FFCP PHASE1:Mm9::chr17:33084317..33084332,-: Difference between revisions
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{{FFCP|EntrezGene=170716|HGNC=|MCL_coexpression_id=166|UniProt=B8JK07|association_with_transcript=0bp_to_ENSMUST00000139353_5end|description=CAGE_peak_1_at_Cyp4f13_5end|id=chr17:33084317..33084332,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.72e-11!43;UBERON:0004119!2.32e-10!130;UBERON:0000925!2.32e-10!130;UBERON:0006595!2.32e-10!130;UBERON:0001007!7.25e-10!128;UBERON:0001555!7.25e-10!128;UBERON:0007026!7.25e-10!128;UBERON:0004921!3.83e-09!126;UBERON:0004185!3.83e-09!126;UBERON:0005409!6.20e-09!59;UBERON:0000344!1.16e-07!15;UBERON:0005256!2.23e-07!47;UBERON:0007023!3.89e-07!51;UBERON:0001242!9.52e-07!13;UBERON:0000060!9.52e-07!13;UBERON:0001262!9.52e-07!13;UBERON:0004786!9.52e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.93e-12,31;UBERON:0004119,2.49e-09,118;UBERON:0000925,2.49e-09,118;UBERON:0006595,2.49e-09,118;UBERON:0001007,7.32e-09,116;UBERON:0001555,7.32e-09,116;UBERON:0007026,7.32e-09,116;UBERON:0005409,1.98e-08,47;UBERON:0004921,3.58e-08,114;UBERON:0000344,1.15e-07,15;UBERON:0005256,2.20e-07,45;UBERON:0007023,3.72e-07,51;UBERON:0001242,9.51e-07,13;UBERON:0001262,9.51e-07,13;UBERON:0004786,9.51e-07,13|phase1_expression=6.56610273129655,35.9444669868542,31.8499467572675,32.3636706098308,42.0752413154932,15.277013743982,9.1108929832255,9.42600261123507,2.53419699873,2.57470978954193,3.93801326918661,3.98860794976682,8.04643430676667,12.1514359362406,3.66420737997229,4.656931149966,1.39912375625629,15.1421839371954,13.0258711925452,14.429248161133,10.6304112688837,6.85107563286109,6.79119451761232,19.1990907352088,26.1526580416574,29.285830169866,24.5534337810673,19.8233534071018,50.1661827364827,46.6255740055872,18.6253628950456,2.54012269383853,2.46025915033828,0,11.554064790051,9.97407872150954,13.0668388007916,23.0192396905299,17.9707129240474,23.0350447348471,23.5292595212406,28.0048648832963,23.7900072985265,14.3522372492158,13.584508783415,9.54443111240744,8.60630478782843,2.8343270329458,7.24964403023757,5.63846707315422,5.45947044338914,4.31257693094915,7.3824346665404,3.62681071005672,5.04140698713696,1.28629718017973,6.30373567865265,4.64104883049698,0.606949382578793,0.528990979272033,0,7.45457970552091,5.33576877666684,17.997994345628,14.8329954385046,17.7620028736525,12.2836045312546,8.83702102239575,0.622137673850866,0.540023753326763,1.26194976810829,2.85650984403804,2.87129103237098,0.61245399607477,0.575072826109418,0,3.30347642998166,2.42605942361857,5.52983519722476,0.791317726381163,0.914876436024097,0,5.58365998002762,2.8138130501584,2.90316670775939,2.65165726926301,1.99320353118744,0.931997229126503,4.7707501799906,6.65029728939713,13.9134954576805,28.3939879403858,49.6379073606658,59.3673510801599,64.9776417447669,54.6592802258749,20.926218599631,3.40860645156115,1.81850203222008,1.06001872353102,9.15482228548423,10.2661181931454,7.64415719119937,0,4.97929394325792,5.57391704045217,4.54972000513305,39.8501740219519,18.9024655062435,14.1020032111584,4.8575891494518,10.0473607843007,11.3001593655469,18.0867168663147,13.9930561491489,10.4303270803631,16.3148678704687,17.930320258069,3.5384422077995,4.52947179852746,5.30019644304944,6.30337829075789,46.5979403045305,9.07620470735796,12.3573557019938,38.5740153364973,4.19352935770721,5.99902730993408,5.33694953706872,6.89036941262184,6.8625090422794,2.51308704225729,5.56237824615285,6.13717097592793,3.94797284663164,4.86723789203273,7.33243419722277,10.4501855312478,9.85618757891331,13.4682787767343,2.34216797332867,2.5289231487682,0.720248519221397,4.9732589885786,5.78310242786287,10.5053250633577,5.34099829990454,12.9351685369508,0.862271971731369,2.08016688184601,2.63926686245923,1.97276159184817,2.78047249225598,7.3132954969655,4.52720700097476,5.7719937377363,2.80885274925294,1.02939162845886,2.55747149456033,1.86413195281952,2.57978665979206,2.16074473753218,2.84093682702252,3.93528463494808,4.62801338662135,6.51095045301142,2.95100741539581,6.18856314545998,4.93679549740441,6.56669856316381,6.08016071593918,6.57899943413995,5.48875288227627,6.84452735677896,5.46753866266731,3.70456604565424,68.0662692946624,24.8583532663732,2.98603550749328,2.09013004674395,5.02583099156164,12.9077455758939,15.5664630691409,26.2511364035332,32.7425052465713,33.7632857184222,26.138861715228,31.634079054543,25.7352594997239,39.5480539807857,49.9278895210544,36.6419942788036,2.84501851429623,3.31320686568214,4.50830942692322,3.25842124552503,6.0125271021964,6.59276706968994,11.3193401452421,15.3514553898786,15.071877872772,18.5095745882701,70.2592726196543,0.667380422864376,1.96558995113203,2.69834534861824,2.43432145666204,6.02942899381042,6.87489799809833,20.1387296215567,22.5367965217299,26.0833342528677,12.9391385874619,20.8398930694362,27.7713529071959,33.3404118890188,35.7000852908605,49.2092391790635,12.7479701214957,1.89491411770485,2.60743962307241,2.37643120085263,5.39787571063555,7.03526281255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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=170716 | |||
|HGNC= | |||
|MCL_coexpression_id=166 | |||
|TSSclassifier=NA | |||
|UniProt=B8JK07 | |||
|association_with_transcript=0bp_to_ENSMUST00000139353_5end | |||
|cluster_id=chr17:33084317..33084332,- | |||
|description=CAGE_peak_1_at_Cyp4f13_5end | |||
|id=chr17:33084317..33084332,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.72e-11!43;UBERON:0004119!2.32e-10!130;UBERON:0000925!2.32e-10!130;UBERON:0006595!2.32e-10!130;UBERON:0001007!7.25e-10!128;UBERON:0001555!7.25e-10!128;UBERON:0007026!7.25e-10!128;UBERON:0004921!3.83e-09!126;UBERON:0004185!3.83e-09!126;UBERON:0005409!6.20e-09!59;UBERON:0000344!1.16e-07!15;UBERON:0005256!2.23e-07!47;UBERON:0007023!3.89e-07!51;UBERON:0001242!9.52e-07!13;UBERON:0000060!9.52e-07!13;UBERON:0001262!9.52e-07!13;UBERON:0004786!9.52e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.93e-12,31;UBERON:0004119,2.49e-09,118;UBERON:0000925,2.49e-09,118;UBERON:0006595,2.49e-09,118;UBERON:0001007,7.32e-09,116;UBERON:0001555,7.32e-09,116;UBERON:0007026,7.32e-09,116;UBERON:0005409,1.98e-08,47;UBERON:0004921,3.58e-08,114;UBERON:0000344,1.15e-07,15;UBERON:0005256,2.20e-07,45;UBERON:0007023,3.72e-07,51;UBERON:0001242,9.51e-07,13;UBERON:0001262,9.51e-07,13;UBERON:0004786,9.51e-07,13 | |||
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| |||
|short_description=p1@Cyp4f13 | |||
}} |
Latest revision as of 06:37, 26 September 2015
Short description: | p1@Cyp4f13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cyp4f13_5end |
Coexpression cluster: | MCL_coexpression_mm9:166 |
Association with transcript: | 0bp_to_ENSMUST00000139353_5end |
EntrezGene: | Cyp4f13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 7.93e-12 | 31 |
endoderm-derived structure | 2.49e-09 | 118 |
endoderm | 2.49e-09 | 118 |
presumptive endoderm | 2.49e-09 | 118 |
digestive system | 7.32e-09 | 116 |
digestive tract | 7.32e-09 | 116 |
primitive gut | 7.32e-09 | 116 |
gastrointestinal system | 1.98e-08 | 47 |
subdivision of digestive tract | 3.58e-08 | 114 |
mucosa | 1.15e-07 | 15 |
trunk mesenchyme | 2.20e-07 | 45 |
adult organism | 3.72e-07 | 51 |
intestinal mucosa | 9.51e-07 | 13 |
wall of intestine | 9.51e-07 | 13 |
gastrointestinal system mucosa | 9.51e-07 | 13 |