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FFCP PHASE1:Mm9::chr4:120527452..120527472,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=242662
|EntrezGene=242662
|HGNC=
|HGNC=
|MCL_coexpression_id=189
|TSSclassifier=NA
|UniProt=Q80U57
|UniProt=Q80U57
|association_with_transcript=28bp_to_ENSMUST00000071093_5end
|association_with_transcript=28bp_to_ENSMUST00000071093_5end
|cluster_id=chr4:120527452..120527472,+
|description=CAGE_peak_2_at_Rims3_5end
|description=CAGE_peak_2_at_Rims3_5end
|id=chr4:120527452..120527472,+
|id=chr4:120527452..120527472,+
|ontology_enrichment_celltype=CL:0000540!3.98e-14!33;CL:0000047!3.98e-14!33;CL:0000031!3.98e-14!33;CL:0000404!3.98e-14!33;CL:0000393!1.90e-09!39;CL:0000211!1.90e-09!39;CL:0000221!2.39e-09!44;CL:0000133!2.39e-09!44;CL:0000117!3.94e-09!23;CL:0000337!3.94e-09!23;CL:0002319!5.28e-09!43
|ontology_enrichment_celltype_v019_2=CL:0000540,1.47e-19,33;CL:0000047,1.47e-19,33;CL:0000031,1.47e-19,33;CL:0000404,1.47e-19,33;CL:0000393,5.27e-15,39;CL:0000211,5.27e-15,39;CL:0000221,3.29e-14,44;CL:0000133,3.29e-14,44;CL:0002319,1.13e-13,43;CL:0000117,5.29e-12,23;CL:0000337,5.29e-12,23;CL:0000107,3.42e-08,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.30e-25!75;UBERON:0001016!2.30e-25!75;UBERON:0001017!3.46e-25!73;UBERON:0005743!3.46e-25!73;UBERON:0004121!1.10e-23!102;UBERON:0000924!1.10e-23!102;UBERON:0006601!1.10e-23!102;UBERON:0002346!1.40e-23!71;UBERON:0003075!1.40e-23!71;UBERON:0007284!1.40e-23!71;UBERON:0000033!5.99e-18!63;UBERON:0001049!2.37e-17!52;UBERON:0005068!2.37e-17!52;UBERON:0006241!2.37e-17!52;UBERON:0007135!2.37e-17!52;UBERON:0000955!1.15e-16!50;UBERON:0006238!1.15e-16!50;UBERON:0002616!5.55e-16!49;UBERON:0003056!1.17e-14!49;UBERON:0003080!7.07e-13!40;UBERON:0002780!3.29e-12!39;UBERON:0001890!3.29e-12!39;UBERON:0006240!3.29e-12!39;UBERON:0002020!9.65e-12!34;UBERON:0007811!1.35e-10!86;UBERON:0002791!4.37e-09!29;UBERON:0003528!4.37e-09!29;UBERON:0001893!4.37e-09!29;UBERON:0000153!6.43e-08!94;UBERON:0002021!4.61e-07!10;UBERON:0000411!4.61e-07!10;UBERON:0001950!4.61e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.97e-37,73;UBERON:0001016,3.28e-37,75;UBERON:0004121,9.30e-32,95;UBERON:0000924,9.30e-32,95;UBERON:0006601,9.30e-32,95;UBERON:0002346,4.74e-27,64;UBERON:0003075,4.74e-27,64;UBERON:0007284,4.74e-27,64;UBERON:0000073,4.88e-27,54;UBERON:0001049,1.09e-24,52;UBERON:0005068,1.09e-24,52;UBERON:0006241,1.09e-24,52;UBERON:0007135,1.09e-24,52;UBERON:0010371,4.79e-24,73;UBERON:0010314,3.76e-21,92;UBERON:0000955,2.02e-20,47;UBERON:0006238,2.02e-20,47;UBERON:0002616,1.99e-19,46;UBERON:0003080,5.20e-17,40;UBERON:0003056,6.16e-17,49;UBERON:0002020,6.21e-17,34;UBERON:0002780,5.05e-16,39;UBERON:0001890,5.05e-16,39;UBERON:0006240,5.05e-16,39;UBERON:0003528,7.09e-13,29;UBERON:0002791,7.09e-13,29;UBERON:0001893,7.09e-13,29;UBERON:0002021,5.15e-10,10;UBERON:0000411,5.15e-10,10;UBERON:0001950,5.15e-10,10;UBERON:0003076,2.18e-08,12;UBERON:0003057,2.18e-08,12;UBERON:0002420,2.23e-08,8;UBERON:0007245,2.23e-08,8;UBERON:0010009,2.23e-08,8;UBERON:0010011,2.23e-08,8;UBERON:0000454,2.23e-08,8;UBERON:0002410,3.42e-08,9;UBERON:0002619,9.18e-08,17;UBERON:0000010,1.61e-07,11;UBERON:0000956,8.17e-07,21;UBERON:0001869,8.17e-07,21;UBERON:0000203,8.17e-07,21
|phase1_expression=3.20297694209588,0,0,0,0,0,0,0.258246646883153,0.84473233291,0.468129052643987,0,0,0.171200729931206,0.34968160967599,0.333109761815663,1.01237633694913,0,0.315462165358238,1.09691546884591,0.84877930359606,3.23164502574065,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,5.66486090406874,5.28990979272033,6.97214543856797,0,0,3.5995988691256,1.97773272513395,0,0,0.384218305321555,0.725827286159344,0.135005938331691,0,6.56997264128748,7.73039893330647,0.61245399607477,1.15014565221884,0,41.8440347797677,32.9433332259784,30.8749131845049,7.64940468835124,5.12330804173494,3.64639359389732,12.0048689570594,19.1339287410771,14.6686317865738,7.07108605136802,5.55249555116501,6.71038004971082,0.227178579999552,1.43585964202892,0,0.860423876981386,0,0,0,0.448026887097336,0.702222100658759,0,0,0,1.97180787687353,0,0,0,0.216491041011214,0,0,0.5709193985953,0,3.26572705942614,0.520455980298408,1.82679286987285,2.7673859670727,1.50722640552623,1.99900802130698,1.13099932196708,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0.484875253135222,0,19.9090941967852,32.0453461424586,0,0.11981512450592,0,0.127070227073065,26.3631525352488,5.03250663100489,3.8952849154988,14.6012428961512,8.95004100656157,33.8694512632083,18.9822277789276,0,0.373220911830279,0,0.631325567659422,0.390361328888111,1.14951052216736,2.16074555766419,2.10986744970001,1.76894897793452,0.512454881139399,1.21812241927647,0.517406741478031,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,2.52347938276953,2.36680608472354,0,0.264450566663544,0.426576501070468,0.928946687441754,0.38660238396628,0.201683524623343,0.444756087689741,0.760902504450237,0,0.329397909448022,0.251335208800269,0,0,0,0,0.199141273254367,0.189667900953082,0.342745537829186,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0.405720242777006,0,0,0,0.162135226775035,0.823684239564244,1.43768206527355,0.372140947668503,1.5601883655728,0.505157755894224,0.538192240565737,0.964887042726734,0,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0,0,0,0.54390568381871,0,0,9.63303539926752,8.55645312123083,0,0,3.47059041357882,6.24701990874622,6.24727853425117,3.10659437338318,1.78238939265915,2.26461224631066,9.71545684019746,9.35218745316198,7.51046778098395,16.3873871375122,0.141940085208269,0.35613120733451,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,1.55056975900933,0.363533729477506,0.356497378384721,0,0,0,2.7235168460303,0.18006109403131,0.258717367565509,0.643011105094777,1.95074257006501,2.67553226403106,3.1264313914403,7.00269382963578,0,0,0,0,0,0,0,0,0,11.1255181206306,1.87957968877638,0,0,1.31857919903284,0.546776910884101,2.51655990527175,0.169978429993855,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.330613822901344,0.26175594198403,0,0,0,0.598066184175915,0,1.94451188344048,1.42075805825504,1.18269287843545,0.117357238645754,0.781226309063701,1.25831213310853,0.483168241652012,0.288030006257865,0.316011120628178,0.202725215290164,0,0,0,0,0.360586348559907,0,0,0,0.100826185136841,0.0974578807397524,0.192423683280659,0.350630706544707,0,0,0,0,0,0,0,0,0,2.25900737046827,4.60325236507177,2.86447756719698,5.67115501734169,15.0718154349541,8.3093328712867,8.77529250301348,10.8077088773813,14.5005570874945,16.0505696643064,0.62272408550506,0.399024873401031,0.682934423016537,0.486213434136588,1.46729213839588,3.30918315210025,1.55572709461131,1.03017528619447,0.962757628775446,0.505394423527595,1.2673964994512,1.69763707247469,0.842773567228942,1.02440243847791,0.918967503289812,0.952587382566147,0.927074607558844,1.15745532278223,1.64834360321323,1.32479028120958,0.685738504770831,0.532427418478012,0.953744759789284,1.74415699958794,0.752875043322645,0.930760686808441,0.365855945745545,0.526139422875686,1.22223702461276,0,0.711810108745045,0.886540341380071,0,1.39443157067369,0.192906610981141,2.99772693525535,0.701794825336225,1.07435527024149,0.191288332068843,0.441182838239031,0.231867835620421
|phase1_expression=3.20297694209588,0,0,0,0,0,0,0.258246646883153,0.84473233291,0.468129052643987,0,0,0.171200729931206,0.34968160967599,0.333109761815663,1.01237633694913,0,0.315462165358238,1.09691546884591,0.84877930359606,3.23164502574065,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,5.66486090406874,5.28990979272033,6.97214543856797,0,0,3.5995988691256,1.97773272513395,0,0,0.384218305321555,0.725827286159344,0.135005938331691,0,6.56997264128748,7.73039893330647,0.61245399607477,1.15014565221884,0,41.8440347797677,32.9433332259784,30.8749131845049,7.64940468835124,5.12330804173494,3.64639359389732,12.0048689570594,19.1339287410771,14.6686317865738,7.07108605136802,5.55249555116501,6.71038004971082,0.227178579999552,1.43585964202892,0,0.860423876981386,0,0,0,0.448026887097336,0.702222100658759,0,0,0,1.97180787687353,0,0,0,0.216491041011214,0,0,0.5709193985953,0,3.26572705942614,0.520455980298408,1.82679286987285,2.7673859670727,1.50722640552623,1.99900802130698,1.13099932196708,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0.484875253135222,0,19.9090941967852,32.0453461424586,0,0.11981512450592,0,0.127070227073065,26.3631525352488,5.03250663100489,3.8952849154988,14.6012428961512,8.95004100656157,33.8694512632083,18.9822277789276,0,0.373220911830279,0,0.631325567659422,0.390361328888111,1.14951052216736,2.16074555766419,2.10986744970001,1.76894897793452,0.512454881139399,1.21812241927647,0.517406741478031,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,2.52347938276953,2.36680608472354,0,0.264450566663544,0.426576501070468,0.928946687441754,0.38660238396628,0.201683524623343,0.444756087689741,0.760902504450237,0,0.329397909448022,0.251335208800269,0,0,0,0,0.199141273254367,0.189667900953082,0.342745537829186,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0.405720242777006,0,0,0,0.162135226775035,0.823684239564244,1.43768206527355,0.372140947668503,1.5601883655728,0.505157755894224,0.538192240565737,0.964887042726734,0,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0,0,0,0.54390568381871,0,0,9.63303539926752,8.55645312123083,0,0,3.47059041357882,6.24701990874622,6.24727853425117,3.10659437338318,1.78238939265915,2.26461224631066,9.71545684019746,9.35218745316198,7.51046778098395,16.3873871375122,0.141940085208269,0.35613120733451,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,1.55056975900933,0.363533729477506,0.356497378384721,0,0,0,2.7235168460303,0.18006109403131,0.258717367565509,0.643011105094777,1.95074257006501,2.67553226403106,3.1264313914403,7.00269382963578,0,0,0,0,0,0,0,0,0,11.1255181206306,1.87957968877638,0,0,1.31857919903284,0.546776910884101,2.51655990527175,0.169978429993855,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.330613822901344,0.26175594198403,0,0,0,0.598066184175915,0,1.94451188344048,1.42075805825504,1.18269287843545,0.117357238645754,0.781226309063701,1.25831213310853,0.483168241652012,0.288030006257865,0.316011120628178,0.202725215290164,0,0,0,0,0.360586348559907,0,0,0,0.100826185136841,0.0974578807397524,0.192423683280659,0.350630706544707,0,0,0,0,0,0,0,0,0,2.25900737046827,4.60325236507177,2.86447756719698,5.67115501734169,15.0718154349541,8.3093328712867,8.77529250301348,10.8077088773813,14.5005570874945,16.0505696643064,0.62272408550506,0.399024873401031,0.682934423016537,0.486213434136588,1.46729213839588,3.30918315210025,1.55572709461131,1.03017528619447,0.962757628775446,0.505394423527595,1.2673964994512,1.69763707247469,0.842773567228942,1.02440243847791,0.918967503289812,0.952587382566147,0.927074607558844,1.15745532278223,1.64834360321323,1.32479028120958,0.685738504770831,0.532427418478012,0.953744759789284,1.74415699958794,0.752875043322645,0.930760686808441,0.365855945745545,0.526139422875686,1.22223702461276,0,0.711810108745045,0.886540341380071,0,1.39443157067369,0.192906610981141,2.99772693525535,0.701794825336225,1.07435527024149,0.191288332068843,0.441182838239031,0.231867835620421
|short_description=p2@Rims3
|short_description=p2@Rims3
}}
}}

Latest revision as of 06:57, 26 September 2015

Short description:p2@Rims3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rims3_5end
Coexpression cluster:MCL_coexpression_mm9:189
Association with transcript: 28bp_to_ENSMUST00000071093_5end
EntrezGene:Rims3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rims3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D341.84
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F332.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D730.87
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.65
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.71
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F91.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D73.27
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B219.91
cerebellum, neonate N30.CNhs11135.1395-42I232.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A426.36
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F13.90
cortex, adult.CNhs10473.12-14D514.60
cortex, neonate N30.CNhs11107.1392-42F28.95
diencephalon, adult.CNhs10482.20-12F233.87
diencephalon, neonate N30.CNhs11201.1388-42B218.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C61.77
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G12.37
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C29.63
medulla oblongata, neonate N30.CNhs11200.1396-42A38.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.72
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.35
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.51
olfactory brain, adult.CNhs10489.18-22I916.39
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E97.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C911.13
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A916.05
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.97e-3773
nervous system3.28e-3775
ectoderm-derived structure9.30e-3295
ectoderm9.30e-3295
presumptive ectoderm9.30e-3295
neurectoderm4.74e-2764
neural plate4.74e-2764
presumptive neural plate4.74e-2764
regional part of nervous system4.88e-2754
neural tube1.09e-2452
neural rod1.09e-2452
future spinal cord1.09e-2452
neural keel1.09e-2452
ecto-epithelium4.79e-2473
structure with developmental contribution from neural crest3.76e-2192
brain2.02e-2047
future brain2.02e-2047
regional part of brain1.99e-1946
anterior neural tube5.20e-1740
pre-chordal neural plate6.16e-1749
gray matter6.21e-1734
regional part of forebrain5.05e-1639
forebrain5.05e-1639
future forebrain5.05e-1639
brain grey matter7.09e-1329
regional part of telencephalon7.09e-1329
telencephalon7.09e-1329
occipital lobe5.15e-1010
visual cortex5.15e-1010
neocortex5.15e-1010
posterior neural tube2.18e-0812
chordal neural plate2.18e-0812
basal ganglion2.23e-088
nuclear complex of neuraxis2.23e-088
aggregate regional part of brain2.23e-088
collection of basal ganglia2.23e-088
cerebral subcortex2.23e-088
autonomic nervous system3.42e-089
regional part of cerebral cortex9.18e-0817
peripheral nervous system1.61e-0711
cerebral cortex8.17e-0721
cerebral hemisphere8.17e-0721
pallium8.17e-0721
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