FFCP PHASE1:Mm9::chr10:68996551..68996596,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11735 | |EntrezGene=11735 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=G3X971,Q3UVY0,Q8VC68,Q9QXH1 | |UniProt=G3X971,Q3UVY0,Q8VC68,Q9QXH1 | ||
|association_with_transcript=95bp_to_NM_146005,NM_170688,NM_170689,NM_170690,NM_170728,NM_170729,NM_170730,uc007fmt.1,uc007fmu.1,uc007fmv.1,uc007fmw.1,uc007fmx.1,uc007fmy.1,uc007fmz.1,uc007fna.1,uc007fnb.1,uc007fnc.1_5end | |association_with_transcript=95bp_to_NM_146005,NM_170688,NM_170689,NM_170690,NM_170728,NM_170729,NM_170730,uc007fmt.1,uc007fmu.1,uc007fmv.1,uc007fmw.1,uc007fmx.1,uc007fmy.1,uc007fmz.1,uc007fna.1,uc007fnb.1,uc007fnc.1_5end | ||
|cluster_id=chr10:68996551..68996596,+ | |||
|description=CAGE_peak_1_at_Ank3_5end | |description=CAGE_peak_1_at_Ank3_5end | ||
|id=chr10:68996551..68996596,+ | |id=chr10:68996551..68996596,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.55e-13!23;CL:0000337!1.55e-13!23;CL:0000540!3.07e-11!33;CL:0000047!3.07e-11!33;CL:0000031!3.07e-11!33;CL:0000404!3.07e-11!33;CL:0000393!1.82e-10!39;CL:0000211!1.82e-10!39;CL:0002319!2.41e-08!43;CL:0000221!3.05e-08!44;CL:0000133!3.05e-08!44;CL:0000055!1.81e-07!50 | |ontology_enrichment_celltype=CL:0000117!1.55e-13!23;CL:0000337!1.55e-13!23;CL:0000540!3.07e-11!33;CL:0000047!3.07e-11!33;CL:0000031!3.07e-11!33;CL:0000404!3.07e-11!33;CL:0000393!1.82e-10!39;CL:0000211!1.82e-10!39;CL:0002319!2.41e-08!43;CL:0000221!3.05e-08!44;CL:0000133!3.05e-08!44;CL:0000055!1.81e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.09e-14,23;CL:0000337,8.09e-14,23;CL:0000540,1.82e-11,33;CL:0000047,1.82e-11,33;CL:0000031,1.82e-11,33;CL:0000404,1.82e-11,33;CL:0000393,1.61e-10,39;CL:0000211,1.61e-10,39;CL:0002319,5.23e-08,43;CL:0000221,6.51e-08,44;CL:0000133,6.51e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.05e-20!75;UBERON:0001016!5.05e-20!75;UBERON:0002346!1.19e-19!71;UBERON:0003075!1.19e-19!71;UBERON:0007284!1.19e-19!71;UBERON:0001017!1.22e-19!73;UBERON:0005743!1.22e-19!73;UBERON:0002020!3.50e-19!34;UBERON:0001049!4.18e-19!52;UBERON:0005068!4.18e-19!52;UBERON:0006241!4.18e-19!52;UBERON:0007135!4.18e-19!52;UBERON:0000033!2.86e-18!63;UBERON:0004121!3.08e-18!102;UBERON:0000924!3.08e-18!102;UBERON:0006601!3.08e-18!102;UBERON:0003056!3.82e-18!49;UBERON:0000955!8.25e-18!50;UBERON:0006238!8.25e-18!50;UBERON:0002616!3.13e-17!49;UBERON:0003080!3.26e-16!40;UBERON:0002791!3.98e-16!29;UBERON:0003528!3.98e-16!29;UBERON:0001893!3.98e-16!29;UBERON:0002780!9.55e-16!39;UBERON:0001890!9.55e-16!39;UBERON:0006240!9.55e-16!39;UBERON:0000153!1.53e-13!94;UBERON:0007811!2.76e-13!86;UBERON:0000956!1.39e-11!21;UBERON:0001869!1.39e-11!21;UBERON:0000203!1.39e-11!21;UBERON:0002619!1.50e-09!17;UBERON:0000468!1.76e-08!333;UBERON:0002021!4.00e-08!10;UBERON:0000411!4.00e-08!10;UBERON:0001950!4.00e-08!10 | |ontology_enrichment_uberon=UBERON:0000073!5.05e-20!75;UBERON:0001016!5.05e-20!75;UBERON:0002346!1.19e-19!71;UBERON:0003075!1.19e-19!71;UBERON:0007284!1.19e-19!71;UBERON:0001017!1.22e-19!73;UBERON:0005743!1.22e-19!73;UBERON:0002020!3.50e-19!34;UBERON:0001049!4.18e-19!52;UBERON:0005068!4.18e-19!52;UBERON:0006241!4.18e-19!52;UBERON:0007135!4.18e-19!52;UBERON:0000033!2.86e-18!63;UBERON:0004121!3.08e-18!102;UBERON:0000924!3.08e-18!102;UBERON:0006601!3.08e-18!102;UBERON:0003056!3.82e-18!49;UBERON:0000955!8.25e-18!50;UBERON:0006238!8.25e-18!50;UBERON:0002616!3.13e-17!49;UBERON:0003080!3.26e-16!40;UBERON:0002791!3.98e-16!29;UBERON:0003528!3.98e-16!29;UBERON:0001893!3.98e-16!29;UBERON:0002780!9.55e-16!39;UBERON:0001890!9.55e-16!39;UBERON:0006240!9.55e-16!39;UBERON:0000153!1.53e-13!94;UBERON:0007811!2.76e-13!86;UBERON:0000956!1.39e-11!21;UBERON:0001869!1.39e-11!21;UBERON:0000203!1.39e-11!21;UBERON:0002619!1.50e-09!17;UBERON:0000468!1.76e-08!333;UBERON:0002021!4.00e-08!10;UBERON:0000411!4.00e-08!10;UBERON:0001950!4.00e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.75e-21,64;UBERON:0003075,2.75e-21,64;UBERON:0007284,2.75e-21,64;UBERON:0000073,9.98e-21,54;UBERON:0010314,1.95e-20,92;UBERON:0001016,8.28e-20,75;UBERON:0002020,1.34e-19,34;UBERON:0001049,1.61e-19,52;UBERON:0005068,1.61e-19,52;UBERON:0006241,1.61e-19,52;UBERON:0007135,1.61e-19,52;UBERON:0001017,2.03e-19,73;UBERON:0004121,1.30e-18,95;UBERON:0000924,1.30e-18,95;UBERON:0006601,1.30e-18,95;UBERON:0003056,1.55e-18,49;UBERON:0010371,4.02e-18,73;UBERON:0000955,1.09e-16,47;UBERON:0006238,1.09e-16,47;UBERON:0003080,1.47e-16,40;UBERON:0003528,1.81e-16,29;UBERON:0002791,1.81e-16,29;UBERON:0001893,1.81e-16,29;UBERON:0002616,4.15e-16,46;UBERON:0002780,4.42e-16,39;UBERON:0001890,4.42e-16,39;UBERON:0006240,4.42e-16,39;UBERON:0000956,8.08e-12,21;UBERON:0001869,8.08e-12,21;UBERON:0000203,8.08e-12,21;UBERON:0002619,9.73e-10,17;UBERON:0002021,2.80e-08,10;UBERON:0000411,2.80e-08,10;UBERON:0001950,2.80e-08,10 | |||
|phase1_expression=2.5623815536767,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3283117090054,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6183799727762,16.4230628575614,23.3104375245336,3.12956537739216,1.09012578190223,2.63623419281366,3.88859798148567,0.699932108126813,2.87505128729943,0,0,0,0.257259436035947,1.14613375975503,2.57836046138721,87.6030275522058,95.2183762689659,96.9762047364454,4.74382344896785,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,30.381056406384,41.5818290061607,32.6003690094642,55.9875929431455,60.9597173026453,40.6669453393647,46.9642807989358,57.9107835564313,22.0231761998777,49.9257491913084,47.1572057096667,97.7277392080736,110.700048758916,110.95454792859,23.1721889171146,25.3243174514256,39.421947926417,65.9968031461016,111.192282704099,87.421340092066,16.7354887266337,10.4288752947364,3.76823835312181,0,0,0,0,0,2.66844398250329,7.49893419343454,4.93593408745451,3.5333957451034,5.0703631119605,19.2489716121477,17.8363667794652,7.11066703153331,0.865964164044856,0.253359865475099,0.505524445014783,2.51204535381932,0,2.22663208597237,7.63335437770998,6.39377504455497,4.84292544237723,7.08396410597326,12.6995803706561,0.879666139307728,0.247194967734374,0.722996784599558,0,6.47067399789637,2.20841518460394,3.39412677194655,0,8.49064311333487,9.63454851341893,0.255457055208591,0,0,0,26.8125244534633,129.015169994853,77.9056983099759,79.4377143278703,87.9661173216337,47.5834622041393,85.8256281628438,10.7949725681335,3.6078021476927,0.252722758433675,5.6819301089348,11.4505989807179,10.5754968039398,18.546399369951,20.7972648613287,18.9821832632205,24.2134931338366,19.021450085625,20.9549730298603,4.95806383745537,14.7502742530899,12.8444320639683,5.91828477554452,13.3462679628287,13.2335823278423,11.1122353660289,14.52950147775,0,0,0,18.8484453007307,18.9966108584688,12.244220179349,23.4377288229358,16.7249596985293,16.5065810789495,21.6256568617879,17.4377710909752,12.4938916332871,7.89887279584706,7.22336841948019,7.94474333549386,10.2339991197733,5.48875288227627,3.62357330653004,106.827293870577,74.4000347502226,0,0,5.75878276445132,7.43157349953403,9.02072229254653,6.6555563125703,6.22658522765637,3.42406127002606,0,2.14108641141214,3.77002813200404,2.58643413653496,1.55971269695296,0.898819408654221,0.648414149624083,0.995706366271836,3.79335801906163,10.2823661348756,14.6520056375005,9.16430975303914,11.0552917685547,8.55657002661886,4.93244989569207,2.80459281161244,1.8839847340965,2.34454611451421,0,1.50160595144485,1.17935397067922,0.449724224769707,0.202860121388503,0.72353147925725,0,1.72617682470486,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.369506380333209,3.60033682363921,2.28150967018836,1.52770577197669,2.11221223459652,1.84256883185997,0.952174563544055,0.975668239288994,1.26108115284953,0.8858587585951,0.159454768657487,0.491589944147214,0.863424909329478,0.289298117163023,0,0,0,1.65562047782839,16.3761601787548,23.3251256318484,21.4754778443445,8.07906967053994,3.78609863299508,5.0757036758563,10.1248996934415,4.77937595905104,7.35235624471901,11.6061377623421,3.23848561339915,7.01414058987149,11.0680577825027,65.8708698664704,7.38088443082997,13.5329858787114,14.1711654637611,8.41347627159931,0,11.4106898992841,6.34879469625977,4.33791683438566,2.65771703592696,7.99331384654211,3.6179961043551,6.18007340111759,4.9909632973861,1.26414703174326,0,0,7.48967132658334,5.221771726908,2.06973894052407,5.5727629108214,7.44828981297549,13.7343989553594,13.4930196893739,7.00269382963578,0.704015124191131,0.21183207086382,1.10264199027481,4.61681508236144,8.88054346827481,3.07595917133595,1.67121281604391,2.29797259643086,1.45740418314925,19.655082013114,0,8.46186158649212,2.96311243791539,0.188368457004691,0,0,0,0,0,0.954670618015114,5.06137589729817,13.0124458961183,7.66837919834789,7.94535524854981,6.33251434863915,4.18079473792944,3.38879168473877,0.26175594198403,1.29614973291793,0,0,2.54178128274764,1.15820943319968,1.94451188344048,2.45403664607689,1.68956125490778,5.51579021635044,3.51551839078665,1.8874681996628,0.241584120826006,0.576060012515731,2.21207784439725,8.71718425747706,15.7147764462186,11.6928740680016,10.5625750443814,10.9274745129696,5.28859977887863,6.05527061415767,5.65412119709627,2.89585865288999,3.2264379243789,2.43644701849381,3.2712026157712,2.92192255453922,6.34845074122592,0,0.0897138566094757,0,3.09103350451505,4.31669693537719,6.77661009788881,3.85863082342319,0,137.234697755947,136.256270006124,155.254684142076,231.486236616947,119.204358440092,129.927750351028,107.328577536857,108.527409977037,107.847893338241,94.2323767388312,6.74617759297148,29.9268655050773,22.5368359595457,17.9898970630538,9.64220548088719,10.4790799816508,22.2246727801615,24.3121367541895,17.6505565275498,17.436107611702,31.1779538864995,27.350819500981,29.497074853013,24.6496836758747,22.2849619547779,24.2909782554368,19.3526824327909,24.6923802193542,18.5438655361488,23.8462250617724,23.3151091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| |phase1_expression=2.5623815536767,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3283117090054,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6183799727762,16.4230628575614,23.3104375245336,3.12956537739216,1.09012578190223,2.63623419281366,3.88859798148567,0.699932108126813,2.87505128729943,0,0,0,0.257259436035947,1.14613375975503,2.57836046138721,87.6030275522058,95.2183762689659,96.9762047364454,4.74382344896785,0.889294796111139,0,0,0,0.599200221036809,0.384218305321555,30.381056406384,41.5818290061607,32.6003690094642,55.9875929431455,60.9597173026453,40.6669453393647,46.9642807989358,57.9107835564313,22.0231761998777,49.9257491913084,47.1572057096667,97.7277392080736,110.700048758916,110.95454792859,23.1721889171146,25.3243174514256,39.421947926417,65.9968031461016,111.192282704099,87.421340092066,16.7354887266337,10.4288752947364,3.76823835312181,0,0,0,0,0,2.66844398250329,7.49893419343454,4.93593408745451,3.5333957451034,5.0703631119605,19.2489716121477,17.8363667794652,7.11066703153331,0.865964164044856,0.253359865475099,0.505524445014783,2.51204535381932,0,2.22663208597237,7.63335437770998,6.39377504455497,4.84292544237723,7.08396410597326,12.6995803706561,0.879666139307728,0.247194967734374,0.722996784599558,0,6.47067399789637,2.20841518460394,3.39412677194655,0,8.49064311333487,9.63454851341893,0.255457055208591,0,0,0,26.8125244534633,129.015169994853,77.9056983099759,79.4377143278703,87.9661173216337,47.5834622041393,85.8256281628438,10.7949725681335,3.6078021476927,0.252722758433675,5.6819301089348,11.4505989807179,10.5754968039398,18.546399369951,20.7972648613287,18.9821832632205,24.2134931338366,19.021450085625,20.9549730298603,4.95806383745537,14.7502742530899,12.8444320639683,5.91828477554452,13.3462679628287,13.2335823278423,11.1122353660289,14.52950147775,0,0,0,18.8484453007307,18.9966108584688,12.244220179349,23.4377288229358,16.7249596985293,16.5065810789495,21.6256568617879,17.4377710909752,12.4938916332871,7.89887279584706,7.22336841948019,7.94474333549386,10.2339991197733,5.48875288227627,3.62357330653004,106.827293870577,74.4000347502226,0,0,5.75878276445132,7.43157349953403,9.02072229254653,6.6555563125703,6.22658522765637,3.42406127002606,0,2.14108641141214,3.77002813200404,2.58643413653496,1.55971269695296,0.898819408654221,0.648414149624083,0.995706366271836,3.79335801906163,10.2823661348756,14.6520056375005,9.16430975303914,11.0552917685547,8.55657002661886,4.93244989569207,2.80459281161244,1.8839847340965,2.34454611451421,0,1.50160595144485,1.17935397067922,0.449724224769707,0.202860121388503,0.72353147925725,0,1.72617682470486,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.369506380333209,3.60033682363921,2.28150967018836,1.52770577197669,2.11221223459652,1.84256883185997,0.952174563544055,0.975668239288994,1.26108115284953,0.8858587585951,0.159454768657487,0.491589944147214,0.863424909329478,0.289298117163023,0,0,0,1.65562047782839,16.3761601787548,23.3251256318484,21.4754778443445,8.07906967053994,3.78609863299508,5.0757036758563,10.1248996934415,4.77937595905104,7.35235624471901,11.6061377623421,3.23848561339915,7.01414058987149,11.0680577825027,65.8708698664704,7.38088443082997,13.5329858787114,14.1711654637611,8.41347627159931,0,11.4106898992841,6.34879469625977,4.33791683438566,2.65771703592696,7.99331384654211,3.6179961043551,6.18007340111759,4.9909632973861,1.26414703174326,0,0,7.48967132658334,5.221771726908,2.06973894052407,5.5727629108214,7.44828981297549,13.7343989553594,13.4930196893739,7.00269382963578,0.704015124191131,0.21183207086382,1.10264199027481,4.61681508236144,8.88054346827481,3.07595917133595,1.67121281604391,2.29797259643086,1.45740418314925,19.655082013114,0,8.46186158649212,2.96311243791539,0.188368457004691,0,0,0,0,0,0.954670618015114,5.06137589729817,13.0124458961183,7.66837919834789,7.94535524854981,6.33251434863915,4.18079473792944,3.38879168473877,0.26175594198403,1.29614973291793,0,0,2.54178128274764,1.15820943319968,1.94451188344048,2.45403664607689,1.68956125490778,5.51579021635044,3.51551839078665,1.8874681996628,0.241584120826006,0.576060012515731,2.21207784439725,8.71718425747706,15.7147764462186,11.6928740680016,10.5625750443814,10.9274745129696,5.28859977887863,6.05527061415767,5.65412119709627,2.89585865288999,3.2264379243789,2.43644701849381,3.2712026157712,2.92192255453922,6.34845074122592,0,0.0897138566094757,0,3.09103350451505,4.31669693537719,6.77661009788881,3.85863082342319,0,137.234697755947,136.256270006124,155.254684142076,231.486236616947,119.204358440092,129.927750351028,107.328577536857,108.527409977037,107.847893338241,94.2323767388312,6.74617759297148,29.9268655050773,22.5368359595457,17.9898970630538,9.64220548088719,10.4790799816508,22.2246727801615,24.3121367541895,17.6505565275498,17.436107611702,31.1779538864995,27.350819500981,29.497074853013,24.6496836758747,22.2849619547779,24.2909782554368,19.3526824327909,24.6923802193542,18.5438655361488,23.8462250617724,23.3151091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| ||
|short_description=p1@Ank3 | |short_description=p1@Ank3 | ||
}} | }} |
Latest revision as of 05:59, 26 September 2015
Short description: | p1@Ank3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ank3_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 95bp_to_NM_146005, NM_170688, NM_170689, NM_170690, NM_170728, NM_170729, NM_170730, uc007fmt.1, uc007fmu.1, uc007fmv.1, uc007fmw.1, uc007fmx.1, uc007fmy.1, uc007fmz.1, uc007fna.1, uc007fnb.1, uc007fnc.1_5end |
EntrezGene: | Ank3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.09e-14 | 23 |
neuroblast (sensu Vertebrata) | 8.09e-14 | 23 |
neuron | 1.82e-11 | 33 |
neuronal stem cell | 1.82e-11 | 33 |
neuroblast | 1.82e-11 | 33 |
electrically signaling cell | 1.82e-11 | 33 |
electrically responsive cell | 1.61e-10 | 39 |
electrically active cell | 1.61e-10 | 39 |
neural cell | 5.23e-08 | 43 |
ectodermal cell | 6.51e-08 | 44 |
neurectodermal cell | 6.51e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.75e-21 | 64 |
neural plate | 2.75e-21 | 64 |
presumptive neural plate | 2.75e-21 | 64 |
regional part of nervous system | 9.98e-21 | 54 |
structure with developmental contribution from neural crest | 1.95e-20 | 92 |
nervous system | 8.28e-20 | 75 |
gray matter | 1.34e-19 | 34 |
neural tube | 1.61e-19 | 52 |
neural rod | 1.61e-19 | 52 |
future spinal cord | 1.61e-19 | 52 |
neural keel | 1.61e-19 | 52 |
central nervous system | 2.03e-19 | 73 |
ectoderm-derived structure | 1.30e-18 | 95 |
ectoderm | 1.30e-18 | 95 |
presumptive ectoderm | 1.30e-18 | 95 |
pre-chordal neural plate | 1.55e-18 | 49 |
ecto-epithelium | 4.02e-18 | 73 |
brain | 1.09e-16 | 47 |
future brain | 1.09e-16 | 47 |
anterior neural tube | 1.47e-16 | 40 |
brain grey matter | 1.81e-16 | 29 |
regional part of telencephalon | 1.81e-16 | 29 |
telencephalon | 1.81e-16 | 29 |
regional part of brain | 4.15e-16 | 46 |
regional part of forebrain | 4.42e-16 | 39 |
forebrain | 4.42e-16 | 39 |
future forebrain | 4.42e-16 | 39 |
cerebral cortex | 8.08e-12 | 21 |
cerebral hemisphere | 8.08e-12 | 21 |
pallium | 8.08e-12 | 21 |
regional part of cerebral cortex | 9.73e-10 | 17 |
occipital lobe | 2.80e-08 | 10 |
visual cortex | 2.80e-08 | 10 |
neocortex | 2.80e-08 | 10 |