FFCP PHASE1:Mm9::chr19:8788816..8788826,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17254 | |EntrezGene=17254 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=310 | |||
|TSSclassifier=NA | |||
|UniProt=P10852 | |UniProt=P10852 | ||
|association_with_transcript=-429bp_to_ENSMUST00000010239,NM_008577,uc012bib.1_5end | |association_with_transcript=-429bp_to_ENSMUST00000010239,NM_008577,uc012bib.1_5end | ||
|cluster_id=chr19:8788816..8788826,- | |||
|description=CAGE_peak_14_at_Slc3a2_5end | |description=CAGE_peak_14_at_Slc3a2_5end | ||
|id=chr19:8788816..8788826,- | |id=chr19:8788816..8788826,- | ||
|ontology_enrichment_celltype=CL:0002453!1.44e-20!8;CL:0000333!2.99e-16!10;CL:0000095!2.99e-16!10;CL:0000243!2.99e-16!10;CL:0000123!2.99e-16!10;CL:0000125!2.99e-16!10;CL:0000030!2.99e-16!10;CL:0000339!2.99e-16!10;CL:0000128!1.66e-14!6;CL:0000126!1.66e-14!6;CL:0000127!1.66e-14!6;CL:0002604!5.09e-08!2;CL:0002605!5.09e-08!2;CL:0000864!8.64e-08!2;CL:0000878!8.64e-08!2;CL:0000129!8.64e-08!2 | |ontology_enrichment_celltype=CL:0002453!1.44e-20!8;CL:0000333!2.99e-16!10;CL:0000095!2.99e-16!10;CL:0000243!2.99e-16!10;CL:0000123!2.99e-16!10;CL:0000125!2.99e-16!10;CL:0000030!2.99e-16!10;CL:0000339!2.99e-16!10;CL:0000128!1.66e-14!6;CL:0000126!1.66e-14!6;CL:0000127!1.66e-14!6;CL:0002604!5.09e-08!2;CL:0002605!5.09e-08!2;CL:0000864!8.64e-08!2;CL:0000878!8.64e-08!2;CL:0000129!8.64e-08!2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,9.18e-67,8;CL:0000333,1.74e-53,10;CL:0000095,1.74e-53,10;CL:0000243,1.74e-53,10;CL:0000123,1.74e-53,10;CL:0000125,1.74e-53,10;CL:0000030,1.74e-53,10;CL:0000339,1.74e-53,10;CL:0000128,4.13e-46,6;CL:0000126,4.13e-46,6;CL:0000127,4.13e-46,6;CL:0002605,3.06e-23,2;CL:0002604,3.06e-23,2;CL:0000878,1.80e-22,2;CL:0000129,1.80e-22,2;CL:0002319,1.52e-12,43;CL:0000221,2.93e-12,44;CL:0000133,2.93e-12,44;CL:0002194,9.19e-12,4;CL:0000766,9.19e-12,4;CL:0000234,9.19e-12,4;CL:0000576,9.19e-12,4;CL:0000235,9.19e-12,4;CL:0000864,9.19e-12,4;CL:0002009,9.19e-12,4;CL:0000040,9.19e-12,4;CL:0000559,9.19e-12,4;CL:0000219,5.55e-10,54;CL:0002321,1.12e-07,70;CL:0000473,4.05e-07,7;CL:0000557,4.05e-07,7;CL:0002603,6.68e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!5.33e-12!9;UBERON:0000019!5.33e-12!9;UBERON:0000047!5.33e-12!9;UBERON:0004088!5.33e-12!9;UBERON:0002104!5.33e-12!9;UBERON:0001456!5.33e-12!9;UBERON:0003072!5.33e-12!9;UBERON:0003071!5.33e-12!9;UBERON:0004128!5.33e-12!9;UBERON:0000020!7.31e-12!12;UBERON:0001032!7.31e-12!12;UBERON:0004456!7.31e-12!12;UBERON:0005085!7.01e-11!13;UBERON:0001444!1.04e-09!11;UBERON:0004121!1.52e-08!102;UBERON:0000924!1.52e-08!102;UBERON:0006601!1.52e-08!102;UBERON:0003056!2.23e-08!49;UBERON:0000033!2.49e-08!63 | |ontology_enrichment_uberon=UBERON:0000970!5.33e-12!9;UBERON:0000019!5.33e-12!9;UBERON:0000047!5.33e-12!9;UBERON:0004088!5.33e-12!9;UBERON:0002104!5.33e-12!9;UBERON:0001456!5.33e-12!9;UBERON:0003072!5.33e-12!9;UBERON:0003071!5.33e-12!9;UBERON:0004128!5.33e-12!9;UBERON:0000020!7.31e-12!12;UBERON:0001032!7.31e-12!12;UBERON:0004456!7.31e-12!12;UBERON:0005085!7.01e-11!13;UBERON:0001444!1.04e-09!11;UBERON:0004121!1.52e-08!102;UBERON:0000924!1.52e-08!102;UBERON:0006601!1.52e-08!102;UBERON:0003056!2.23e-08!49;UBERON:0000033!2.49e-08!63 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0001954,2.46e-07,7;UBERON:0003022,2.46e-07,7;UBERON:0002421,2.46e-07,7;UBERON:0000349,2.46e-07,7;UBERON:0002600,2.46e-07,7;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4652075062614,15.1583466086786,4.6663175777828,1.95980990275508,5.75010257459886,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,3.89480143673926,1.92109152660777,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260240885925407,0.229902104433473,0.720248519221397,0.30140963567143,0.544291993210623,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.354680467284547,0,0,1.2178597964584,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4652075062614,15.1583466086786,4.6663175777828,1.95980990275508,5.75010257459886,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,3.89480143673926,1.92109152660777,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260240885925407,0.229902104433473,0.720248519221397,0.30140963567143,0.544291993210623,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.354680467284547,0,0,1.2178597964584,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p14@Slc3a2 | |short_description=p14@Slc3a2 | ||
}} | }} |
Latest revision as of 04:26, 26 September 2015
Short description: | p14@Slc3a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Slc3a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:310 |
Association with transcript: | -429bp_to_ENSMUST00000010239, NM_008577, uc012bib.1_5end |
EntrezGene: | Slc3a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 9.18e-67 | 8 |
migratory neural crest cell | 1.74e-53 | 10 |
neuron associated cell | 1.74e-53 | 10 |
glial cell (sensu Vertebrata) | 1.74e-53 | 10 |
neuron associated cell (sensu Vertebrata) | 1.74e-53 | 10 |
glial cell | 1.74e-53 | 10 |
glioblast | 1.74e-53 | 10 |
glioblast (sensu Vertebrata) | 1.74e-53 | 10 |
oligodendrocyte | 4.13e-46 | 6 |
macroglial cell | 4.13e-46 | 6 |
astrocyte | 4.13e-46 | 6 |
astrocyte of the cerebral cortex | 3.06e-23 | 2 |
astrocyte of the hippocampus | 3.06e-23 | 2 |
central nervous system macrophage | 1.80e-22 | 2 |
microglial cell | 1.80e-22 | 2 |
neural cell | 1.52e-12 | 43 |
ectodermal cell | 2.93e-12 | 44 |
neurectodermal cell | 2.93e-12 | 44 |
monopoietic cell | 9.19e-12 | 4 |
myeloid leukocyte | 9.19e-12 | 4 |
phagocyte | 9.19e-12 | 4 |
monocyte | 9.19e-12 | 4 |
macrophage | 9.19e-12 | 4 |
tissue-resident macrophage | 9.19e-12 | 4 |
macrophage dendritic cell progenitor | 9.19e-12 | 4 |
monoblast | 9.19e-12 | 4 |
promonocyte | 9.19e-12 | 4 |
motile cell | 5.55e-10 | 54 |
embryonic cell | 1.12e-07 | 70 |
defensive cell | 4.05e-07 | 7 |
granulocyte monocyte progenitor cell | 4.05e-07 | 7 |
astrocyte of the cerebellum | 6.68e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.46e-09 | 73 |
nervous system | 2.65e-09 | 75 |
Ammon's horn | 2.46e-07 | 7 |
lobe parts of cerebral cortex | 2.46e-07 | 7 |
hippocampal formation | 2.46e-07 | 7 |
limbic system | 2.46e-07 | 7 |
limbic lobe | 2.46e-07 | 7 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |