FFCP PHASE1:Mm9::chr10:68996551..68996596,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11735 | |EntrezGene=11735 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |MCL_coexpression_id=13 | ||
|TSSclassifier=NA | |||
|UniProt=G3X971,Q3UVY0,Q8VC68,Q9QXH1 | |UniProt=G3X971,Q3UVY0,Q8VC68,Q9QXH1 | ||
|association_with_transcript=95bp_to_NM_146005,NM_170688,NM_170689,NM_170690,NM_170728,NM_170729,NM_170730,uc007fmt.1,uc007fmu.1,uc007fmv.1,uc007fmw.1,uc007fmx.1,uc007fmy.1,uc007fmz.1,uc007fna.1,uc007fnb.1,uc007fnc.1_5end | |association_with_transcript=95bp_to_NM_146005,NM_170688,NM_170689,NM_170690,NM_170728,NM_170729,NM_170730,uc007fmt.1,uc007fmu.1,uc007fmv.1,uc007fmw.1,uc007fmx.1,uc007fmy.1,uc007fmz.1,uc007fna.1,uc007fnb.1,uc007fnc.1_5end | ||
|cluster_id=chr10:68996551..68996596,+ | |||
|description=CAGE_peak_1_at_Ank3_5end | |description=CAGE_peak_1_at_Ank3_5end | ||
|id=chr10:68996551..68996596,+ | |id=chr10:68996551..68996596,+ | ||
Latest revision as of 05:59, 26 September 2015
| Short description: | p1@Ank3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Ank3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:13 |
| Association with transcript: | 95bp_to_NM_146005, NM_170688, NM_170689, NM_170690, NM_170728, NM_170729, NM_170730, uc007fmt.1, uc007fmu.1, uc007fmv.1, uc007fmw.1, uc007fmx.1, uc007fmy.1, uc007fmz.1, uc007fna.1, uc007fnb.1, uc007fnc.1_5end |
| EntrezGene: | Ank3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 8.09e-14 | 23 |
| neuroblast (sensu Vertebrata) | 8.09e-14 | 23 |
| neuron | 1.82e-11 | 33 |
| neuronal stem cell | 1.82e-11 | 33 |
| neuroblast | 1.82e-11 | 33 |
| electrically signaling cell | 1.82e-11 | 33 |
| electrically responsive cell | 1.61e-10 | 39 |
| electrically active cell | 1.61e-10 | 39 |
| neural cell | 5.23e-08 | 43 |
| ectodermal cell | 6.51e-08 | 44 |
| neurectodermal cell | 6.51e-08 | 44 |
| Ontology term | p-value | n |
|---|---|---|
| neurectoderm | 2.75e-21 | 64 |
| neural plate | 2.75e-21 | 64 |
| presumptive neural plate | 2.75e-21 | 64 |
| regional part of nervous system | 9.98e-21 | 54 |
| structure with developmental contribution from neural crest | 1.95e-20 | 92 |
| nervous system | 8.28e-20 | 75 |
| gray matter | 1.34e-19 | 34 |
| neural tube | 1.61e-19 | 52 |
| neural rod | 1.61e-19 | 52 |
| future spinal cord | 1.61e-19 | 52 |
| neural keel | 1.61e-19 | 52 |
| central nervous system | 2.03e-19 | 73 |
| ectoderm-derived structure | 1.30e-18 | 95 |
| ectoderm | 1.30e-18 | 95 |
| presumptive ectoderm | 1.30e-18 | 95 |
| pre-chordal neural plate | 1.55e-18 | 49 |
| ecto-epithelium | 4.02e-18 | 73 |
| brain | 1.09e-16 | 47 |
| future brain | 1.09e-16 | 47 |
| anterior neural tube | 1.47e-16 | 40 |
| brain grey matter | 1.81e-16 | 29 |
| regional part of telencephalon | 1.81e-16 | 29 |
| telencephalon | 1.81e-16 | 29 |
| regional part of brain | 4.15e-16 | 46 |
| regional part of forebrain | 4.42e-16 | 39 |
| forebrain | 4.42e-16 | 39 |
| future forebrain | 4.42e-16 | 39 |
| cerebral cortex | 8.08e-12 | 21 |
| cerebral hemisphere | 8.08e-12 | 21 |
| pallium | 8.08e-12 | 21 |
| regional part of cerebral cortex | 9.73e-10 | 17 |
| occipital lobe | 2.80e-08 | 10 |
| visual cortex | 2.80e-08 | 10 |
| neocortex | 2.80e-08 | 10 |
