FFCP PHASE1:Mm9::chr1:109486534..109486555,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20725 | |EntrezGene=20725 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=O08800,Q8C871 | |UniProt=O08800,Q8C871 | ||
|association_with_transcript=-27bp_to_ENSMUST00000000514,ENSMUST00000112706,NM_001159748,NM_011459,uc007chr.2,uc007chs.2,uc007cht.2_5end | |association_with_transcript=-27bp_to_ENSMUST00000000514,ENSMUST00000112706,NM_001159748,NM_011459,uc007chr.2,uc007chs.2,uc007cht.2_5end | ||
|cluster_id=chr1:109486534..109486555,+ | |||
|description=CAGE_peak_3_at_Serpinb8_5end | |description=CAGE_peak_3_at_Serpinb8_5end | ||
|id=chr1:109486534..109486555,+ | |id=chr1:109486534..109486555,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,7.82e-09,90;UBERON:0009569,1.28e-08,66;UBERON:0005177,2.36e-08,79;UBERON:0004111,3.06e-07,122 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14742044938943,2.23029248682932,0.367093504323363,0,1.74420125104357,0.439372365468944,1.1665793944457,0.839918529752175,1.43752564364972,0,0,0,0,0.286533439938757,0,0,0,0,0,0.889294796111139,0,2.96659908770092,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0.56276261003168,0.30559649555362,0,0,0.186399445825301,0.075726193333184,0.151143120213571,1.44932244350839,0,0,0.539703191637817,1.29955283489534,1.34408066129201,0.842666520790511,0.852151612890289,0.519572009205738,1.06001872353102,0.422530259330042,0,0,0,0.216491041011214,0,0,0.68510327831436,0,0.148442139064825,0,0.304465478312141,0,0,0,0.376999773989026,0,0.722996784599558,0,0.161766849947409,0.883366073841574,0,0,0.292780797011547,0.209446706813455,0,0.11981512450592,0,0,0,0,0,1.21677024134594,0.767146371990992,0,0,0.407357455401265,0.373220911830279,0,0.631325567659422,0.260240885925407,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0.187403449119458,0.776110112217047,0,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0.469052119962192,0.540186184383045,0,0.393528463494808,1.69693824176116,0.697601834251224,1.60964040839772,1.75148013550754,0.329119699826961,0.492502392237286,0.486412857275134,0.292399974850665,0.439100230582101,0.134206418760372,0.210289948564127,0.205809224758569,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0,0.140271639780637,2.52946148497029,4.87113488332687,4.86696056308262,4.56569506510662,1.48226313543574,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,1.76805214562978,1.97337154874103,2.41221760681684,1.84753190166605,0,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0,2.20689201748667,1.10732344824387,2.07291199254733,1.47476983244164,2.07221978239075,0.867894351489069,0,0.54390568381871,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,1.15479086080775,0,0,0,0,0.295301892880773,0,0,0,0.356497378384721,0.948110273807448,1.05418608574999,1.03135543248187,0.340439605753788,0,0,0,0.354680467284547,0.356737635204141,0.658196082408484,0.608929898229199,0,0,0,1.15420377059036,0,1.02531972377865,0.596861720015682,0.656563598980245,0,0,0.341741761595705,0,0,0.565105371014073,0,0,0,0,0,0,0,0.406638934253697,0,0.418176592028937,0.436725127492355,0.539457385539283,0.330613822901344,0.523511883968059,0.259229946583586,0.621339313086926,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0.15241361331,0,0.194915761479505,0,0,0.226730383615211,0,0.358855426437903,0,0.386379188064381,0.563047426353546,0.36630324853453,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0,0.900642406448441,0.453142408984205,1.03552062350364,0.518936737920883,0,0,0.486213434136588,0,0,0.44449345560323,0.206035057238894,0,0.252697211763798,1.01391719956096,0,0.280924522409647,0.320125762024346,0.229741875822453,0,0,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.543216455383447,0,0.118635018124174,0.197008964751127,0.818462086339379,0.154936841185966,0,0.499621155875892,0.233931608445408,0.644613162144895,0.191288332068843,0.220591419119515,0.463735671240843 | |phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14742044938943,2.23029248682932,0.367093504323363,0,1.74420125104357,0.439372365468944,1.1665793944457,0.839918529752175,1.43752564364972,0,0,0,0,0.286533439938757,0,0,0,0,0,0.889294796111139,0,2.96659908770092,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0.56276261003168,0.30559649555362,0,0,0.186399445825301,0.075726193333184,0.151143120213571,1.44932244350839,0,0,0.539703191637817,1.29955283489534,1.34408066129201,0.842666520790511,0.852151612890289,0.519572009205738,1.06001872353102,0.422530259330042,0,0,0,0.216491041011214,0,0,0.68510327831436,0,0.148442139064825,0,0.304465478312141,0,0,0,0.376999773989026,0,0.722996784599558,0,0.161766849947409,0.883366073841574,0,0,0.292780797011547,0.209446706813455,0,0.11981512450592,0,0,0,0,0,1.21677024134594,0.767146371990992,0,0,0.407357455401265,0.373220911830279,0,0.631325567659422,0.260240885925407,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0.187403449119458,0.776110112217047,0,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0.469052119962192,0.540186184383045,0,0.393528463494808,1.69693824176116,0.697601834251224,1.60964040839772,1.75148013550754,0.329119699826961,0.492502392237286,0.486412857275134,0.292399974850665,0.439100230582101,0.134206418760372,0.210289948564127,0.205809224758569,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0,0.140271639780637,2.52946148497029,4.87113488332687,4.86696056308262,4.56569506510662,1.48226313543574,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,1.76805214562978,1.97337154874103,2.41221760681684,1.84753190166605,0,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0,2.20689201748667,1.10732344824387,2.07291199254733,1.47476983244164,2.07221978239075,0.867894351489069,0,0.54390568381871,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,1.15479086080775,0,0,0,0,0.295301892880773,0,0,0,0.356497378384721,0.948110273807448,1.05418608574999,1.03135543248187,0.340439605753788,0,0,0,0.354680467284547,0.356737635204141,0.658196082408484,0.608929898229199,0,0,0,1.15420377059036,0,1.02531972377865,0.596861720015682,0.656563598980245,0,0,0.341741761595705,0,0,0.565105371014073,0,0,0,0,0,0,0,0.406638934253697,0,0.418176592028937,0.436725127492355,0.539457385539283,0.330613822901344,0.523511883968059,0.259229946583586,0.621339313086926,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0.15241361331,0,0.194915761479505,0,0,0.226730383615211,0,0.358855426437903,0,0.386379188064381,0.563047426353546,0.36630324853453,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0,0.900642406448441,0.453142408984205,1.03552062350364,0.518936737920883,0,0,0.486213434136588,0,0,0.44449345560323,0.206035057238894,0,0.252697211763798,1.01391719956096,0,0.280924522409647,0.320125762024346,0.229741875822453,0,0,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.543216455383447,0,0.118635018124174,0.197008964751127,0.818462086339379,0.154936841185966,0,0.499621155875892,0.233931608445408,0.644613162144895,0.191288332068843,0.220591419119515,0.463735671240843 | ||
|short_description=p3@Serpinb8 | |short_description=p3@Serpinb8 | ||
}} | }} |
Latest revision as of 05:56, 26 September 2015
Short description: | p3@Serpinb8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Serpinb8_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_ENSMUST00000000514, ENSMUST00000112706, NM_001159748, NM_011459, uc007chr.2, uc007chs.2, uc007cht.2_5end |
EntrezGene: | Serpinb8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk | 7.82e-09 | 90 |
subdivision of trunk | 1.28e-08 | 66 |
trunk region element | 2.36e-08 | 79 |
anatomical conduit | 3.06e-07 | 122 |