Personal tools

FFCP PHASE1:Mm9::chr5:75440488..75440525,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:75440488..75440525,-
|DHSsupport=NA
|short_description=p2@Chic2
|DPIdataset=NA
|description=CAGE_peak_2_at_Chic2_5end
|association_with_transcript=125bp_to_NM_028850,uc008xtw.1_5end
|EntrezGene=74277
|EntrezGene=74277
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q9D9G3
|UniProt=Q9D9G3
|association_with_transcript=125bp_to_NM_028850,uc008xtw.1_5end
|cluster_id=chr5:75440488..75440525,-
|description=CAGE_peak_2_at_Chic2_5end
|id=chr5:75440488..75440525,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!3.54e-13!130;UBERON:0000925!3.54e-13!130;UBERON:0006595!3.54e-13!130;UBERON:0001007!1.92e-12!128;UBERON:0001555!1.92e-12!128;UBERON:0007026!1.92e-12!128;UBERON:0004921!5.84e-12!126;UBERON:0004185!5.84e-12!126;UBERON:0000077!1.26e-10!97;UBERON:0005911!1.06e-09!69;UBERON:0003104!1.90e-09!131;UBERON:0009142!1.90e-09!131;UBERON:0001041!2.92e-09!92;UBERON:0000490!1.42e-08!66;UBERON:0000926!3.57e-08!193;UBERON:0004120!3.57e-08!193;UBERON:0006603!3.57e-08!193;UBERON:0003929!5.86e-07!55
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.63e-11,118;UBERON:0000925,5.63e-11,118;UBERON:0006595,5.63e-11,118;UBERON:0001007,2.64e-10,116;UBERON:0001555,2.64e-10,116;UBERON:0007026,2.64e-10,116;UBERON:0004921,7.26e-10,114;UBERON:0005911,1.06e-09,69;UBERON:0000490,1.42e-08,66;UBERON:0001041,1.91e-07,80;UBERON:0002100,5.17e-07,90;UBERON:0003929,5.86e-07,55
|phase1_expression=9.28863313207805,17.7977457896074,21.8399634906977,17.5429242557961,21.5385163876929,14.1018588405987,11.6806320297763,30.9895976259783,21.3998857670533,17.7889040004715,15.923271044972,11.3276465773378,29.6177262780986,24.9148146894143,3.66420737997229,4.25198061518635,5.59649502502517,19.5586542522107,19.7444784392264,16.1268067683251,6.80346321208558,8.04256704727171,5.48519557191764,11.1994695955385,17.2056960800378,19.5238867799107,20.2458138194765,16.1603424514417,14.251756459228,10.837295579677,12.4169085966971,2.54012269383853,3.07532393792285,15.8481681015439,12.7094712690561,8.31173226792462,11.0251452381679,35.5751886126372,35.9414258480948,23.5585684788209,36.4703522579229,28.6879103682547,29.6161315349004,6.29484089877886,7.80602370390262,7.70896359079063,17.9950009200049,5.45062890951116,2.85592037554813,6.41618666945135,4.33957907038624,8.62515386189829,28.3552604237574,34.8173828165445,34.9537551108163,11.5766746216176,10.3152038377952,14.9544906760458,3.23706337375356,1.5869729378161,2.53532561402472,3.72728985276045,0.889294796111139,6.74924787961049,10.8775299882367,7.8152812644071,6.5912024314049,14.6002956022191,2.38486108309499,3.24014251996058,3.15487442027073,4.28476476605705,4.41737081903227,4.65465037016825,3.83381884072945,3.67687514644008,2.20231761998777,1.78762273319263,1.22885226604995,4.3522474950964,4.20843160571084,3.12548022334056,1.3959149950069,3.93933827022176,2.75036845998258,2.65165726926301,3.55929201997757,3.91438836233131,4.46784540665786,4.1564358058732,25.7979394944493,21.5105969245347,33.9985666853875,14.0322829825832,10.3964226791627,19.2651561451854,6.03911006566533,3.40860645156115,4.1565760736459,2.82671659608272,7.60554466794075,2.56652954828636,2.54805239706646,7.11066703153331,22.9480503471887,16.2150313904063,23.25412447068,16.2141109201065,13.4647699496529,5.78924342352817,2.94925055502431,3.95805121805784,4.84292544237723,6.78251882486802,11.7588707135705,4.14699751387929,27.1914464507811,10.8449517689934,6.19227386364912,6.95597454773859,9.27534377533653,5.33362778448744,3.72783522436244,5.5628351432194,6.0739544975902,11.240110429178,17.4930081778644,15.5974710058286,17.7898317902291,2.69623150928681,2.74500361691176,4.90051973240171,4.17178368461463,3.58001640262463,3.94797284663164,3.56930778749067,11.2023300235348,9.82815067819735,15.4160882644542,10.7325346502102,3.90361328888111,6.43725892413724,3.96136685571768,3.61691562805716,7.75616090325138,3.33095672740609,4.8724896771059,8.79591460512653,3.44908788692548,2.83659120251729,2.28736461413134,4.82230611340665,5.00485048606076,8.70630416305416,6.99659263787008,4.17971960318836,14.0442637462647,11.8380037272769,13.924011470384,3.72826390563903,4.92504725960302,5.40186184383045,4.26140524053378,4.72234156193769,3.85667782218446,7.44108623201305,4.82892122519315,13.5447797145917,4.77223564749093,9.19337798842933,14.3491792896165,11.5497990066013,6.36695334344047,16.3731830887654,5.46753866266731,5.35103984372279,19.1642894130603,5.55346189993443,4.69234151177515,3.48355007790658,3.09281907173024,3.22693639397348,5.55945109612176,5.32631753115166,14.2358718463353,9.38784041926862,11.0587491872119,8.75408476981064,9.55324026883689,6.29173586057955,13.6166971421057,18.5201384126561,5.69003702859245,3.42745537829186,4.50830942692322,3.66572390121566,6.20647958936402,9.46833568519301,8.66340558602325,5.16635517928608,5.96595165797224,10.2419646055094,14.2297261001831,3.33690211432188,3.73462090715086,3.14806957338795,3.85434230638156,5.54707467430559,8.65727896056827,9.49397253587675,47.0192157647603,9.06052663520669,21.5652309791032,20.0956111740992,19.0342980599882,17.1753637004036,16.5045620440159,28.4641677604387,25.8654466233247,5.49525094134406,5.21487924614483,5.7713329163564,8.44884893838608,11.3904255060435,15.2347930167049,26.9284434043762,19.3891227250615,17.4957104822532,19.1345722388985,21.1383675983302,19.6860879327121,28.4958645405578,9.04747703635634,4.35124547054968,3.44234991113325,4.41498794087572,2.72936002979246,2.81308047821288,6.22952792431367,11.6136626514012,4.10160685241134,3.12350995437311,4.73931475012158,3.10659437338318,2.45078541490634,5.37845408498782,7.2865926301481,3.79932615284705,4.34816555741176,6.74774764485795,12.0649072427028,4.09550888434687,11.2392001953967,8.74341651754438,23.8941249011933,2.18502572539483,4.53485335447127,10.9390946258421,8.85905678642318,13.8345816574767,20.6742634534577,10.9060118843252,13.9033977570041,21.4904995396355,25.3004660579997,39.191506434311,7.48967132658334,3.78128297465751,4.65691261617916,7.07312215604255,5.49754724291048,5.52943334566419,9.87294123612726,16.4411072521884,15.9576761483323,21.183207086382,22.0528398054962,18.4672603294458,22.282090884035,10.9769523369244,13.966564248367,17.7272171724666,13.9910801582328,2.41052892613663,6.1513517087227,4.54051109519089,6.11141940320049,3.95573759709851,5.19438065339896,5.71945433016307,39.0950388985867,34.1481543669725,38.143192770021,18.1387417422872,3.32152793260192,5.28630614529807,3.45617090629764,6.27264888043406,10.0446779323242,11.7331981354794,18.8449879053766,18.3229159388821,10.628427809927,21.7468759580424,2.81846469342095,4.78452947340732,3.64008679005615,6.02798683866548,5.16639293910924,6.58928889414035,12.5572245350957,5.33837977860195,5.24296722128554,5.07326653734613,3.45636007509439,18.3286449964343,3.85177909051312,2.87590680061516,5.84643703400078,6.26593434836185,9.13934231993819,12.9811085481566,10.7813354837441,13.1256384932592,11.507227804905,11.998316031284,18.3220815790735,13.5658696712865,18.3496736425063,12.2434407152214,1.33191572024439,2.24284641523689,3.52557694364565,11.9777548299958,12.5747258552292,9.52388446189778,10.9327873330324,15.0471631210609,3.95326289831947,2.76195141904306,2.29158205375759,4.64003592327956,0.685082519770642,3.0215755895588,1.35004500046361,1.35096360967266,4.98456649882625,1.03552062350364,3.00983307994112,0.798049746802062,4.09760653809922,5.34834777550247,2.72497111416377,6.43452279575049,8.88986911206461,6.38708677440572,5.77654577265267,6.57012750585873,4.81610669791456,6.60192194851267,5.43120743325318,7.74704344098918,5.97328877138378,8.57328644309533,6.02598494913249,7.33055037762079,4.94503080963968,5.2991611248383,7.20025430009372,5.85670160325814,6.43777712857767,5.95920308192547,7.34053167239579,7.10762706290083,7.13419094203813,6.57674278594607,6.92600980613895,6.73370725989286,7.47400614182297,5.71325997778268,8.18462086339379,7.7468420592983,7.13754460630223,3.49734809113124,7.01794825336225,13.9666185131394,20.2765631992974,10.8089795368563,8.34724208233517
|phase1_expression=9.28863313207805,17.7977457896074,21.8399634906977,17.5429242557961,21.5385163876929,14.1018588405987,11.6806320297763,30.9895976259783,21.3998857670533,17.7889040004715,15.923271044972,11.3276465773378,29.6177262780986,24.9148146894143,3.66420737997229,4.25198061518635,5.59649502502517,19.5586542522107,19.7444784392264,16.1268067683251,6.80346321208558,8.04256704727171,5.48519557191764,11.1994695955385,17.2056960800378,19.5238867799107,20.2458138194765,16.1603424514417,14.251756459228,10.837295579677,12.4169085966971,2.54012269383853,3.07532393792285,15.8481681015439,12.7094712690561,8.31173226792462,11.0251452381679,35.5751886126372,35.9414258480948,23.5585684788209,36.4703522579229,28.6879103682547,29.6161315349004,6.29484089877886,7.80602370390262,7.70896359079063,17.9950009200049,5.45062890951116,2.85592037554813,6.41618666945135,4.33957907038624,8.62515386189829,28.3552604237574,34.8173828165445,34.9537551108163,11.5766746216176,10.3152038377952,14.9544906760458,3.23706337375356,1.5869729378161,2.53532561402472,3.72728985276045,0.889294796111139,6.74924787961049,10.8775299882367,7.8152812644071,6.5912024314049,14.6002956022191,2.38486108309499,3.24014251996058,3.15487442027073,4.28476476605705,4.41737081903227,4.65465037016825,3.83381884072945,3.67687514644008,2.20231761998777,1.78762273319263,1.22885226604995,4.3522474950964,4.20843160571084,3.12548022334056,1.3959149950069,3.93933827022176,2.75036845998258,2.65165726926301,3.55929201997757,3.91438836233131,4.46784540665786,4.1564358058732,25.7979394944493,21.5105969245347,33.9985666853875,14.0322829825832,10.3964226791627,19.2651561451854,6.03911006566533,3.40860645156115,4.1565760736459,2.82671659608272,7.60554466794075,2.56652954828636,2.54805239706646,7.11066703153331,22.9480503471887,16.2150313904063,23.25412447068,16.2141109201065,13.4647699496529,5.78924342352817,2.94925055502431,3.95805121805784,4.84292544237723,6.78251882486802,11.7588707135705,4.14699751387929,27.1914464507811,10.8449517689934,6.19227386364912,6.95597454773859,9.27534377533653,5.33362778448744,3.72783522436244,5.5628351432194,6.0739544975902,11.240110429178,17.4930081778644,15.5974710058286,17.7898317902291,2.69623150928681,2.74500361691176,4.90051973240171,4.17178368461463,3.58001640262463,3.94797284663164,3.56930778749067,11.2023300235348,9.82815067819735,15.4160882644542,10.7325346502102,3.90361328888111,6.43725892413724,3.96136685571768,3.61691562805716,7.75616090325138,3.33095672740609,4.8724896771059,8.79591460512653,3.44908788692548,2.83659120251729,2.28736461413134,4.82230611340665,5.00485048606076,8.70630416305416,6.99659263787008,4.17971960318836,14.0442637462647,11.8380037272769,13.924011470384,3.72826390563903,4.92504725960302,5.40186184383045,4.26140524053378,4.72234156193769,3.85667782218446,7.44108623201305,4.82892122519315,13.5447797145917,4.77223564749093,9.19337798842933,14.3491792896165,11.5497990066013,6.36695334344047,16.3731830887654,5.46753866266731,5.35103984372279,19.1642894130603,5.55346189993443,4.69234151177515,3.48355007790658,3.09281907173024,3.22693639397348,5.55945109612176,5.32631753115166,14.2358718463353,9.38784041926862,11.0587491872119,8.75408476981064,9.55324026883689,6.29173586057955,13.6166971421057,18.5201384126561,5.69003702859245,3.42745537829186,4.50830942692322,3.66572390121566,6.20647958936402,9.46833568519301,8.66340558602325,5.16635517928608,5.96595165797224,10.2419646055094,14.2297261001831,3.33690211432188,3.73462090715086,3.14806957338795,3.85434230638156,5.54707467430559,8.65727896056827,9.49397253587675,47.0192157647603,9.06052663520669,21.5652309791032,20.0956111740992,19.0342980599882,17.1753637004036,16.5045620440159,28.4641677604387,25.8654466233247,5.49525094134406,5.21487924614483,5.7713329163564,8.44884893838608,11.3904255060435,15.2347930167049,26.9284434043762,19.3891227250615,17.4957104822532,19.1345722388985,21.1383675983302,19.6860879327121,28.4958645405578,9.04747703635634,4.35124547054968,3.44234991113325,4.41498794087572,2.72936002979246,2.81308047821288,6.22952792431367,11.6136626514012,4.10160685241134,3.12350995437311,4.73931475012158,3.10659437338318,2.45078541490634,5.37845408498782,7.2865926301481,3.79932615284705,4.34816555741176,6.74774764485795,12.0649072427028,4.09550888434687,11.2392001953967,8.74341651754438,23.8941249011933,2.18502572539483,4.53485335447127,10.9390946258421,8.85905678642318,13.8345816574767,20.6742634534577,10.9060118843252,13.9033977570041,21.4904995396355,25.3004660579997,39.191506434311,7.48967132658334,3.78128297465751,4.65691261617916,7.07312215604255,5.49754724291048,5.52943334566419,9.87294123612726,16.4411072521884,15.9576761483323,21.183207086382,22.0528398054962,18.4672603294458,22.282090884035,10.9769523369244,13.966564248367,17.7272171724666,13.9910801582328,2.41052892613663,6.1513517087227,4.54051109519089,6.11141940320049,3.95573759709851,5.19438065339896,5.71945433016307,39.0950388985867,34.1481543669725,38.143192770021,18.1387417422872,3.32152793260192,5.28630614529807,3.45617090629764,6.27264888043406,10.0446779323242,11.7331981354794,18.8449879053766,18.3229159388821,10.628427809927,21.7468759580424,2.81846469342095,4.78452947340732,3.64008679005615,6.02798683866548,5.16639293910924,6.58928889414035,12.5572245350957,5.33837977860195,5.24296722128554,5.07326653734613,3.45636007509439,18.3286449964343,3.85177909051312,2.87590680061516,5.84643703400078,6.26593434836185,9.13934231993819,12.9811085481566,10.7813354837441,13.1256384932592,11.507227804905,11.998316031284,18.3220815790735,13.5658696712865,18.3496736425063,12.2434407152214,1.33191572024439,2.24284641523689,3.52557694364565,11.9777548299958,12.5747258552292,9.52388446189778,10.9327873330324,15.0471631210609,3.95326289831947,2.76195141904306,2.29158205375759,4.64003592327956,0.685082519770642,3.0215755895588,1.35004500046361,1.35096360967266,4.98456649882625,1.03552062350364,3.00983307994112,0.798049746802062,4.09760653809922,5.34834777550247,2.72497111416377,6.43452279575049,8.88986911206461,6.38708677440572,5.77654577265267,6.57012750585873,4.81610669791456,6.60192194851267,5.43120743325318,7.74704344098918,5.97328877138378,8.57328644309533,6.02598494913249,7.33055037762079,4.94503080963968,5.2991611248383,7.20025430009372,5.85670160325814,6.43777712857767,5.95920308192547,7.34053167239579,7.10762706290083,7.13419094203813,6.57674278594607,6.92600980613895,6.73370725989286,7.47400614182297,5.71325997778268,8.18462086339379,7.7468420592983,7.13754460630223,3.49734809113124,7.01794825336225,13.9666185131394,20.2765631992974,10.8089795368563,8.34724208233517
|short_description=p2@Chic2
}}
}}

Latest revision as of 05:24, 26 September 2015

Short description:p2@Chic2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Chic2_5end
Coexpression cluster:NA
Association with transcript: 125bp_to_NM_028850, uc008xtw.1_5end
EntrezGene:Chic2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Chic2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I517.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I621.84
CD326+ enterocyte, pool1.CNhs13542.11848-124I317.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I421.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I714.10
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I811.68
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E930.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E721.40
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F217.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E615.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.33
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E429.62
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E824.91
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A219.56
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A419.74
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A616.13
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.80
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.49
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D217.21
GP2+ M cell, pool1.CNhs13228.11845-124H919.52
GP2+ M cell, pool2.CNhs13231.11846-124I120.25
GP2+ M cell, pool3.CNhs13240.11847-124I216.16
Ileum epithelium, pool1.CNhs13199.10252-104B914.25
Ileum epithelium, pool2.CNhs13232.10253-104C110.84
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C812.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F512.71
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.31
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G835.58
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H135.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H323.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G936.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H228.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H429.62
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.29
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.71
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B718.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.45
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.42
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A228.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I934.82
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A134.95
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.58
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.32
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C514.95
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C86.59
Mouse Microglia, donor2.CNhs12634.11736-123E814.60
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.65
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.83
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.35
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D94.47
Mouse Schwann, donor2.CNhs12573.11746-123F94.16
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G325.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F721.51
Mouse hepatocyte, donor1.CNhs13078.11714-123C434.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C814.03
Mouse hepatocyte, donor6.CNhs13090.11822-124F410.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F619.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.61
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G122.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G216.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G323.25
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B616.21
accessory axillary lymph node, adult.CNhs10475.1063-29H913.46
adrenal gland, adult.CNhs10508.49-24D75.79
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D63.96
adrenal gland, embryo E17.CNhs11043.1263-45I14.84
adrenal gland, embryo E18.CNhs11026.1262-18F56.78
adrenal gland, neonate N00.CNhs11191.1311-23C111.76
adrenal gland, neonate N25.CNhs11223.1377-27I34.15
amnion, adult pregnant day17.5.CNhs10488.583-22A827.19
aorta, adult.CNhs10498.46-23H110.84
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F56.96
bone (os femoris), neonate N16.CNhs11225.1525-43A69.28
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I26.07
colon, adult.CNhs10468.36-18H711.24
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C717.49
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D115.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D417.79
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F14.90
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.83
epididymis, adult.CNhs10490.58-23B215.42
eyeball, adult.CNhs10484.31-12G410.73
eyeball, embryo E12.CNhs11016.345-16C63.90
eyeball, embryo E14.CNhs10521.399-16E26.44
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C67.76
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G84.87
eyeball, neonate N16.CNhs11188.777-19A28.80
forelimb, embryo E11.CNhs10596.335-25E23.45
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A84.82
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C48.71
forelimb, embryo E18.CNhs11008.1520-43B57.00
gonad, embryo E13.CNhs11044.1564-45I64.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C814.04
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D211.84
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D513.92
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F54.93
heart, embryo E13.CNhs11013.376-3I95.40
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C84.72
heart, embryo E16.CNhs11021.457-17C63.86
heart, embryo E17.CNhs11025.479-18E57.44
heart, embryo E18.CNhs11030.1283-20G34.83
heart, neonate N00.CNhs11213.639-21E313.54
heart, neonate N03.CNhs11221.1349-25I24.77
heart, neonate N10.CNhs11118.749-24G19.19
heart, neonate N16.CNhs11209.782-15G114.35
heart, neonate N20.CNhs11127.821-26I611.55
heart, neonate N25.CNhs11196.1351-25D36.37
heart, neonate N30.CNhs11202.1390-42D216.37
hippocampus, adult.CNhs10478.13-16E85.47
hippocampus, neonate N00.CNhs11228.627-43G15.35
intestinal mucosa, adult.CNhs10506.860-29I319.16
intestine, adult.CNhs10496.178-9A35.55
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D83.09
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D35.56
intestine, embryo E18.CNhs10526.1289-20F75.33
intestine, neonate N00.CNhs11126.644-26D114.24
intestine, neonate N01.CNhs11192.1322-23E99.39
intestine, neonate N06.CNhs11102.688-20B811.06
intestine, neonate N07.CNhs11095.720-20F28.75
intestine, neonate N10.CNhs11098.755-23A59.55
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E313.62
intestine, neonate N30.CNhs11131.1384-42G118.52
kidney, embryo E14.CNhs10606.411-4I95.69
kidney, embryo E15.CNhs10997.434-16F83.43
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I23.67
kidney, embryo E18.CNhs11001.1288-20C76.21
kidney, neonate N00.CNhs11214.646-21G79.47
kidney, neonate N10.CNhs11206.758-6D58.66
kidney, neonate N20.CNhs11113.832-19I15.17
kidney, neonate N25.CNhs11122.1353-25F35.97
kidney, neonate N30.CNhs11203.1385-42H110.24
liver, adult pregnant day01.CNhs10466.508-5B214.23
liver, embryo E12.CNhs10601.355-15F83.34
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D73.85
liver, embryo E16.CNhs10523.462-17F55.55
liver, embryo E17.CNhs10510.481-18A38.66
liver, embryo E18.CNhs10579.499-43G49.49
liver, neonate N00.CNhs11117.641-24F447.02
liver, neonate N03.CNhs11123.1345-25G29.06
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H220.10
liver, neonate N10.CNhs11115.751-24B919.03
liver, neonate N20.CNhs11220.823-25A317.18
liver, neonate N25.CNhs11198.1368-26H116.50
liver, neonate N30.CNhs11106.1382-42D128.46
lung, adult.CNhs10474.28-22B125.87
lung, embryo E12.CNhs10522.354-16G25.50
lung, embryo E14.CNhs10604.404-26F85.21
lung, embryo E15.CNhs11020.432-17C55.77
lung, embryo E16.CNhs10998.458-17B68.45
lung, embryo E17.CNhs10605.480-44A611.39
lung, embryo E18.CNhs10583.1287-20I615.23
lung, neonate N00.CNhs11224.640-42C626.93
lung, neonate N06.CNhs11212.683-20E519.39
lung, neonate N07.CNhs11111.715-19A317.50
lung, neonate N10.CNhs11219.750-23E619.13
lung, neonate N20.CNhs11109.822-18A421.14
lung, neonate N25.CNhs11119.1359-25C719.69
lung, neonate N30.CNhs11133.1394-42H228.50
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H24.41
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A32.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.23
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C211.61
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I712.06
ovary, embryo E18.CNhs11040.505-44H74.10
ovary, neonate N00.CNhs11217.1299-22I411.24
oviduct, adult pregnant day01.CNhs10500.988-6G68.74
pancreas, adult.CNhs10486.34-16E423.89
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F24.53
pancreas, embryo E16.CNhs11003.460-26E510.94
pancreas, embryo E17.CNhs10599.1558-45G38.86
pancreas, embryo E18.CNhs10580.1535-43I713.83
pancreas, neonate N00.CNhs11105.645-26G920.67
pancreas, neonate N01.CNhs11138.1531-43D710.91
pancreas, neonate N02.CNhs11139.1539-43D813.90
pancreas, neonate N16.CNhs11136.787-43B621.49
pancreas, neonate N25.CNhs11094.1555-45E225.30
pancreas, neonate N30.CNhs11182.1548-44H539.19
pituitary gland, adult.CNhs10493.21-1G87.49
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C74.66
pituitary gland, embryo E14.CNhs11037.398-44A57.07
pituitary gland, embryo E15.CNhs10592.427-16B95.50
pituitary gland, embryo E16.CNhs11036.449-43F65.53
pituitary gland, embryo E17.CNhs11039.1265-44F59.87
pituitary gland, neonate N00.CNhs11190.1308-22E916.44
placenta, adult pregnant day10.CNhs10472.539-13I715.96
placenta, adult pregnant day17.CNhs10464.577-18G321.18
prostate, adult.CNhs10470.859-1F822.05
skin, adult.CNhs10492.30-1C318.47
skin, neonate N00.CNhs11124.650-25G422.28
skin, neonate N03.CNhs11215.662-22H310.98
skin, neonate N06.CNhs11097.693-20I513.97
skin, neonate N10.CNhs11108.762-6C417.73
small intestine, neonate N16.CNhs11114.790-21I113.99
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G26.15
spleen, embryo E16.CNhs11035.461-43C14.54
spleen, embryo E18.CNhs11011.1271-21F26.11
spleen, neonate N10.CNhs11116.752-24D13.96
spleen, neonate N20.CNhs11112.824-19H15.19
spleen, neonate N25.CNhs11099.1354-25G35.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C639.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C934.15
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D338.14
stomach, adult.CNhs10503.33-1H618.14
stomach, embryo E12.CNhs10588.356-43E33.32
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D43.46
stomach, embryo E17.CNhs11006.1035-18D56.27
stomach, embryo E18.CNhs10999.1286-20C610.04
stomach, neonate N03.CNhs11193.1340-24B811.73
stomach, neonate N07.CNhs11210.718-18A918.84
stomach, neonate N25.CNhs11104.1355-25E418.32
stomach, neonate N30.CNhs11134.1386-42I110.63
submandibular gland, adult.CNhs10469.59-29C121.75
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F54.78
testis, embryo E15.CNhs11034.443-27C53.64
testis, embryo E16.CNhs11033.470-26G56.03
testis, embryo E17.CNhs11029.486-18I55.17
testis, embryo E18.CNhs11027.503-18G56.59
testis, neonate N00.CNhs11189.1300-22B712.56
testis, neonate N07.CNhs11222.726-26I45.34
testis, neonate N10.CNhs11204.763-44D95.24
testis, neonate N20.CNhs11110.839-18H35.07
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B518.33
thymus, embryo E14.CNhs11041.402-44I43.85
thymus, embryo E15.CNhs11005.430-45I22.88
thymus, embryo E16.CNhs11002.456-26C55.85
thymus, embryo E17.CNhs10581.478-18C16.27
thymus, embryo E18.CNhs10595.1273-19G49.14
thymus, neonate N02.CNhs11181.1541-43F812.98
thymus, neonate N03.CNhs11137.2104-43C710.78
thymus, neonate N06.CNhs11197.681-26C413.13
thymus, neonate N07.CNhs11211.713-19D311.51
thymus, neonate N10.CNhs11194.748-24E412.00
thymus, neonate N20.CNhs11186.820-7A218.32
thymus, neonate N25.CNhs11125.1362-25G713.57
thymus, neonate N30.CNhs11132.1393-42G218.35
tongue, adult.CNhs10499.32-1B412.24
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.53
urinary bladder, adult.CNhs10481.879-12E411.98
uterus, adult pregnant day19.CNhs10497.590-15F512.57
uterus, adult.CNhs10509.92-27E59.52
vagina, adult.CNhs10502.89-27D510.93
vesicular gland, adult.CNhs10491.51-27F815.05
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.64
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I83.01
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H24.10
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F26.43
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.75
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.97
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.86
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.34
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.11
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.13
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.93
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.71
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.75
whole body, embryo E17.5.CNhs10513.490-9F97.14
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B37.02
whole body, neonate N00.CNhs10525.657-19C213.97
whole body, neonate N01.CNhs10576.659-23C620.28
whole body, neonate N06.CNhs10515.692-21D110.81
whole body, neonate N10.CNhs10518.761-6B48.35





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure5.63e-11118
endoderm5.63e-11118
presumptive endoderm5.63e-11118
digestive system2.64e-10116
digestive tract2.64e-10116
primitive gut2.64e-10116
subdivision of digestive tract7.26e-10114
endo-epithelium1.06e-0969
unilaminar epithelium1.42e-0866
foregut1.91e-0780
trunk5.17e-0790
gut epithelium5.86e-0755
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:75440488..75440525,-&oldid=4235552"