FFCP PHASE1:Mm9::chr5:67067470..67067496,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22223 | |EntrezGene=22223 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q9R0P9 | |UniProt=Q9R0P9 | ||
|association_with_transcript=110bp_to_ENSMUST00000031131,NM_011670,uc008xpf.2_5end | |association_with_transcript=110bp_to_ENSMUST00000031131,NM_011670,uc008xpf.2_5end | ||
|cluster_id=chr5:67067470..67067496,+ | |||
|description=CAGE_peak_1_at_Uchl1_5end | |description=CAGE_peak_1_at_Uchl1_5end | ||
|id=chr5:67067470..67067496,+ | |id=chr5:67067470..67067496,+ | ||
|ontology_enrichment_celltype=CL:0000221!5.70e-20!44;CL:0000133!5.70e-20!44;CL:0002319!1.57e-19!43;CL:0000540!6.11e-19!33;CL:0000047!6.11e-19!33;CL:0000031!6.11e-19!33;CL:0000404!6.11e-19!33;CL:0000117!2.47e-15!23;CL:0000337!2.47e-15!23;CL:0000055!1.01e-14!50;CL:0000393!2.24e-14!39;CL:0000211!2.24e-14!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.12e-20,44;CL:0000133,5.12e-20,44;CL:0002319,1.42e-19,43;CL:0000540,5.51e-19,33;CL:0000047,5.51e-19,33;CL:0000031,5.51e-19,33;CL:0000404,5.51e-19,33;CL:0000117,2.28e-15,23;CL:0000337,2.28e-15,23;CL:0000393,2.08e-14,39;CL:0000211,2.08e-14,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.36e-36!75;UBERON:0001016!7.36e-36!75;UBERON:0001017!3.59e-35!73;UBERON:0005743!3.59e-35!73;UBERON:0004121!1.07e-33!102;UBERON:0000924!1.07e-33!102;UBERON:0006601!1.07e-33!102;UBERON:0002346!1.55e-30!71;UBERON:0003075!1.55e-30!71;UBERON:0007284!1.55e-30!71;UBERON:0001049!1.02e-24!52;UBERON:0005068!1.02e-24!52;UBERON:0006241!1.02e-24!52;UBERON:0007135!1.02e-24!52;UBERON:0000033!1.20e-24!63;UBERON:0000955!4.21e-23!50;UBERON:0006238!4.21e-23!50;UBERON:0002616!1.08e-22!49;UBERON:0003056!1.91e-21!49;UBERON:0003080!1.72e-19!40;UBERON:0002020!3.87e-19!34;UBERON:0002780!5.42e-19!39;UBERON:0001890!5.42e-19!39;UBERON:0006240!5.42e-19!39;UBERON:0002791!7.24e-16!29;UBERON:0003528!7.24e-16!29;UBERON:0001893!7.24e-16!29;UBERON:0000956!9.85e-11!21;UBERON:0001869!9.85e-11!21;UBERON:0000203!9.85e-11!21;UBERON:0007811!1.64e-09!86;UBERON:0002619!7.38e-09!17;UBERON:0000153!1.19e-08!94;UBERON:0000468!8.78e-08!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.01e-36,75;UBERON:0001017,2.94e-35,73;UBERON:0004121,3.97e-31,95;UBERON:0000924,3.97e-31,95;UBERON:0006601,3.97e-31,95;UBERON:0002346,1.62e-28,64;UBERON:0003075,1.62e-28,64;UBERON:0007284,1.62e-28,64;UBERON:0010314,8.30e-28,92;UBERON:0000073,3.09e-26,54;UBERON:0001049,8.89e-25,52;UBERON:0005068,8.89e-25,52;UBERON:0006241,8.89e-25,52;UBERON:0007135,8.89e-25,52;UBERON:0010371,2.24e-23,73;UBERON:0003056,1.70e-21,49;UBERON:0000955,4.22e-21,47;UBERON:0006238,4.22e-21,47;UBERON:0002616,1.07e-20,46;UBERON:0003080,1.55e-19,40;UBERON:0002020,3.49e-19,34;UBERON:0002780,4.89e-19,39;UBERON:0001890,4.89e-19,39;UBERON:0006240,4.89e-19,39;UBERON:0003528,6.66e-16,29;UBERON:0002791,6.66e-16,29;UBERON:0001893,6.66e-16,29;UBERON:0000956,9.33e-11,21;UBERON:0001869,9.33e-11,21;UBERON:0000203,9.33e-11,21;UBERON:0002619,7.08e-09,17 | |||
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|phase1_expression=163.35182404689,0.348975407639361,0.454999239389536,0,0,0.503637815735669,0,0.129123323441576,0,0,0,0,0,0,1.33243904726265,0.809901069559304,0,1.89277299214943,1.91960207048034,2.12194825899015,159.115995872652,0,0,0.159992422793407,0,0,0,0,0,0.504060259519861,0.665191531965914,0,0,0,0,0.166234645358492,0,0,0,0,0.588231488031014,0,0.485510353031154,2.14024590558481,1.4192770370732,2.0190142737785,14.8654355426127,135.829672425018,110.282463732705,60.6621285111764,62.2939576232863,89.1265899062824,1.67782606057736,0,1.68046899571232,23.6678681153071,14.6132054368766,15.4701627683233,1053.05717877421,1398.65214919525,926.027680522528,54.2151251310611,27.5681386794453,5.84934816232909,2.96659908770092,6.3943210345149,174.66686443223,319.669630027533,406.152211412307,573.100208218027,464.1871897025,1019.20271235277,913.291416834922,554.148375648452,670.726606185618,540.500646526692,829.172583925397,853.079105747139,928.090673934223,1155.71953937969,1673.03453855727,1080.89524390528,1206.07055568597,1032.66938940813,893.411354751009,784.301294530903,764.820669252781,876.263794824738,120.253195013096,261.628741089691,1.15945795480671,0.860423876981386,0,2.69851595818909,0.649776417447669,0,46.0657698032146,0,0,0,317.461068176638,0,0,0,10.6080610095495,9.62767488805375,12.1325866803548,26.3764762151029,0.776813650941515,88.3230727435707,174.699724053499,258.491191087008,197.406865651186,234.675151340433,194.256544188184,47.8789712966064,9.64060374164058,20.2439099687876,10.6153266233985,32.029836289587,13.2504911076236,11.6370060752453,14.9113408974498,110.671141270365,116.242922281468,12.517395705221,6.70964697233154,5.99902730993408,4.70159840170339,463.302447679117,409.463039522671,737.591046902514,554.847230053746,620.877130398042,896.813200319061,700.557773926578,44.7074807302889,12.6895110022295,15.6688110228878,29.6723016799928,68.1831121124567,196.796201395053,224.897600126881,168.638691158165,150.292626625283,159.885922915493,167.819788686474,169.450707834055,17.4610074275602,33.2826701095362,38.7092473160687,53.2645629799007,38.0924731439069,17.7608604926305,12.7584924572925,26.6705917536781,1.40442637462647,0.772043721344145,1.13665399758237,74.3581523402452,94.983054292344,89.8509686690464,80.9666995701419,68.8674811115913,62.1696464936134,44.6465173920783,55.5325940897212,44.2540647571572,28.6334138849456,27.2517990371298,23.1856795301147,13.5965988305559,11.1970558798436,18.3862793701709,513.10747449647,639.346356712494,0.330418782983798,9.25576983322405,42.870938357582,45.0539143409251,51.2892496061931,38.7232367276818,33.3567065767305,35.1917408308234,18.9811624617805,53.1977623758555,39.7109629904426,53.1213780349873,36.8482124655137,13.4822911298133,12.752144942607,18.3209971394018,63.9180826211885,54.6107890274504,24.7957018480777,23.4199027022111,26.3775382547971,27.4932413970049,13.0899631847213,5.75679577120448,5.02395929092399,8.76119863844784,0,3.83743743147016,3.14494392181125,1.57403478669398,2.63718157805054,1.4470629585145,3.31013607315846,2.01387296215567,2.7562988551756,1.37280706594041,1.43768206527355,1.48856379067401,1.5601883655728,0,0,0.482443521363367,8.31389355749721,50.4047155309489,32.2670653355211,35.4767229270143,27.2240688014662,17.4206507739488,10.9500074807566,19.1230974900643,9.77337893458384,10.4088404134924,9.08892181347676,9.99566219766002,7.59813920209941,8.38964539772767,0,6.52686820582452,0.491764273019036,2.48343071674259,824.587830177299,907.804512656614,0,11.3611917241968,359.0483536957,368.574174616027,359.541650816041,151.028280306013,191.606859710859,185.415127666685,281.748248365726,395.422175754005,342.319215701689,244.525521796995,48.2596289708113,69.2675198265623,74.1135665058771,5.1140738121486,5.30980553359851,28.6481150662878,19.0463840887793,16.597247018519,20.0805287158925,16.908933136916,24.0338312646446,14.9048829085777,18.8943610543902,14.5376908650475,2.10837217149998,2.06271086496374,160.687493915788,98.8535406231893,133.239444296237,120.886087757818,100.374572241527,263.450743598258,307.21302146416,422.292884421949,12.4376005273766,28.5973295666157,64.6148206301038,2.4732937941222,5.16686165426898,4.1012788951146,1.67121281604391,2.79039529566604,20.1121777274597,762.839692471237,1.02522528478712,9.49379592630823,5.74103034846106,2.63715839806567,1.91371918809435,1.83022538565218,20.0574547392749,19.4532518729885,20.3153961492503,9.54670618015114,45.0778790853118,36.8008235499596,41.1500348531063,42.6540123869516,44.1092378767279,38.5712030660587,34.7971048603664,21.2022313007064,16.8499465279331,3.72803587852155,97.5188783923649,33.4917063138513,62.0469339214116,119.004127266557,81.4998486144483,41.901119121713,32.1558833889366,145.568502255536,302.519208668176,102.914835471879,63.3666013767304,1.58005560314089,30.0033318629443,17.5635736751855,5.3267537420896,6.62398773969681,2.18549490259391,2.64429988943931,3.83992770653901,1.9183625490148,2.057583779685,1.20991422164209,1.46186821109629,0.865906574762965,1.9869073370866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| ||
|short_description=p1@Uchl1 | |short_description=p1@Uchl1 | ||
}} | }} |
Latest revision as of 04:11, 26 September 2015
Short description: | p1@Uchl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Uchl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 110bp_to_ENSMUST00000031131, NM_011670, uc008xpf.2_5end |
EntrezGene: | Uchl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.12e-20 | 44 |
neurectodermal cell | 5.12e-20 | 44 |
neural cell | 1.42e-19 | 43 |
neuron | 5.51e-19 | 33 |
neuronal stem cell | 5.51e-19 | 33 |
neuroblast | 5.51e-19 | 33 |
electrically signaling cell | 5.51e-19 | 33 |
CNS neuron (sensu Vertebrata) | 2.28e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.28e-15 | 23 |
electrically responsive cell | 2.08e-14 | 39 |
electrically active cell | 2.08e-14 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 6.01e-36 | 75 |
central nervous system | 2.94e-35 | 73 |
ectoderm-derived structure | 3.97e-31 | 95 |
ectoderm | 3.97e-31 | 95 |
presumptive ectoderm | 3.97e-31 | 95 |
neurectoderm | 1.62e-28 | 64 |
neural plate | 1.62e-28 | 64 |
presumptive neural plate | 1.62e-28 | 64 |
structure with developmental contribution from neural crest | 8.30e-28 | 92 |
regional part of nervous system | 3.09e-26 | 54 |
neural tube | 8.89e-25 | 52 |
neural rod | 8.89e-25 | 52 |
future spinal cord | 8.89e-25 | 52 |
neural keel | 8.89e-25 | 52 |
ecto-epithelium | 2.24e-23 | 73 |
pre-chordal neural plate | 1.70e-21 | 49 |
brain | 4.22e-21 | 47 |
future brain | 4.22e-21 | 47 |
regional part of brain | 1.07e-20 | 46 |
anterior neural tube | 1.55e-19 | 40 |
gray matter | 3.49e-19 | 34 |
regional part of forebrain | 4.89e-19 | 39 |
forebrain | 4.89e-19 | 39 |
future forebrain | 4.89e-19 | 39 |
brain grey matter | 6.66e-16 | 29 |
regional part of telencephalon | 6.66e-16 | 29 |
telencephalon | 6.66e-16 | 29 |
cerebral cortex | 9.33e-11 | 21 |
cerebral hemisphere | 9.33e-11 | 21 |
pallium | 9.33e-11 | 21 |
regional part of cerebral cortex | 7.08e-09 | 17 |