FFCP PHASE1:Mm9::chr19:7062081..7062108,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr19:7062081..7062108,- to FFCP PHASE1:Mm9::chr19:7062081..7062108,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22340 | |EntrezGene=22340 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1163 | |||
|TSSclassifier=NA | |||
|UniProt=P49766 | |UniProt=P49766 | ||
|association_with_transcript=10bp_to_ENSMUST00000130048_5end | |||
|cluster_id=chr19:7062081..7062108,- | |||
|description=CAGE_peak_3_at_Vegfb_5end | |||
|id=chr19:7062081..7062108,- | |||
|ontology_enrichment_celltype=CL:0000117!2.63e-08!23;CL:0000337!2.63e-08!23;CL:0002319!9.24e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.95e-09,23;CL:0000337,1.95e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.17e-16!73;UBERON:0005743!7.17e-16!73;UBERON:0000073!2.27e-15!75;UBERON:0001016!2.27e-15!75;UBERON:0004121!4.81e-15!102;UBERON:0000924!4.81e-15!102;UBERON:0006601!4.81e-15!102;UBERON:0000033!1.54e-14!63;UBERON:0001049!2.46e-14!52;UBERON:0005068!2.46e-14!52;UBERON:0006241!2.46e-14!52;UBERON:0007135!2.46e-14!52;UBERON:0000955!2.33e-13!50;UBERON:0006238!2.33e-13!50;UBERON:0002616!5.51e-13!49;UBERON:0002346!9.51e-13!71;UBERON:0003075!9.51e-13!71;UBERON:0007284!9.51e-13!71;UBERON:0002020!7.64e-12!34;UBERON:0002791!2.49e-09!29;UBERON:0003528!2.49e-09!29;UBERON:0001893!2.49e-09!29;UBERON:0003056!3.33e-09!49;UBERON:0004111!5.59e-09!122;UBERON:0000025!1.40e-08!114;UBERON:0003080!1.50e-08!40;UBERON:0002780!4.98e-08!39;UBERON:0001890!4.98e-08!39;UBERON:0006240!4.98e-08!39;UBERON:0003103!1.66e-07!43;UBERON:0003076!1.77e-07!12;UBERON:0003057!1.77e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.04e-20,92;UBERON:0000073,1.87e-20,54;UBERON:0001017,1.26e-18,73;UBERON:0001049,1.57e-18,52;UBERON:0005068,1.57e-18,52;UBERON:0006241,1.57e-18,52;UBERON:0007135,1.57e-18,52;UBERON:0001016,9.84e-18,75;UBERON:0004121,1.02e-14,95;UBERON:0000924,1.02e-14,95;UBERON:0006601,1.02e-14,95;UBERON:0004111,2.53e-14,122;UBERON:0002020,2.54e-14,34;UBERON:0000955,3.05e-14,47;UBERON:0006238,3.05e-14,47;UBERON:0000025,3.84e-14,114;UBERON:0002616,1.11e-13,46;UBERON:0002346,1.16e-13,64;UBERON:0003075,1.16e-13,64;UBERON:0007284,1.16e-13,64;UBERON:0010371,5.55e-12,73;UBERON:0003103,1.57e-11,43;UBERON:0003076,1.79e-11,12;UBERON:0003057,1.79e-11,12;UBERON:0007100,2.38e-11,18;UBERON:0000948,2.38e-11,18;UBERON:0005498,2.38e-11,18;UBERON:0004140,2.38e-11,18;UBERON:0009881,2.38e-11,18;UBERON:0004141,2.38e-11,18;UBERON:0003084,2.38e-11,18;UBERON:0007005,2.38e-11,18;UBERON:0004139,2.38e-11,18;UBERON:0004291,2.38e-11,18;UBERON:0003528,1.80e-10,29;UBERON:0002791,1.80e-10,29;UBERON:0001893,1.80e-10,29;UBERON:0003080,1.09e-09,40;UBERON:0004535,3.77e-09,23;UBERON:0001009,3.77e-09,23;UBERON:0002780,6.27e-09,39;UBERON:0001890,6.27e-09,39;UBERON:0006240,6.27e-09,39;UBERON:0002619,2.80e-07,17;UBERON:0002021,2.81e-07,10;UBERON:0000411,2.81e-07,10;UBERON:0001950,2.81e-07,10;UBERON:0003056,2.89e-07,49;UBERON:0002240,7.20e-07,6;UBERON:0005174,7.20e-07,6;UBERON:0001137,7.20e-07,6 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0.233612640595526,0.129123323441576,0.281577444303333,0,0,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,0.850432901510698,0.198581902401771,0,0,0,0,0,0,0,0.252030129759931,0,0,0.61506478758457,0,0,0,0.204169356262369,0,0,0,0,0,0,0.629484089877886,0.405507724878058,0.367093504323363,3.12956537739216,1.09012578190223,1.31811709640683,0.388859798148567,0.279972843250725,1.43752564364972,0,0,0,0,0,0,1.21389876515759,1.5869729378161,1.90149421051854,0.677689064138264,0.889294796111139,0,0,2.1314403448383,0.599200221036809,2.30530983192933,0.207379224616955,0.945041568321835,0.210324961351382,4.57041575046086,4.19650227808066,0.857435594504678,0.766763768145891,1.83843757322004,14.3150645299205,6.63974158042976,5.52983519722476,1.31886287730194,1.09785172322892,0.52091337055676,7.2587579740359,6.19038871034848,3.97275444219706,4.12480019663135,2.98980529678116,2.23679334990361,0.151452386666368,0.453429360640713,0,0,1.3599426674155,0.539703191637817,0,0.448026887097336,2.10666630197628,0.340860645156116,0.259786004602869,0.70667914902068,0.281686839553361,0,0,7.11066703153331,0,0,0,0.5709193985953,0,0.29688427812965,0.693941307064543,0,0.461230994512117,0.301445281105245,0.587943535678524,0.628332956648377,0,3.7595832799177,0.884610551949874,0.647067399789637,0.883366073841574,0,0,2.63502717310392,2.09446706813455,0.255457055208591,0.11981512450592,0,0.381210681219194,5.84183493678809,4.57500602818627,2.1361239859187,4.69325664519146,4.60287823194595,5.40248915854856,3.56930778749067,0.101839363850316,0.248813941220186,0,0.420883711772948,1.43132487258974,0.919608417733892,0.540186389416048,0.60281927134286,0.95251098811859,0.384341160854549,0.655912071918102,0.776110112217047,1.29340795759705,0.378212160335639,0,0.219195732427575,0.556094498451196,0.348252166522167,0.823128545631774,0,0,0,0,1.24275463521301,2.11073453982987,2.70093092191522,1.65721314909647,2.16440654922144,3.70241070929708,4.88321283975857,4.82892122519315,4.2035523252181,5.75959474697182,5.74586124276833,6.72871119230603,7.74859933354261,6.80605357402257,6.1734952629771,2.73376933133365,1.74937841044784,0,0,0.213288250535234,0,0,0.403367049246685,0,0.380451252225118,0,0,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0.758671603812327,0.228497025219458,4.50830942692322,0.610953983535943,0.775809948670503,0.631222379012867,0.822074982615345,1.77132177575523,1.09899109488962,1.35736880313981,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,0,0,0,0.179397413521912,0,0.369506380333209,0.189491411770485,0.325929952884052,0.848725428875941,0.234690248288502,0,0.238043640886014,0.390267295715598,0,0.44292937929755,0.318909537314974,0,0.690739927463582,0.144649058581512,0,0,1.47529281905711,0.275936746304732,9.79358598925531,6.91548950893999,0,0.757412781613119,0,0.390438744296638,0.215423397732799,0.716906393857656,0,0.849229592366497,0.809621403349789,0.584511715822624,0,1.60660658210904,1.13552068166615,0.534196811001766,0,0.329940245945071,2.65490276679926,0.242780636154981,0.302323556964751,1.13163047853539,1.18120757152309,0.922305443831782,0.775284879504663,0.727067458955011,1.42598951353889,1.8962205476149,1.05418608574999,2.06271086496374,0,0.720244376125241,1.16422815404479,0.428674070063185,0.532020700926821,0.178368817602071,0.164549020602121,0,0.23467170806371,0.21183207086382,0,1.15420377059036,0,0.422190474497091,0.358117032009409,0.328281799490123,0,9.82754100655701,0.170870880797853,0,0,0,0,0.457556346413045,0.339956859987711,0,0,3.81868247206045,0.474503990371703,0.406638934253697,0.108005340821801,0.209088296014469,0.655087691238533,0.269728692769641,0.826534557253359,1.57053565190418,0.129614973291793,1.24267862617385,0,0.448549638131936,0.330916980914195,0.194451188344048,0.258319646955462,0.675824501963113,0.234714477291508,0,0,0,0.288030006257865,0,0.405450430580328,0.410843828659309,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0.201652370273681,0,0,0,3.17422537061296,0,0.269141569828427,0.335769232728157,1.54551675225752,0.187682475451182,0,0.214368379079066,0.501572104035363,3.3885110557024,0.460325236507177,4.58316410751517,2.749650917499,2.05524755931193,1.5107877947794,2.70009000092722,4.05289082901798,4.07828168085784,2.5888015587591,0.830298780673413,0.399024873401031,0,0.486213434136588,0.628839487883947,0.735374033800057,0.44449345560323,0.824140228955577,0.320919209591815,1.01078884705519,0.760437899670719,1.50901073108861,0.561849044819294,1.02440243847791,0.516919220600519,0.476293691283074,0.927074607558844,1.35036454324594,0.412085900803307,0.883193520806384,1.37147700954166,0.532427418478012,0.476872379894642,0.581385666529314,0.188218760830661,0.676916863133412,0.914639864363863,0.789209134313529,0.814824683075171,2.24456908663095,0.593175090620871,0.689531376628944,0,0.929621047115796,0.578719832943424,1.49886346762768,0,0.429742108096597,0.765153328275374,1.54413993383661,0.463735671240843 | |phase1_expression=0.640595388419176,0,0,0,0,0,0.233612640595526,0.129123323441576,0.281577444303333,0,0,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,0.850432901510698,0.198581902401771,0,0,0,0,0,0,0,0.252030129759931,0,0,0.61506478758457,0,0,0,0.204169356262369,0,0,0,0,0,0,0.629484089877886,0.405507724878058,0.367093504323363,3.12956537739216,1.09012578190223,1.31811709640683,0.388859798148567,0.279972843250725,1.43752564364972,0,0,0,0,0,0,1.21389876515759,1.5869729378161,1.90149421051854,0.677689064138264,0.889294796111139,0,0,2.1314403448383,0.599200221036809,2.30530983192933,0.207379224616955,0.945041568321835,0.210324961351382,4.57041575046086,4.19650227808066,0.857435594504678,0.766763768145891,1.83843757322004,14.3150645299205,6.63974158042976,5.52983519722476,1.31886287730194,1.09785172322892,0.52091337055676,7.2587579740359,6.19038871034848,3.97275444219706,4.12480019663135,2.98980529678116,2.23679334990361,0.151452386666368,0.453429360640713,0,0,1.3599426674155,0.539703191637817,0,0.448026887097336,2.10666630197628,0.340860645156116,0.259786004602869,0.70667914902068,0.281686839553361,0,0,7.11066703153331,0,0,0,0.5709193985953,0,0.29688427812965,0.693941307064543,0,0.461230994512117,0.301445281105245,0.587943535678524,0.628332956648377,0,3.7595832799177,0.884610551949874,0.647067399789637,0.883366073841574,0,0,2.63502717310392,2.09446706813455,0.255457055208591,0.11981512450592,0,0.381210681219194,5.84183493678809,4.57500602818627,2.1361239859187,4.69325664519146,4.60287823194595,5.40248915854856,3.56930778749067,0.101839363850316,0.248813941220186,0,0.420883711772948,1.43132487258974,0.919608417733892,0.540186389416048,0.60281927134286,0.95251098811859,0.384341160854549,0.655912071918102,0.776110112217047,1.29340795759705,0.378212160335639,0,0.219195732427575,0.556094498451196,0.348252166522167,0.823128545631774,0,0,0,0,1.24275463521301,2.11073453982987,2.70093092191522,1.65721314909647,2.16440654922144,3.70241070929708,4.88321283975857,4.82892122519315,4.2035523252181,5.75959474697182,5.74586124276833,6.72871119230603,7.74859933354261,6.80605357402257,6.1734952629771,2.73376933133365,1.74937841044784,0,0,0.213288250535234,0,0,0.403367049246685,0,0.380451252225118,0,0,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0.758671603812327,0.228497025219458,4.50830942692322,0.610953983535943,0.775809948670503,0.631222379012867,0.822074982615345,1.77132177575523,1.09899109488962,1.35736880313981,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,0,0,0,0.179397413521912,0,0.369506380333209,0.189491411770485,0.325929952884052,0.848725428875941,0.234690248288502,0,0.238043640886014,0.390267295715598,0,0.44292937929755,0.318909537314974,0,0.690739927463582,0.144649058581512,0,0,1.47529281905711,0.275936746304732,9.79358598925531,6.91548950893999,0,0.757412781613119,0,0.390438744296638,0.215423397732799,0.716906393857656,0,0.849229592366497,0.809621403349789,0.584511715822624,0,1.60660658210904,1.13552068166615,0.534196811001766,0,0.329940245945071,2.65490276679926,0.242780636154981,0.302323556964751,1.13163047853539,1.18120757152309,0.922305443831782,0.775284879504663,0.727067458955011,1.42598951353889,1.8962205476149,1.05418608574999,2.06271086496374,0,0.720244376125241,1.16422815404479,0.428674070063185,0.532020700926821,0.178368817602071,0.164549020602121,0,0.23467170806371,0.21183207086382,0,1.15420377059036,0,0.422190474497091,0.358117032009409,0.328281799490123,0,9.82754100655701,0.170870880797853,0,0,0,0,0.457556346413045,0.339956859987711,0,0,3.81868247206045,0.474503990371703,0.406638934253697,0.108005340821801,0.209088296014469,0.655087691238533,0.269728692769641,0.826534557253359,1.57053565190418,0.129614973291793,1.24267862617385,0,0.448549638131936,0.330916980914195,0.194451188344048,0.258319646955462,0.675824501963113,0.234714477291508,0,0,0,0.288030006257865,0,0.405450430580328,0.410843828659309,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0.201652370273681,0,0,0,3.17422537061296,0,0.269141569828427,0.335769232728157,1.54551675225752,0.187682475451182,0,0.214368379079066,0.501572104035363,3.3885110557024,0.460325236507177,4.58316410751517,2.749650917499,2.05524755931193,1.5107877947794,2.70009000092722,4.05289082901798,4.07828168085784,2.5888015587591,0.830298780673413,0.399024873401031,0,0.486213434136588,0.628839487883947,0.735374033800057,0.44449345560323,0.824140228955577,0.320919209591815,1.01078884705519,0.760437899670719,1.50901073108861,0.561849044819294,1.02440243847791,0.516919220600519,0.476293691283074,0.927074607558844,1.35036454324594,0.412085900803307,0.883193520806384,1.37147700954166,0.532427418478012,0.476872379894642,0.581385666529314,0.188218760830661,0.676916863133412,0.914639864363863,0.789209134313529,0.814824683075171,2.24456908663095,0.593175090620871,0.689531376628944,0,0.929621047115796,0.578719832943424,1.49886346762768,0,0.429742108096597,0.765153328275374,1.54413993383661,0.463735671240843 | ||
|short_description=p3@Vegfb | |||
}} | }} |
Latest revision as of 03:36, 26 September 2015
Short description: | p3@Vegfb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Vegfb_5end |
Coexpression cluster: | MCL_coexpression_mm9:1163 |
Association with transcript: | 10bp_to_ENSMUST00000130048_5end |
EntrezGene: | Vegfb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.95e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.95e-09 | 23 |