196,0.348252166522167,0,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,2.46971069710283,0,0,1.91959425481711,1.39342003116263,0.902072229254653,0.80673409849337,0,1.14135375667535,0,0.329397909448022,0,0,0.38992817423824,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,2.56880943980467,1.40654023910644,0,0.252470927204373,0,1.95219372148319,0.646270193198397,0,0.222798674082394,0,0,1.16902343164525,0,1.92792789853084,0,0.712262414669021,0.488660878060728,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0.900305470156551,0.388076051348264,0.643011105094777,0.354680467284547,0.356737635204141,0.987294123612726,1.2178597964584,0,0,0,0,0,0,0,0,0,3.33765543618917,0,0.206386867963223,0,0,0,0,0,0,0,0,1.26534397432454,1.01659733563424,0.86404272657441,0.209088296014469,0.436725127492355,0.404593039154462,0.41326727862668,0.26175594198403,0,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.524296722128554,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,2.30162618253588,0.572895513439397,1.89038500578056,2.05524755931193,1.5107877947794,0,0.45032120322422,0,0.51776031175182,0.31136204275253,0.798049746802062,1.53660245178721,1.21553358534147,0.838452650511929,1.65459157605013,0.222246727801615,1.03017528619447,1.60459604795908,1.26348605881899,1.52087579934144,1.32038438970253,1.31098110457835,0.576226371643824,0.631790158511746,2.85776214769844,0.579421629724277,0.192909220463705,1.23625770240992,0.441596760403192,1.02860775715625,0.887379030796687,0.953744759789284,0.581385666529314,0.564656282491984,0.507687647350059,0.73171189149109,0.263069711437843,0.679020569229309,1.12228454331548,0.949080144993393,1.18205378850676,0.818462086339379,1.08455788830176,0.385813221962283,1.24905288968973,0.467863216890817,1.28922632428979,0.382576664137687,0.441182838239031,0 | |phase1_expression=0.640595388419176,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63011399117477,3.1739458756322,3.1691570175309,0,0,0,0,0,0,0,1.03689612308478,1.35005938331691,0.420649922702764,2.28520787523043,1.76694832761291,0.979926393719632,0.862609239164127,0,1.10115880999389,1.65993539510744,1.38245879930619,4.48413378282659,5.21479568533735,5.73004707612436,1.95428099300967,0.56276261003168,2.13917546887534,2.35702868378934,3.98640706237488,5.40558392893372,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,1.52232739156071,0,0.753613202763113,0.587943535678524,0,0,0,0,0,0,0,0,1.46390398505774,1.04723353406728,0,0,0,0,1.9472783122627,0.915001205637253,1.25654352112864,1.73824320192276,1.27857728665165,1.0389402227978,1.29793010454206,0.101839363850316,0,0,0.210441855886474,0,0.229902104433473,1.44049703844279,0.150704817835715,1.2246569847239,0.768682321709099,0.749613796477831,1.55222022443409,0,0,0.175951124163949,0,0.556094498451196,0.348252166522167,0,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,2.46971069710283,0,0,1.91959425481711,1.39342003116263,0.902072229254653,0.80673409849337,0,1.14135375667535,0,0.329397909448022,0,0,0.38992817423824,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,2.56880943980467,1.40654023910644,0,0.252470927204373,0,1.95219372148319,0.646270193198397,0,0.222798674082394,0,0,1.16902343164525,0,1.92792789853084,0,0.712262414669021,0.488660878060728,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0.900305470156551,0.388076051348264,0.643011105094777,0.354680467284547,0.356737635204141,0.987294123612726,1.2178597964584,0,0,0,0,0,0,0,0,0,3.33765543618917,0,0.206386867963223,0,0,0,0,0,0,0,0,1.26534397432454,1.01659733563424,0.86404272657441,0.209088296014469,0.436725127492355,0.404593039154462,0.41326727862668,0.26175594198403,0,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.524296722128554,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,2.30162618253588,0.572895513439397,1.89038500578056,2.05524755931193,1.5107877947794,0,0.45032120322422,0,0.51776031175182,0.31136204275253,0.798049746802062,1.53660245178721,1.21553358534147,0.838452650511929,1.65459157605013,0.222246727801615,1.03017528619447,1.60459604795908,1.26348605881899,1.52087579934144,1.32038438970253,1.31098110457835,0.576226371643824,0.631790158511746,2.85776214769844,0.579421629724277,0.192909220463705,1.23625770240992,0.441596760403192,1.02860775715625,0.887379030796687,0.953744759789284,0.581385666529314,0.564656282491984,0.507687647350059,0.73171189149109,0.263069711437843,0.679020569229309,1.12228454331548,0.949080144993393,1.18205378850676,0.818462086339379,1.08455788830176,0.385813221962283,1.24905288968973,0.467863216890817,1.28922632428979,0.382576664137687,0.441182838239031,0 | ||
|short_description=p9@Jph4 | |||
}} | }} |
Latest revision as of 03:28, 26 September 2015
Short description: | p9@Jph4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Jph4_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | -9bp_to_ENSMUST00000022819, NM_177049_5end |
EntrezGene: | Jph4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.66e-19 | 23 |
neuroblast (sensu Vertebrata) | 5.66e-19 | 23 |
neuron | 1.41e-14 | 33 |
neuronal stem cell | 1.41e-14 | 33 |
neuroblast | 1.41e-14 | 33 |
electrically signaling cell | 1.41e-14 | 33 |
electrically responsive cell | 1.97e-11 | 39 |
electrically active cell | 1.97e-11 | 39 |
neural cell | 7.71e-10 | 43 |
ectodermal cell | 1.73e-09 | 44 |
neurectodermal cell | 1.73e-09 | 44 |