FFCP PHASE1:Mm9::chr17:27702623..27702702,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=106672 | |EntrezGene=106672 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=247 | |MCL_coexpression_id=247 | ||
|TSSclassifier=NA | |||
|UniProt=D6RHA8,Q3V2N7,Q8R043 | |UniProt=D6RHA8,Q3V2N7,Q8R043 | ||
|association_with_transcript=0bp_to_ENSMUST00000080190,ENSMUST00000138728,ENSMUST00000154473,NM_001002895,uc008bpe.1_5end | |association_with_transcript=0bp_to_ENSMUST00000080190,ENSMUST00000138728,ENSMUST00000154473,NM_001002895,uc008bpe.1_5end | ||
|cluster_id=chr17:27702623..27702702,- | |||
|description=CAGE_peak_1_at_AI413582_5end | |description=CAGE_peak_1_at_AI413582_5end | ||
|id=chr17:27702623..27702702,- | |id=chr17:27702623..27702702,- | ||
|ontology_enrichment_celltype=CL:0002371!6.65e-19!118;CL:0000548!1.36e-17!115;CL:0000004!1.36e-17!115;CL:0000255!1.36e-17!115;CL:0000144!1.81e-17!121;CL:0000012!1.81e-17!121;CL:0000055!2.12e-15!50;CL:0000723!1.31e-14!91;CL:0000048!1.31e-14!91;CL:0000034!1.79e-13!97;CL:0002319!1.87e-13!43;CL:0000221!3.98e-13!44;CL:0000133!3.98e-13!44;CL:0000393!2.77e-10!39;CL:0000211!2.77e-10!39;CL:0002321!5.42e-10!70;CL:0000220!5.42e-10!70;CL:0000219!1.65e-08!54;CL:0000540!3.49e-08!33;CL:0000047!3.49e-08!33;CL:0000031!3.49e-08!33;CL:0000404!3.49e-08!33;CL:0000333!4.81e-07!10;CL:0000095!4.81e-07!10;CL:0000243!4.81e-07!10;CL:0000123!4.81e-07!10;CL:0000125!4.81e-07!10;CL:0000030!4.81e-07!10;CL:0000339!4.81e-07!10 | |ontology_enrichment_celltype=CL:0002371!6.65e-19!118;CL:0000548!1.36e-17!115;CL:0000004!1.36e-17!115;CL:0000255!1.36e-17!115;CL:0000144!1.81e-17!121;CL:0000012!1.81e-17!121;CL:0000055!2.12e-15!50;CL:0000723!1.31e-14!91;CL:0000048!1.31e-14!91;CL:0000034!1.79e-13!97;CL:0002319!1.87e-13!43;CL:0000221!3.98e-13!44;CL:0000133!3.98e-13!44;CL:0000393!2.77e-10!39;CL:0000211!2.77e-10!39;CL:0002321!5.42e-10!70;CL:0000220!5.42e-10!70;CL:0000219!1.65e-08!54;CL:0000540!3.49e-08!33;CL:0000047!3.49e-08!33;CL:0000031!3.49e-08!33;CL:0000404!3.49e-08!33;CL:0000333!4.81e-07!10;CL:0000095!4.81e-07!10;CL:0000243!4.81e-07!10;CL:0000123!4.81e-07!10;CL:0000125!4.81e-07!10;CL:0000030!4.81e-07!10;CL:0000339!4.81e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000723,1.32e-14,91;CL:0000048,1.32e-14,91;CL:0000034,1.81e-13,97;CL:0002319,1.87e-13,43;CL:0000221,3.98e-13,44;CL:0000133,3.98e-13,44;CL:0000393,2.77e-10,39;CL:0000211,2.77e-10,39;CL:0002321,5.46e-10,70;CL:0000219,1.66e-08,54;CL:0000540,3.49e-08,33;CL:0000047,3.49e-08,33;CL:0000031,3.49e-08,33;CL:0000404,3.49e-08,33;CL:0000333,4.81e-07,10;CL:0000095,4.81e-07,10;CL:0000243,4.81e-07,10;CL:0000123,4.81e-07,10;CL:0000125,4.81e-07,10;CL:0000030,4.81e-07,10;CL:0000339,4.81e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.15e-21!75;UBERON:0001016!7.15e-21!75;UBERON:0001017!7.11e-20!73;UBERON:0005743!7.11e-20!73;UBERON:0004121!1.07e-13!102;UBERON:0000924!1.07e-13!102;UBERON:0006601!1.07e-13!102;UBERON:0001049!1.82e-12!52;UBERON:0005068!1.82e-12!52;UBERON:0006241!1.82e-12!52;UBERON:0007135!1.82e-12!52;UBERON:0002616!1.19e-11!49;UBERON:0000955!1.52e-11!50;UBERON:0006238!1.52e-11!50;UBERON:0002020!6.70e-11!34;UBERON:0000064!1.35e-09!99;UBERON:0002791!6.28e-09!29;UBERON:0003528!6.28e-09!29;UBERON:0001893!6.28e-09!29;UBERON:0007811!1.17e-08!86;UBERON:0002346!2.04e-08!71;UBERON:0003075!2.04e-08!71;UBERON:0007284!2.04e-08!71;UBERON:0000033!2.34e-08!63;UBERON:0003080!1.11e-07!40;UBERON:0002780!1.93e-07!39;UBERON:0001890!1.93e-07!39;UBERON:0006240!1.93e-07!39;UBERON:0002619!2.18e-07!17;UBERON:0002021!4.16e-07!10;UBERON:0000411!4.16e-07!10;UBERON:0001950!4.16e-07!10 | |ontology_enrichment_uberon=UBERON:0000073!7.15e-21!75;UBERON:0001016!7.15e-21!75;UBERON:0001017!7.11e-20!73;UBERON:0005743!7.11e-20!73;UBERON:0004121!1.07e-13!102;UBERON:0000924!1.07e-13!102;UBERON:0006601!1.07e-13!102;UBERON:0001049!1.82e-12!52;UBERON:0005068!1.82e-12!52;UBERON:0006241!1.82e-12!52;UBERON:0007135!1.82e-12!52;UBERON:0002616!1.19e-11!49;UBERON:0000955!1.52e-11!50;UBERON:0006238!1.52e-11!50;UBERON:0002020!6.70e-11!34;UBERON:0000064!1.35e-09!99;UBERON:0002791!6.28e-09!29;UBERON:0003528!6.28e-09!29;UBERON:0001893!6.28e-09!29;UBERON:0007811!1.17e-08!86;UBERON:0002346!2.04e-08!71;UBERON:0003075!2.04e-08!71;UBERON:0007284!2.04e-08!71;UBERON:0000033!2.34e-08!63;UBERON:0003080!1.11e-07!40;UBERON:0002780!1.93e-07!39;UBERON:0001890!1.93e-07!39;UBERON:0006240!1.93e-07!39;UBERON:0002619!2.18e-07!17;UBERON:0002021!4.16e-07!10;UBERON:0000411!4.16e-07!10;UBERON:0001950!4.16e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.15e-21,75;UBERON:0001017,7.11e-20,73;UBERON:0004121,2.73e-15,95;UBERON:0000924,2.73e-15,95;UBERON:0006601,2.73e-15,95;UBERON:0000073,1.13e-13,54;UBERON:0001049,1.82e-12,52;UBERON:0005068,1.82e-12,52;UBERON:0006241,1.82e-12,52;UBERON:0007135,1.82e-12,52;UBERON:0002020,6.70e-11,34;UBERON:0002616,3.66e-10,46;UBERON:0000955,4.55e-10,47;UBERON:0006238,4.55e-10,47;UBERON:0002346,6.55e-10,64;UBERON:0003075,6.55e-10,64;UBERON:0007284,6.55e-10,64;UBERON:0003528,6.28e-09,29;UBERON:0002791,6.28e-09,29;UBERON:0001893,6.28e-09,29;UBERON:0010371,3.94e-08,73;UBERON:0003080,1.11e-07,40;UBERON:0002780,1.93e-07,39;UBERON:0001890,1.93e-07,39;UBERON:0006240,1.93e-07,39;UBERON:0002619,2.18e-07,17;UBERON:0002021,4.16e-07,10;UBERON:0000411,4.16e-07,10;UBERON:0001950,4.16e-07,10 | |||
|phase1_expression=11.2104192973356,14.3079917132138,17.2899710968024,5.14189159221611,3.00537437967808,12.5909453933917,12.3814699515629,34.6050506823424,6.335492496825,10.7669682108117,6.33506482434368,4.3874687447435,38.0065620447277,33.044912114381,10.9926221399169,10.5287139042709,12.5921138063066,30.4420989570699,27.834230021965,28.8584963222661,14.7124891961351,20.751808800985,18.8063848180033,19.9990528491758,21.3350631392468,16.0784949952206,18.9535278309993,22.1935369666466,12.9215925230334,12.3494763582366,18.4036323843903,15.2407361630311,23.9875267157982,0,7.79899373328441,5.81821258754723,7.55426618170766,36.412251874111,45.3174499823804,24.0820922227947,34.7056577938298,45.0810020072574,27.6740901227758,28.578577680456,30.5144562970739,26.4307323112821,103.275657453941,56.9045658152965,43.0584918159565,57.1623903278393,74.0528170398168,69.0012308951864,23.4895648480831,26.8383992544197,20.1656279485478,39.1034342774639,42.9800159908135,26.2992767061496,26.3011399117477,33.3264316941381,37.3960528068646,78.2730869079695,80.9258264461137,203.827285964237,196.784406150828,223.090756093075,68.0092250876779,58.7854007141978,7.77672092313582,10.1254453748768,11.7781978356774,39.7054868321287,46.3823935998388,11.6366259254206,9.77623804386011,18.3843757322004,63.8672109796454,54.1394313481196,45.0067142440793,18.3321939944969,21.4995962465663,17.7110545989298,85.1508146954212,79.9122906244986,59.8969131285096,35.9446874277875,33.0302299453919,22.7407323906867,34.5311441599319,39.3727828156353,14.4932244350839,9.46466264679525,12.9194553404473,5.39703191637817,0.649776417447669,1.79210754838934,10.5333315098814,39.7102651606875,54.2952749619996,55.1209736236131,9.71819596459095,19.2489716121477,12.7402619853323,0,29.6592726185363,32.9367825117628,31.8480400359313,6.73684890342454,22.7865337609511,9.64873903921361,7.11289839741157,7.61163695780353,8.99400439298628,12.9621470875255,7.99603208522793,9.04799457573663,22.494742063828,5.06097749219691,10.6153266233985,6.47067399789637,8.61281921995535,7.27312879702833,14.9113408974498,32.7914492652933,31.6264527288317,6.64188343542338,15.6957813102756,25.7958174327165,18.2981126985213,25.6141993382247,29.2800385803921,13.3193613239636,38.0675261221085,45.2616359474685,31.9993588621723,32.6104938766193,5.39748628406676,9.45492976636707,21.4814344668623,15.1518136238261,5.59517904739626,9.88579049063934,6.84236093260327,7.83665052745718,7.34794190834341,6.79002717509704,7.96464658757695,13.7112786491678,2.80238390812695,4.72765200419548,4.39877810409872,7.89104636739269,7.78532297831674,5.2237824978325,10.906453229621,5.37392520409932,20.3641824320838,29.0803135039628,21.3122624546694,6.00664740352955,4.69052119962192,5.94204802821349,4.7348947117042,5.70616272067471,7.25055430570678,6.51095045301142,8.31647544338819,5.02090972178829,3.78487654801005,7.38753588355929,7.29619285912702,5.84799949701329,6.36695334344047,8.58921080066379,28.5994330047213,14.9211687949962,9.25172592354634,3.17340679996253,4.90562976231038,5.10920678092965,5.67016829817211,6.85723983719365,11.1189021922435,17.1203063501303,9.49058123089023,22.8931547066375,25.6361912976275,20.2935601481974,16.9618755793635,4.49409704327111,12.9682829924817,8.36393347668342,5.12103332573321,5.1411830674378,3.38123207019241,7.73875045812194,8.33995694820791,5.82127305089644,7.33543830641385,5.46157547524528,9.89091985400661,11.7227305725711,2.37162101669719,6.00642380577939,4.32429789249047,4.49724224769707,4.26006254915856,6.02942899381042,5.60176873919124,5.75392274901621,8.10676133875177,7.4131581560782,0,6.69853705803306,6.55279113540577,5.30415643688935,4.12614051100398,3.37710464954357,12.9327233116623,7.76914788258988,4.4000543639347,5.94107800213158,7.74477819352057,6.86775655511445,4.28478553594825,6.43941037930736,6.62067605246002,5.53661724121937,7.81328366421687,11.4704320301017,15.0235934223329,11.4272756279394,70.871903451458,63.0930593229703,6.88469982226651,4.41498794087572,30.5046120976805,37.2733163363206,19.0164536636943,5.80683132570058,18.2994767261429,24.2072021463916,15.0796378412959,28.1983181584011,26.2902435417225,26.0430408325726,27.5271277138928,28.6410740753086,27.6701444562566,12.5315313404505,9.36804562374573,12.9987890677096,5.53815661802159,9.73323725537959,7.96470830039777,5.58395463156457,11.1859716076958,8.86443874852721,11.5167738223501,12.2974059177571,15.5056975900933,11.2695456138027,10.3384239731569,13.2735438333043,16.8669773719998,14.4389760547462,13.6175842301515,5.76195500900193,13.5826617971892,7.71613326113732,7.98031051390231,11.0588666913284,9.70839221552514,12.4830629136986,22.5284839741162,25.2080164327946,25.1402373782657,15.4993077764991,9.52640117505843,8.62474826472629,10.9822556482886,9.68431308495861,9.32738677215522,28.9263471136395,12.3027034174454,10.9385040020508,10.3708935327039,11.6788443342908,9.02181902958766,17.8446975101088,6.62915876976036,6.85762116385924,6.21899882119907,25.7761066864081,5.06137589729817,5.08298667817122,6.9123418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|phase1_expression=11.2104192973356,14.3079917132138,17.2899710968024,5.14189159221611,3.00537437967808,12.5909453933917,12.3814699515629,34.6050506823424,6.335492496825,10.7669682108117,6.33506482434368,4.3874687447435,38.0065620447277,33.044912114381,10.9926221399169,10.5287139042709,12.5921138063066,30.4420989570699,27.834230021965,28.8584963222661,14.7124891961351,20.751808800985,18.8063848180033,19.9990528491758,21.3350631392468,16.0784949952206,18.9535278309993,22.1935369666466,12.9215925230334,12.3494763582366,18.4036323843903,15.2407361630311,23.9875267157982,0,7.79899373328441,5.81821258754723,7.55426618170766,36.412251874111,45.3174499823804,24.0820922227947,34.7056577938298,45.0810020072574,27.6740901227758,28.578577680456,30.5144562970739,26.4307323112821,103.275657453941,56.9045658152965,43.0584918159565,57.1623903278393,74.0528170398168,69.0012308951864,23.4895648480831,26.8383992544197,20.1656279485478,39.1034342774639,42.9800159908135,26.2992767061496,26.3011399117477,33.3264316941381,37.3960528068646,78.2730869079695,80.9258264461137,203.827285964237,196.784406150828,223.090756093075,68.0092250876779,58.7854007141978,7.77672092313582,10.1254453748768,11.7781978356774,39.7054868321287,46.3823935998388,11.6366259254206,9.77623804386011,18.3843757322004,63.8672109796454,54.1394313481196,45.0067142440793,18.3321939944969,21.4995962465663,17.7110545989298,85.1508146954212,79.9122906244986,59.8969131285096,35.9446874277875,33.0302299453919,22.7407323906867,34.5311441599319,39.3727828156353,14.4932244350839,9.46466264679525,12.9194553404473,5.39703191637817,0.649776417447669,1.79210754838934,10.5333315098814,39.7102651606875,54.2952749619996,55.1209736236131,9.71819596459095,19.2489716121477,12.7402619853323,0,29.6592726185363,32.9367825117628,31.8480400359313,6.73684890342454,22.7865337609511,9.64873903921361,7.11289839741157,7.61163695780353,8.99400439298628,12.9621470875255,7.99603208522793,9.04799457573663,22.494742063828,5.06097749219691,10.6153266233985,6.47067399789637,8.61281921995535,7.27312879702833,14.9113408974498,32.7914492652933,31.6264527288317,6.64188343542338,15.6957813102756,25.7958174327165,18.2981126985213,25.6141993382247,29.2800385803921,13.3193613239636,38.0675261221085,45.2616359474685,31.9993588621723,32.6104938766193,5.39748628406676,9.45492976636707,21.4814344668623,15.1518136238261,5.59517904739626,9.88579049063934,6.84236093260327,7.83665052745718,7.34794190834341,6.79002717509704,7.96464658757695,13.7112786491678,2.80238390812695,4.72765200419548,4.39877810409872,7.89104636739269,7.78532297831674,5.2237824978325,10.906453229621,5.37392520409932,20.3641824320838,29.0803135039628,21.3122624546694,6.00664740352955,4.69052119962192,5.94204802821349,4.7348947117042,5.70616272067471,7.25055430570678,6.51095045301142,8.31647544338819,5.02090972178829,3.78487654801005,7.38753588355929,7.29619285912702,5.84799949701329,6.36695334344047,8.58921080066379,28.5994330047213,14.9211687949962,9.25172592354634,3.17340679996253,4.90562976231038,5.10920678092965,5.67016829817211,6.85723983719365,11.1189021922435,17.1203063501303,9.49058123089023,22.8931547066375,25.6361912976275,20.2935601481974,16.9618755793635,4.49409704327111,12.9682829924817,8.36393347668342,5.12103332573321,5.1411830674378,3.38123207019241,7.73875045812194,8.33995694820791,5.82127305089644,7.33543830641385,5.46157547524528,9.89091985400661,11.7227305725711,2.37162101669719,6.00642380577939,4.32429789249047,4.49724224769707,4.26006254915856,6.02942899381042,5.60176873919124,5.75392274901621,8.10676133875177,7.4131581560782,0,6.69853705803306,6.55279113540577,5.30415643688935,4.12614051100398,3.37710464954357,12.9327233116623,7.76914788258988,4.4000543639347,5.94107800213158,7.74477819352057,6.86775655511445,4.28478553594825,6.43941037930736,6.62067605246002,5.53661724121937,7.81328366421687,11.4704320301017,15.0235934223329,11.4272756279394,70.871903451458,63.0930593229703,6.88469982226651,4.41498794087572,30.5046120976805,37.2733163363206,19.0164536636943,5.80683132570058,18.2994767261429,24.2072021463916,15.0796378412959,28.1983181584011,26.2902435417225,26.0430408325726,27.5271277138928,28.6410740753086,27.6701444562566,12.5315313404505,9.36804562374573,12.9987890677096,5.53815661802159,9.73323725537959,7.96470830039777,5.58395463156457,11.1859716076958,8.86443874852721,11.5167738223501,12.2974059177571,15.5056975900933,11.2695456138027,10.3384239731569,13.2735438333043,16.8669773719998,14.4389760547462,13.6175842301515,5.76195500900193,13.5826617971892,7.71613326113732,7.98031051390231,11.0588666913284,9.70839221552514,12.4830629136986,22.5284839741162,25.2080164327946,25.1402373782657,15.4993077764991,9.52640117505843,8.62474826472629,10.9822556482886,9.68431308495861,9.32738677215522,28.9263471136395,12.3027034174454,10.9385040020508,10.3708935327039,11.6788443342908,9.02181902958766,17.8446975101088,6.62915876976036,6.85762116385924,6.21899882119907,25.7761066864081,5.06137589729817,5.08298667817122,6.9123418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| ||
|short_description=p1@AI413582 | |short_description=p1@AI413582 | ||
}} | }} |
Latest revision as of 03:41, 26 September 2015
Short description: | p1@AI413582 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AI413582_5end |
Coexpression cluster: | MCL_coexpression_mm9:247 |
Association with transcript: | 0bp_to_ENSMUST00000080190, ENSMUST00000138728, ENSMUST00000154473, NM_001002895, uc008bpe.1_5end |
EntrezGene: | AI413582 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 1.32e-14 | 91 |
multi fate stem cell | 1.32e-14 | 91 |
stem cell | 1.81e-13 | 97 |
neural cell | 1.87e-13 | 43 |
ectodermal cell | 3.98e-13 | 44 |
neurectodermal cell | 3.98e-13 | 44 |
electrically responsive cell | 2.77e-10 | 39 |
electrically active cell | 2.77e-10 | 39 |
embryonic cell | 5.46e-10 | 70 |
motile cell | 1.66e-08 | 54 |
neuron | 3.49e-08 | 33 |
neuronal stem cell | 3.49e-08 | 33 |
neuroblast | 3.49e-08 | 33 |
electrically signaling cell | 3.49e-08 | 33 |
migratory neural crest cell | 4.81e-07 | 10 |
neuron associated cell | 4.81e-07 | 10 |
glial cell (sensu Vertebrata) | 4.81e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 4.81e-07 | 10 |
glial cell | 4.81e-07 | 10 |
glioblast | 4.81e-07 | 10 |
glioblast (sensu Vertebrata) | 4.81e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
nervous system | 7.15e-21 | 75 |
central nervous system | 7.11e-20 | 73 |
ectoderm-derived structure | 2.73e-15 | 95 |
ectoderm | 2.73e-15 | 95 |
presumptive ectoderm | 2.73e-15 | 95 |
regional part of nervous system | 1.13e-13 | 54 |
neural tube | 1.82e-12 | 52 |
neural rod | 1.82e-12 | 52 |
future spinal cord | 1.82e-12 | 52 |
neural keel | 1.82e-12 | 52 |
gray matter | 6.70e-11 | 34 |
regional part of brain | 3.66e-10 | 46 |
brain | 4.55e-10 | 47 |
future brain | 4.55e-10 | 47 |
neurectoderm | 6.55e-10 | 64 |
neural plate | 6.55e-10 | 64 |
presumptive neural plate | 6.55e-10 | 64 |
brain grey matter | 6.28e-09 | 29 |
regional part of telencephalon | 6.28e-09 | 29 |
telencephalon | 6.28e-09 | 29 |
ecto-epithelium | 3.94e-08 | 73 |
anterior neural tube | 1.11e-07 | 40 |
regional part of forebrain | 1.93e-07 | 39 |
forebrain | 1.93e-07 | 39 |
future forebrain | 1.93e-07 | 39 |
regional part of cerebral cortex | 2.18e-07 | 17 |
occipital lobe | 4.16e-07 | 10 |
visual cortex | 4.16e-07 | 10 |
neocortex | 4.16e-07 | 10 |