FFCP PHASE1:Mm9::chr5:68238639..68238678,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11980 | |EntrezGene=11980 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3526 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BR88,E9Q4J5,Q3U9N5,P70704,A1L332 | |UniProt=Q8BR88,E9Q4J5,Q3U9N5,P70704,A1L332 | ||
|association_with_transcript=0bp_to_ENSMUST00000037380,ENSMUST00000113651,ENSMUST00000113652,ENSMUST00000143013,NM_001038999,NM_009727,uc008xqa.1,uc008xqb.1,uc008xqc.1,uc008xqe.1_5end | |association_with_transcript=0bp_to_ENSMUST00000037380,ENSMUST00000113651,ENSMUST00000113652,ENSMUST00000143013,NM_001038999,NM_009727,uc008xqa.1,uc008xqb.1,uc008xqc.1,uc008xqe.1_5end | ||
|cluster_id=chr5:68238639..68238678,- | |||
|description=CAGE_peak_1_at_Atp8a1_5end | |description=CAGE_peak_1_at_Atp8a1_5end | ||
|id=chr5:68238639..68238678,- | |id=chr5:68238639..68238678,- | ||
|ontology_enrichment_celltype=CL:0000540!2.56e-09!33;CL:0000047!2.56e-09!33;CL:0000031!2.56e-09!33;CL:0000404!2.56e-09!33;CL:0000117!3.51e-08!23;CL:0000337!3.51e-08!23 | |ontology_enrichment_celltype=CL:0000540!2.56e-09!33;CL:0000047!2.56e-09!33;CL:0000031!2.56e-09!33;CL:0000404!2.56e-09!33;CL:0000117!3.51e-08!23;CL:0000337!3.51e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.55e-09,33;CL:0000047,2.55e-09,33;CL:0000031,2.55e-09,33;CL:0000404,2.55e-09,33;CL:0000117,3.50e-08,23;CL:0000337,3.50e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.29e-14!73;UBERON:0005743!8.29e-14!73;UBERON:0000073!3.69e-13!75;UBERON:0001016!3.69e-13!75;UBERON:0001049!6.66e-11!52;UBERON:0005068!6.66e-11!52;UBERON:0006241!6.66e-11!52;UBERON:0007135!6.66e-11!52;UBERON:0002020!9.56e-11!34;UBERON:0000955!4.44e-10!50;UBERON:0006238!4.44e-10!50;UBERON:0002616!9.65e-10!49;UBERON:0002791!2.04e-08!29;UBERON:0003528!2.04e-08!29;UBERON:0001893!2.04e-08!29;UBERON:0003080!4.33e-08!40;UBERON:0002780!1.16e-07!39;UBERON:0001890!1.16e-07!39;UBERON:0006240!1.16e-07!39;UBERON:0000033!1.50e-07!63;UBERON:0004121!1.68e-07!102;UBERON:0000924!1.68e-07!102;UBERON:0006601!1.68e-07!102;UBERON:0002048!1.81e-07!14;UBERON:0000117!1.81e-07!14;UBERON:0000171!1.81e-07!14;UBERON:0000170!1.81e-07!14;UBERON:0005597!1.81e-07!14;UBERON:0000118!1.81e-07!14;UBERON:0002021!2.41e-07!10;UBERON:0000411!2.41e-07!10;UBERON:0001950!2.41e-07!10;UBERON:0007811!3.81e-07!86;UBERON:0002346!5.52e-07!71;UBERON:0003075!5.52e-07!71;UBERON:0007284!5.52e-07!71 | |ontology_enrichment_uberon=UBERON:0001017!8.29e-14!73;UBERON:0005743!8.29e-14!73;UBERON:0000073!3.69e-13!75;UBERON:0001016!3.69e-13!75;UBERON:0001049!6.66e-11!52;UBERON:0005068!6.66e-11!52;UBERON:0006241!6.66e-11!52;UBERON:0007135!6.66e-11!52;UBERON:0002020!9.56e-11!34;UBERON:0000955!4.44e-10!50;UBERON:0006238!4.44e-10!50;UBERON:0002616!9.65e-10!49;UBERON:0002791!2.04e-08!29;UBERON:0003528!2.04e-08!29;UBERON:0001893!2.04e-08!29;UBERON:0003080!4.33e-08!40;UBERON:0002780!1.16e-07!39;UBERON:0001890!1.16e-07!39;UBERON:0006240!1.16e-07!39;UBERON:0000033!1.50e-07!63;UBERON:0004121!1.68e-07!102;UBERON:0000924!1.68e-07!102;UBERON:0006601!1.68e-07!102;UBERON:0002048!1.81e-07!14;UBERON:0000117!1.81e-07!14;UBERON:0000171!1.81e-07!14;UBERON:0000170!1.81e-07!14;UBERON:0005597!1.81e-07!14;UBERON:0000118!1.81e-07!14;UBERON:0002021!2.41e-07!10;UBERON:0000411!2.41e-07!10;UBERON:0001950!2.41e-07!10;UBERON:0007811!3.81e-07!86;UBERON:0002346!5.52e-07!71;UBERON:0003075!5.52e-07!71;UBERON:0007284!5.52e-07!71 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.06e-13,73;UBERON:0001016,4.67e-13,75;UBERON:0000073,7.03e-12,54;UBERON:0001049,8.53e-11,52;UBERON:0005068,8.53e-11,52;UBERON:0006241,8.53e-11,52;UBERON:0007135,8.53e-11,52;UBERON:0002020,1.02e-10,34;UBERON:0011216,3.45e-10,194;UBERON:0004121,4.38e-09,95;UBERON:0000924,4.38e-09,95;UBERON:0006601,4.38e-09,95;UBERON:0002346,6.36e-09,64;UBERON:0003075,6.36e-09,64;UBERON:0007284,6.36e-09,64;UBERON:0000955,1.89e-08,47;UBERON:0006238,1.89e-08,47;UBERON:0003528,2.17e-08,29;UBERON:0002791,2.17e-08,29;UBERON:0001893,2.17e-08,29;UBERON:0002616,3.95e-08,46;UBERON:0003080,4.57e-08,40;UBERON:0010371,8.87e-08,73;UBERON:0002780,1.22e-07,39;UBERON:0001890,1.22e-07,39;UBERON:0006240,1.22e-07,39;UBERON:0002048,1.81e-07,14;UBERON:0000117,1.81e-07,14;UBERON:0000171,1.81e-07,14;UBERON:0000170,1.81e-07,14;UBERON:0005597,1.81e-07,14;UBERON:0000118,1.81e-07,14;UBERON:0002021,2.40e-07,10;UBERON:0000411,2.40e-07,10;UBERON:0001950,2.40e-07,10 | |||
|phase1_expression=9.60893082628764,11.8651638597383,15.0149748998547,25.1045295384669,41.0734498556005,14.4376173844225,9.81173090501208,16.5277854005218,14.782815825925,10.7669682108117,2.91070545983358,3.43020283679947,14.8944635040149,15.7356724354195,19.6534759471241,15.9955461237963,10.4934281719222,20.3473096656063,25.3661702170617,22.9170411970936,31.0408009051405,6.25532992565577,5.74639536105658,3.03985603307473,2.2940928106717,14.9300310669905,12.0613358924541,7.97243560937789,2.09025761402011,6.30075324399827,3.76941868114018,10.7955214488137,15.9916844771988,0,9.24325183204079,3.49092755252834,5.51257261908397,29.7157457823205,18.7520482685712,24.0820922227947,35.2938892818609,31.4200923080885,29.1306211818692,0.251793635951155,0,0.550640256485045,0.782391344348039,0.872100625521786,0.659058548203415,2.13872888981712,2.09979632438044,2.87505128729943,15.7715649694272,18.859415692295,8.4023449785616,0.771778308107841,2.29226751951005,2.06268836910977,17.3992156339254,28.0365219014177,25.9870875437533,0.338844532069132,2.66788438833342,3.1496490104849,7.9109309005358,12.7886420690298,6.5912024314049,11.5265491596466,15.9682002955056,10.2604513132085,11.3575479129746,38.5628828945135,30.4798586513227,11.7591167246356,9.20116521775069,15.6267193723704,78.182275509566,43.7967569632194,51.1509755743291,17.672762555846,20.0357939489277,17.7110545989298,42.1566328492085,42.7699583624077,55.4657639429821,47.7298308467342,47.5521413869004,29.4511124403975,2.80186915332781,11.5624486963382,10.4351215932604,4.30211938490693,0.679971333707751,0,0,0,10.2524426696179,0,0,0,15.4927761754349,0,0,0,1.5154372870785,2.28023878927589,1.51657333504435,9.1347103775248,32.6261733395436,7.86743337043571,3.99016251562112,4.26251669636998,3.92046345335299,4.06951129492081,5.52666923537813,4.64966387919799,1.23597483867187,10.4111536982336,38.0382537338446,3.23533699894818,11.4837589599405,11.6370060752453,29.8226817948995,29.2780797011547,34.3492599174066,9.70736809792647,7.90779821739074,4.19931911695385,6.60765180779936,39.0953568846587,49.8675657072303,15.4554853098823,48.3231610134529,36.3115949409069,33.2460871295296,36.6665254533132,2.85150218780886,9.82815067819735,7.32895999457657,6.31325567659422,2.86264974517948,3.90833577536904,5.22180176435513,8.74087943447147,8.300452896462,10.6334387836425,10.6819965998091,10.0894314588216,2.37124792226126,1.51284864134255,2.11141348996739,3.06874025398605,5.00485048606076,7.66154766348766,10.0833246839892,9.55364480728767,2.1066395619397,4.63226232806487,7.10408748488982,2.89976081549703,3.51789089971644,1.44049649168812,3.07768156260773,3.93528463494808,3.23960937063494,3.95307706075693,3.75582761959467,3.97002164048376,3.29119699826961,5.58169377868924,6.72871119230603,9.35679919522127,8.56245449635098,9.5286557319864,40.5859600728766,12.2456488731348,10.9038198384653,15.3381328664856,4.90562976231038,5.80591679651096,7.86091514064769,11.4959609035305,12.6755484991576,11.6037631928661,11.3886974770683,8.23494773620054,10.304743560811,11.7384318504279,9.16331209459865,6.29173586057955,9.29393614461185,13.1433240347882,1.70701110857774,5.25543158004753,7.88954149711563,4.88763186828754,4.46090720485539,5.04977903210294,6.00747102680444,6.9376769550413,5.02395929092399,3.33172342588861,3.55743152504579,9.00963570866908,11.9900987019054,13.0420025183215,11.1573066763677,11.576503668116,12.4766667372896,13.8094145976389,6.48540907100142,5.21666685057355,2.87536413054709,7.07067800570156,5.61667811606209,2.77836765741823,2.87035861635059,2.41221760681684,67.8044207911439,4.73728529426212,14.5038829033403,21.8971160649993,36.6116787330063,64.3224028576573,64.9859139618817,57.5644261180507,38.1477048736982,39.1992500678332,42.5744232315491,56.8605702063611,61.130483580527,85.0536464459288,3.01582567878545,14.1415477792864,4.42587845717133,3.86311444826625,41.7431533968259,37.6249513960972,0,19.1877904675323,12.6203287766503,13.6653560503823,21.1114929778143,10.9925647058174,15.5959071857676,29.1568826712497,14.5731852602962,18.1198631905013,21.7408277870588,24.4204200480573,13.0584878391607,3.20518086601059,3.58351310577867,14.6823409445557,3.98235415019888,3.39892890616974,2.11626489875326,1.13163047853539,0.295301892880773,3.07435147943927,3.6179961043551,1.45413491791002,2.85197902707777,0.632073515871632,2.10837217149998,2.06271086496374,26.5542892487955,4.68158844481407,2.19909762430683,5.5727629108214,12.2364761213169,11.7723419617367,11.3538824215463,10.0473433207818,16.6616912725234,2.54198485036584,14.7754026696824,9.72828892354732,10.333723308538,9.40881628879231,9.07229814423837,8.042904087508,8.74442509889552,52.6607857709848,23.7510524309015,4.54051109519089,7.22258656741876,14.3160027323565,17.6335553760122,19.4461447225544,7.30907248973578,6.85762116385924,8.153798454461,1.90934123603023,3.95419991976419,3.45643094115643,3.88819226958485,3.13632444021703,6.98760203987768,4.45052343069908,3.88471241909079,10.2084817373772,37.7179572279117,4.97071450469541,0,8.67195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|phase1_expression=9.60893082628764,11.8651638597383,15.0149748998547,25.1045295384669,41.0734498556005,14.4376173844225,9.81173090501208,16.5277854005218,14.782815825925,10.7669682108117,2.91070545983358,3.43020283679947,14.8944635040149,15.7356724354195,19.6534759471241,15.9955461237963,10.4934281719222,20.3473096656063,25.3661702170617,22.9170411970936,31.0408009051405,6.25532992565577,5.74639536105658,3.03985603307473,2.2940928106717,14.9300310669905,12.0613358924541,7.97243560937789,2.09025761402011,6.30075324399827,3.76941868114018,10.7955214488137,15.9916844771988,0,9.24325183204079,3.49092755252834,5.51257261908397,29.7157457823205,18.7520482685712,24.0820922227947,35.2938892818609,31.4200923080885,29.1306211818692,0.251793635951155,0,0.550640256485045,0.782391344348039,0.872100625521786,0.659058548203415,2.13872888981712,2.09979632438044,2.87505128729943,15.7715649694272,18.859415692295,8.4023449785616,0.771778308107841,2.29226751951005,2.06268836910977,17.3992156339254,28.0365219014177,25.9870875437533,0.338844532069132,2.66788438833342,3.1496490104849,7.9109309005358,12.7886420690298,6.5912024314049,11.5265491596466,15.9682002955056,10.2604513132085,11.3575479129746,38.5628828945135,30.4798586513227,11.7591167246356,9.20116521775069,15.6267193723704,78.182275509566,43.7967569632194,51.1509755743291,17.672762555846,20.0357939489277,17.7110545989298,42.1566328492085,42.7699583624077,55.4657639429821,47.7298308467342,47.5521413869004,29.4511124403975,2.80186915332781,11.5624486963382,10.4351215932604,4.30211938490693,0.679971333707751,0,0,0,10.2524426696179,0,0,0,15.4927761754349,0,0,0,1.5154372870785,2.28023878927589,1.51657333504435,9.1347103775248,32.6261733395436,7.86743337043571,3.99016251562112,4.26251669636998,3.92046345335299,4.06951129492081,5.52666923537813,4.64966387919799,1.23597483867187,10.4111536982336,38.0382537338446,3.23533699894818,11.4837589599405,11.6370060752453,29.8226817948995,29.2780797011547,34.3492599174066,9.70736809792647,7.90779821739074,4.19931911695385,6.60765180779936,39.0953568846587,49.8675657072303,15.4554853098823,48.3231610134529,36.3115949409069,33.2460871295296,36.6665254533132,2.85150218780886,9.82815067819735,7.32895999457657,6.31325567659422,2.86264974517948,3.90833577536904,5.22180176435513,8.74087943447147,8.300452896462,10.6334387836425,10.6819965998091,10.0894314588216,2.37124792226126,1.51284864134255,2.11141348996739,3.06874025398605,5.00485048606076,7.66154766348766,10.0833246839892,9.55364480728767,2.1066395619397,4.63226232806487,7.10408748488982,2.89976081549703,3.51789089971644,1.44049649168812,3.07768156260773,3.93528463494808,3.23960937063494,3.95307706075693,3.75582761959467,3.97002164048376,3.29119699826961,5.58169377868924,6.72871119230603,9.35679919522127,8.56245449635098,9.5286557319864,40.5859600728766,12.2456488731348,10.9038198384653,15.3381328664856,4.90562976231038,5.80591679651096,7.86091514064769,11.4959609035305,12.6755484991576,11.6037631928661,11.3886974770683,8.23494773620054,10.304743560811,11.7384318504279,9.16331209459865,6.29173586057955,9.29393614461185,13.1433240347882,1.70701110857774,5.25543158004753,7.88954149711563,4.88763186828754,4.46090720485539,5.04977903210294,6.00747102680444,6.9376769550413,5.02395929092399,3.33172342588861,3.55743152504579,9.00963570866908,11.9900987019054,13.0420025183215,11.1573066763677,11.576503668116,12.4766667372896,13.8094145976389,6.48540907100142,5.21666685057355,2.87536413054709,7.07067800570156,5.61667811606209,2.77836765741823,2.87035861635059,2.41221760681684,67.8044207911439,4.73728529426212,14.5038829033403,21.8971160649993,36.6116787330063,64.3224028576573,64.9859139618817,57.5644261180507,38.1477048736982,39.1992500678332,42.5744232315491,56.8605702063611,61.130483580527,85.0536464459288,3.01582567878545,14.1415477792864,4.42587845717133,3.86311444826625,41.7431533968259,37.6249513960972,0,19.1877904675323,12.6203287766503,13.6653560503823,21.1114929778143,10.9925647058174,15.5959071857676,29.1568826712497,14.5731852602962,18.1198631905013,21.7408277870588,24.4204200480573,13.0584878391607,3.20518086601059,3.58351310577867,14.6823409445557,3.98235415019888,3.39892890616974,2.11626489875326,1.13163047853539,0.295301892880773,3.07435147943927,3.6179961043551,1.45413491791002,2.85197902707777,0.632073515871632,2.10837217149998,2.06271086496374,26.5542892487955,4.68158844481407,2.19909762430683,5.5727629108214,12.2364761213169,11.7723419617367,11.3538824215463,10.0473433207818,16.6616912725234,2.54198485036584,14.7754026696824,9.72828892354732,10.333723308538,9.40881628879231,9.07229814423837,8.042904087508,8.74442509889552,52.6607857709848,23.7510524309015,4.54051109519089,7.22258656741876,14.3160027323565,17.6335553760122,19.4461447225544,7.30907248973578,6.85762116385924,8.153798454461,1.90934123603023,3.95419991976419,3.45643094115643,3.88819226958485,3.13632444021703,6.98760203987768,4.45052343069908,3.88471241909079,10.2084817373772,37.7179572279117,4.97071450469541,0,8.67195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| ||
|short_description=p1@Atp8a1 | |short_description=p1@Atp8a1 | ||
}} | }} |
Latest revision as of 04:34, 26 September 2015
Short description: | p1@Atp8a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Atp8a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3526 |
Association with transcript: | 0bp_to_ENSMUST00000037380, ENSMUST00000113651, ENSMUST00000113652, ENSMUST00000143013, NM_001038999, NM_009727, uc008xqa.1, uc008xqb.1, uc008xqc.1, uc008xqe.1_5end |
EntrezGene: | Atp8a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.55e-09 | 33 |
neuronal stem cell | 2.55e-09 | 33 |
neuroblast | 2.55e-09 | 33 |
electrically signaling cell | 2.55e-09 | 33 |
CNS neuron (sensu Vertebrata) | 3.50e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.50e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.06e-13 | 73 |
nervous system | 4.67e-13 | 75 |
regional part of nervous system | 7.03e-12 | 54 |
neural tube | 8.53e-11 | 52 |
neural rod | 8.53e-11 | 52 |
future spinal cord | 8.53e-11 | 52 |
neural keel | 8.53e-11 | 52 |
gray matter | 1.02e-10 | 34 |
organ system subdivision | 3.45e-10 | 194 |
ectoderm-derived structure | 4.38e-09 | 95 |
ectoderm | 4.38e-09 | 95 |
presumptive ectoderm | 4.38e-09 | 95 |
neurectoderm | 6.36e-09 | 64 |
neural plate | 6.36e-09 | 64 |
presumptive neural plate | 6.36e-09 | 64 |
brain | 1.89e-08 | 47 |
future brain | 1.89e-08 | 47 |
brain grey matter | 2.17e-08 | 29 |
regional part of telencephalon | 2.17e-08 | 29 |
telencephalon | 2.17e-08 | 29 |
regional part of brain | 3.95e-08 | 46 |
anterior neural tube | 4.57e-08 | 40 |
ecto-epithelium | 8.87e-08 | 73 |
regional part of forebrain | 1.22e-07 | 39 |
forebrain | 1.22e-07 | 39 |
future forebrain | 1.22e-07 | 39 |
lung | 1.81e-07 | 14 |
respiratory tube | 1.81e-07 | 14 |
respiration organ | 1.81e-07 | 14 |
pair of lungs | 1.81e-07 | 14 |
lung primordium | 1.81e-07 | 14 |
lung bud | 1.81e-07 | 14 |
occipital lobe | 2.40e-07 | 10 |
visual cortex | 2.40e-07 | 10 |
neocortex | 2.40e-07 | 10 |