FFCP PHASE1:Mm9::chr1:107560432..107560443,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=227446 | |EntrezGene=227446 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=E9QM90,G3X9J4,Q148V7,Q9D743 | |UniProt=E9QM90,G3X9J4,Q148V7,Q9D743 | ||
|association_with_transcript=0bp_to_ENSMUST00000039173,ENSMUST00000086721,NM_029349,NM_173187,uc007cgi.2,uc007cgj.2,uc007cgk.2,uc007cgl.2,uc007cgm.2_5end | |association_with_transcript=0bp_to_ENSMUST00000039173,ENSMUST00000086721,NM_029349,NM_173187,uc007cgi.2,uc007cgj.2,uc007cgk.2,uc007cgl.2,uc007cgm.2_5end | ||
|cluster_id=chr1:107560432..107560443,+ | |||
|description=CAGE_peak_2_at_2310035C23Rik_5end | |description=CAGE_peak_2_at_2310035C23Rik_5end | ||
|id=chr1:107560432..107560443,+ | |id=chr1:107560432..107560443,+ | ||
|ontology_enrichment_celltype=CL:0000117!8.94e-09!23;CL:0000337!8.94e-09!23;CL:0000540!9.02e-08!33;CL:0000047!9.02e-08!33;CL:0000031!9.02e-08!33;CL:0000404!9.02e-08!33 | |ontology_enrichment_celltype=CL:0000117!8.94e-09!23;CL:0000337!8.94e-09!23;CL:0000540!9.02e-08!33;CL:0000047!9.02e-08!33;CL:0000031!9.02e-08!33;CL:0000404!9.02e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.90e-09,23;CL:0000337,8.90e-09,23;CL:0000540,8.99e-08,33;CL:0000047,8.99e-08,33;CL:0000031,8.99e-08,33;CL:0000404,8.99e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.39e-16!52;UBERON:0005068!8.39e-16!52;UBERON:0006241!8.39e-16!52;UBERON:0007135!8.39e-16!52;UBERON:0000033!7.95e-15!63;UBERON:0001017!1.11e-14!73;UBERON:0005743!1.11e-14!73;UBERON:0000955!1.52e-14!50;UBERON:0006238!1.52e-14!50;UBERON:0002346!1.66e-14!71;UBERON:0003075!1.66e-14!71;UBERON:0007284!1.66e-14!71;UBERON:0002616!3.62e-14!49;UBERON:0000073!4.10e-14!75;UBERON:0001016!4.10e-14!75;UBERON:0004121!1.88e-13!102;UBERON:0000924!1.88e-13!102;UBERON:0006601!1.88e-13!102;UBERON:0002020!3.01e-13!34;UBERON:0003056!4.10e-12!49;UBERON:0003080!1.32e-11!40;UBERON:0002780!4.99e-11!39;UBERON:0001890!4.99e-11!39;UBERON:0006240!4.99e-11!39;UBERON:0002791!9.99e-11!29;UBERON:0003528!9.99e-11!29;UBERON:0001893!9.99e-11!29;UBERON:0000956!4.24e-08!21;UBERON:0001869!4.24e-08!21;UBERON:0000203!4.24e-08!21;UBERON:0002021!5.32e-08!10;UBERON:0000411!5.32e-08!10;UBERON:0001950!5.32e-08!10;UBERON:0007811!3.30e-07!86;UBERON:0002619!4.04e-07!17 | |ontology_enrichment_uberon=UBERON:0001049!8.39e-16!52;UBERON:0005068!8.39e-16!52;UBERON:0006241!8.39e-16!52;UBERON:0007135!8.39e-16!52;UBERON:0000033!7.95e-15!63;UBERON:0001017!1.11e-14!73;UBERON:0005743!1.11e-14!73;UBERON:0000955!1.52e-14!50;UBERON:0006238!1.52e-14!50;UBERON:0002346!1.66e-14!71;UBERON:0003075!1.66e-14!71;UBERON:0007284!1.66e-14!71;UBERON:0002616!3.62e-14!49;UBERON:0000073!4.10e-14!75;UBERON:0001016!4.10e-14!75;UBERON:0004121!1.88e-13!102;UBERON:0000924!1.88e-13!102;UBERON:0006601!1.88e-13!102;UBERON:0002020!3.01e-13!34;UBERON:0003056!4.10e-12!49;UBERON:0003080!1.32e-11!40;UBERON:0002780!4.99e-11!39;UBERON:0001890!4.99e-11!39;UBERON:0006240!4.99e-11!39;UBERON:0002791!9.99e-11!29;UBERON:0003528!9.99e-11!29;UBERON:0001893!9.99e-11!29;UBERON:0000956!4.24e-08!21;UBERON:0001869!4.24e-08!21;UBERON:0000203!4.24e-08!21;UBERON:0002021!5.32e-08!10;UBERON:0000411!5.32e-08!10;UBERON:0001950!5.32e-08!10;UBERON:0007811!3.30e-07!86;UBERON:0002619!4.04e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,6.51e-17,73;UBERON:0002346,8.82e-17,64;UBERON:0003075,8.82e-17,64;UBERON:0007284,8.82e-17,64;UBERON:0000073,9.67e-17,54;UBERON:0001049,8.68e-16,52;UBERON:0005068,8.68e-16,52;UBERON:0006241,8.68e-16,52;UBERON:0007135,8.68e-16,52;UBERON:0004121,5.92e-15,95;UBERON:0000924,5.92e-15,95;UBERON:0006601,5.92e-15,95;UBERON:0001017,1.22e-14,73;UBERON:0001016,4.50e-14,75;UBERON:0002020,2.87e-13,34;UBERON:0000955,3.22e-13,47;UBERON:0006238,3.22e-13,47;UBERON:0002616,7.55e-13,46;UBERON:0003056,3.94e-12,49;UBERON:0003080,1.27e-11,40;UBERON:0002780,4.79e-11,39;UBERON:0001890,4.79e-11,39;UBERON:0006240,4.79e-11,39;UBERON:0003528,9.55e-11,29;UBERON:0002791,9.55e-11,29;UBERON:0001893,9.55e-11,29;UBERON:0010314,4.86e-10,92;UBERON:0000956,4.06e-08,21;UBERON:0001869,4.06e-08,21;UBERON:0000203,4.06e-08,21;UBERON:0002021,5.30e-08,10;UBERON:0000411,5.30e-08,10;UBERON:0001950,5.30e-08,10;UBERON:0002619,3.87e-07,17 | |||
|phase1_expression=4.16387002472464,3.83872948403297,2.72999543633722,2.41971369045464,5.00895729946347,2.51818907867835,2.10251376535973,1.67860320474049,0.563154888606667,1.63845168425395,0.856089841127525,1.43589886191606,1.71200729931206,1.83582845079895,4.66353666541928,2.02475267389826,1.39912375625629,3.94327706697797,1.50825876966313,1.27316895539409,3.06155844543851,1.88652807281682,1.82839852397255,2.71987118748791,2.2940928106717,3.44539178469012,2.15380998079537,2.80112602491656,2.28028103347649,2.77233142735924,1.77384408524244,3.81018404075779,0,0,2.02196133825892,1.66234645358492,2.04169356262369,1.67412652294763,2.3440060335714,4.71171369576418,1.17646297606203,5.46436387966757,2.42755176515577,3.39921408534059,2.43304634926835,2.20256102594018,3.12956537739216,0.872100625521786,0.219686182734472,1.36100929351998,0.839918529752175,0,2.18117387875057,0.725362142011344,2.01656279485478,1.02903774414379,3.15186783932632,1.54701627683233,3.43937983461316,6.87688273053643,4.43681982454325,1.0165335962074,2.66788438833342,0.449949858640699,0.988866362566974,1.4209602298922,0.898800331555214,1.53687322128622,4.45865332926454,2.29510095163874,5.04779907243317,7.7125765789027,4.41737081903227,5.14461356702807,2.87536413054709,4.5960939330501,3.30347642998166,5.61824287574826,7.52672012955593,3.56092976871523,5.6722339033494,2.08365348222704,5.02529398202486,3.93933827022176,5.65353516774197,4.71405736757868,6.40672563595963,5.03278503728312,2.04460721999597,2.41828992341714,2.31891590961342,3.44169550792555,2.719885334831,0.539703191637817,1.29955283489534,1.79210754838934,1.54488862144927,1.53387290320252,1.29893002301434,1.41335829804136,2.25349471642689,2.56652954828636,2.54805239706646,0,1.5154372870785,1.77351905832569,3.0331466700887,2.2836775943812,1.8125651855302,2.22663208597237,2.25530924795977,1.52232739156071,2.53677046981664,1.95939432718409,3.41007250693544,1.75933227861546,2.71914464507811,1.59059292611903,0.884610551949874,2.26473589926373,0.662524555381181,0.484875253135222,0,6.73395833126558,5.44561437714983,2.81002760729451,2.51611761462433,4.19931911695385,2.03312363316904,7.33974133083631,6.8625090422794,7.53926112677186,6.77914848749878,6.64860189058859,5.194701113989,6.00292673350703,3.97173519016234,3.23458123586242,2.77995034277042,2.73574412652416,2.47228841629137,1.37941262660084,3.24111833649629,2.56198190320716,4.69451844144162,3.84341160854549,3.93547243150861,6.72628763921441,1.07783996466421,2.64748512234947,1.93546236580344,2.6303487891309,2.22437799380478,3.83077383174383,2.05782136407943,1.99034266818493,4.21327912387941,2.83082697826187,3.12579849335152,2.07125772535502,2.11073453982987,2.34080679899319,2.84093682702252,1.77087808572663,2.1597395804233,1.62773761325285,1.87791380979733,3.85325629811659,1.48103864922132,1.47750717671186,2.10778904819225,1.60819986167866,1.97595103761946,3.08674763148855,6.9395683026162,5.65975368086064,2.97376904685418,1.58670339998127,1.70630600428187,2.32236671860439,2.70621668776396,3.02525286935014,3.7804267453628,3.42406127002606,1.42358718463353,2.79988223030818,2.5133520880027,2.78539060857611,1.75467678407208,0,1.72910439899755,1.1948476395262,1.70701110857774,2.39921876480431,6.76246414038483,2.03651327845314,1.16371492300575,3.22624771495465,2.15004226222475,1.77132177575523,2.04098346193787,1.60416313098341,1.1858105083486,1.50160595144485,1.37591296579242,3.14806957338795,1.82574109249653,0.72353147925725,1.2731292589071,1.43848068725405,2.7562988551756,1.92192989231657,0,4.46569137202204,1.87222603868736,1.26289438973556,1.07638448113147,0.964887042726734,2.40179147216586,1.89491411770485,2.93336957595647,2.71592137240301,3.28566347603903,3.51763140627813,3.80869825417622,2.34160377429359,3.15270288212382,4.20782910332672,4.46473352240964,2.45794972073607,3.28101465545202,2.4590339958857,1.50791283939272,1.08781136763742,2.95058563811422,1.10374698521893,5.61927064957272,7.3843362553088,2.13115428989678,1.51482556322624,3.47059041357882,2.34263246577983,4.52389135238878,1.19484398976276,2.67358408898873,2.26461224631066,2.42886421004937,2.92255857911312,2.76701444562566,4.17717711348349,1.41940085208269,2.31485284767432,4.39794790254655,2.63952196756057,2.65490276679926,2.42780636154981,1.81394134178851,1.88605079755898,2.06711325016541,1.84461088766356,3.10113951801865,3.27180356529755,1.78248689192361,2.21225730555071,1.05418608574999,2.06271086496374,3.06395645178409,3.78128297465751,1.68166288917581,3.21505552547388,3.19212420556092,2.67553226403106,3.78462747384878,1.8267896946876,2.3467170806371,3.38931313382112,2.42581237860458,4.61681508236144,2.58343082713449,2.77439454669517,4.05865969610664,3.11867709515616,0.874442509889552,4.26478194624172,1.53783792718067,2.06386867963222,3.1483069652851,1.69531611304222,2.32380187125743,3.20289442489132,2.03974115992626,2.23922323717853,2.76399947608848,0,3.32152793260192,2.84647253977588,1.72808545314882,3.55450103224597,2.62035076495413,2.15782954215713,2.64491058321075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| |phase1_expression=4.16387002472464,3.83872948403297,2.72999543633722,2.41971369045464,5.00895729946347,2.51818907867835,2.10251376535973,1.67860320474049,0.563154888606667,1.63845168425395,0.856089841127525,1.43589886191606,1.71200729931206,1.83582845079895,4.66353666541928,2.02475267389826,1.39912375625629,3.94327706697797,1.50825876966313,1.27316895539409,3.06155844543851,1.88652807281682,1.82839852397255,2.71987118748791,2.2940928106717,3.44539178469012,2.15380998079537,2.80112602491656,2.28028103347649,2.77233142735924,1.77384408524244,3.81018404075779,0,0,2.02196133825892,1.66234645358492,2.04169356262369,1.67412652294763,2.3440060335714,4.71171369576418,1.17646297606203,5.46436387966757,2.42755176515577,3.39921408534059,2.43304634926835,2.20256102594018,3.12956537739216,0.872100625521786,0.219686182734472,1.36100929351998,0.839918529752175,0,2.18117387875057,0.725362142011344,2.01656279485478,1.02903774414379,3.15186783932632,1.54701627683233,3.43937983461316,6.87688273053643,4.43681982454325,1.0165335962074,2.66788438833342,0.449949858640699,0.988866362566974,1.4209602298922,0.898800331555214,1.53687322128622,4.45865332926454,2.29510095163874,5.04779907243317,7.7125765789027,4.41737081903227,5.14461356702807,2.87536413054709,4.5960939330501,3.30347642998166,5.61824287574826,7.52672012955593,3.56092976871523,5.6722339033494,2.08365348222704,5.02529398202486,3.93933827022176,5.65353516774197,4.71405736757868,6.40672563595963,5.03278503728312,2.04460721999597,2.41828992341714,2.31891590961342,3.44169550792555,2.719885334831,0.539703191637817,1.29955283489534,1.79210754838934,1.54488862144927,1.53387290320252,1.29893002301434,1.41335829804136,2.25349471642689,2.56652954828636,2.54805239706646,0,1.5154372870785,1.77351905832569,3.0331466700887,2.2836775943812,1.8125651855302,2.22663208597237,2.25530924795977,1.52232739156071,2.53677046981664,1.95939432718409,3.41007250693544,1.75933227861546,2.71914464507811,1.59059292611903,0.884610551949874,2.26473589926373,0.662524555381181,0.484875253135222,0,6.73395833126558,5.44561437714983,2.81002760729451,2.51611761462433,4.19931911695385,2.03312363316904,7.33974133083631,6.8625090422794,7.53926112677186,6.77914848749878,6.64860189058859,5.194701113989,6.00292673350703,3.97173519016234,3.23458123586242,2.77995034277042,2.73574412652416,2.47228841629137,1.37941262660084,3.24111833649629,2.56198190320716,4.69451844144162,3.84341160854549,3.93547243150861,6.72628763921441,1.07783996466421,2.64748512234947,1.93546236580344,2.6303487891309,2.22437799380478,3.83077383174383,2.05782136407943,1.99034266818493,4.21327912387941,2.83082697826187,3.12579849335152,2.07125772535502,2.11073453982987,2.34080679899319,2.84093682702252,1.77087808572663,2.1597395804233,1.62773761325285,1.87791380979733,3.85325629811659,1.48103864922132,1.47750717671186,2.10778904819225,1.60819986167866,1.97595103761946,3.08674763148855,6.9395683026162,5.65975368086064,2.97376904685418,1.58670339998127,1.70630600428187,2.32236671860439,2.70621668776396,3.02525286935014,3.7804267453628,3.42406127002606,1.42358718463353,2.79988223030818,2.5133520880027,2.78539060857611,1.75467678407208,0,1.72910439899755,1.1948476395262,1.70701110857774,2.39921876480431,6.76246414038483,2.03651327845314,1.16371492300575,3.22624771495465,2.15004226222475,1.77132177575523,2.04098346193787,1.60416313098341,1.1858105083486,1.50160595144485,1.37591296579242,3.14806957338795,1.82574109249653,0.72353147925725,1.2731292589071,1.43848068725405,2.7562988551756,1.92192989231657,0,4.46569137202204,1.87222603868736,1.26289438973556,1.07638448113147,0.964887042726734,2.40179147216586,1.89491411770485,2.93336957595647,2.71592137240301,3.28566347603903,3.51763140627813,3.80869825417622,2.34160377429359,3.15270288212382,4.20782910332672,4.46473352240964,2.45794972073607,3.28101465545202,2.4590339958857,1.50791283939272,1.08781136763742,2.95058563811422,1.10374698521893,5.61927064957272,7.3843362553088,2.13115428989678,1.51482556322624,3.47059041357882,2.34263246577983,4.52389135238878,1.19484398976276,2.67358408898873,2.26461224631066,2.42886421004937,2.92255857911312,2.76701444562566,4.17717711348349,1.41940085208269,2.31485284767432,4.39794790254655,2.63952196756057,2.65490276679926,2.42780636154981,1.81394134178851,1.88605079755898,2.06711325016541,1.84461088766356,3.10113951801865,3.27180356529755,1.78248689192361,2.21225730555071,1.05418608574999,2.06271086496374,3.06395645178409,3.78128297465751,1.68166288917581,3.21505552547388,3.19212420556092,2.67553226403106,3.78462747384878,1.8267896946876,2.3467170806371,3.38931313382112,2.42581237860458,4.61681508236144,2.58343082713449,2.77439454669517,4.05865969610664,3.11867709515616,0.874442509889552,4.26478194624172,1.53783792718067,2.06386867963222,3.1483069652851,1.69531611304222,2.32380187125743,3.20289442489132,2.03974115992626,2.23922323717853,2.76399947608848,0,3.32152793260192,2.84647253977588,1.72808545314882,3.55450103224597,2.62035076495413,2.15782954215713,2.64491058321075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| ||
|short_description=p2@2310035C23Rik | |short_description=p2@2310035C23Rik | ||
}} | }} |
Latest revision as of 05:32, 26 September 2015
Short description: | p2@2310035C23Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_2310035C23Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000039173, ENSMUST00000086721, NM_029349, NM_173187, uc007cgi.2, uc007cgj.2, uc007cgk.2, uc007cgl.2, uc007cgm.2_5end |
EntrezGene: | 2310035C23Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.90e-09 | 23 |
neuroblast (sensu Vertebrata) | 8.90e-09 | 23 |
neuron | 8.99e-08 | 33 |
neuronal stem cell | 8.99e-08 | 33 |
neuroblast | 8.99e-08 | 33 |
electrically signaling cell | 8.99e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 6.51e-17 | 73 |
neurectoderm | 8.82e-17 | 64 |
neural plate | 8.82e-17 | 64 |
presumptive neural plate | 8.82e-17 | 64 |
regional part of nervous system | 9.67e-17 | 54 |
neural tube | 8.68e-16 | 52 |
neural rod | 8.68e-16 | 52 |
future spinal cord | 8.68e-16 | 52 |
neural keel | 8.68e-16 | 52 |
ectoderm-derived structure | 5.92e-15 | 95 |
ectoderm | 5.92e-15 | 95 |
presumptive ectoderm | 5.92e-15 | 95 |
central nervous system | 1.22e-14 | 73 |
nervous system | 4.50e-14 | 75 |
gray matter | 2.87e-13 | 34 |
brain | 3.22e-13 | 47 |
future brain | 3.22e-13 | 47 |
regional part of brain | 7.55e-13 | 46 |
pre-chordal neural plate | 3.94e-12 | 49 |
anterior neural tube | 1.27e-11 | 40 |
regional part of forebrain | 4.79e-11 | 39 |
forebrain | 4.79e-11 | 39 |
future forebrain | 4.79e-11 | 39 |
brain grey matter | 9.55e-11 | 29 |
regional part of telencephalon | 9.55e-11 | 29 |
telencephalon | 9.55e-11 | 29 |
structure with developmental contribution from neural crest | 4.86e-10 | 92 |
cerebral cortex | 4.06e-08 | 21 |
cerebral hemisphere | 4.06e-08 | 21 |
pallium | 4.06e-08 | 21 |
occipital lobe | 5.30e-08 | 10 |
visual cortex | 5.30e-08 | 10 |
neocortex | 5.30e-08 | 10 |
regional part of cerebral cortex | 3.87e-07 | 17 |