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FFCP PHASE1:Mm9::chr5:89012494..89012509,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:89012494..89012509,+
|DHSsupport=NA
|short_description=p3@Rufy3
|DPIdataset=NA
|description=CAGE_peak_3_at_Rufy3_5end
|association_with_transcript=-28bp_to_uc008xzy.1_5end
|EntrezGene=52822
|EntrezGene=52822
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9D394
|UniProt=Q9D394
|association_with_transcript=-28bp_to_uc008xzy.1_5end
|cluster_id=chr5:89012494..89012509,+
|description=CAGE_peak_3_at_Rufy3_5end
|id=chr5:89012494..89012509,+
|ontology_enrichment_celltype=CL:0000540!1.32e-16!33;CL:0000047!1.32e-16!33;CL:0000031!1.32e-16!33;CL:0000404!1.32e-16!33;CL:0000393!6.24e-15!39;CL:0000211!6.24e-15!39;CL:0000221!8.33e-14!44;CL:0000133!8.33e-14!44;CL:0002319!9.42e-14!43;CL:0000117!4.69e-13!23;CL:0000337!4.69e-13!23;CL:0000055!4.65e-12!50
|ontology_enrichment_celltype_v019_2=CL:0000540,2.90e-18,33;CL:0000047,2.90e-18,33;CL:0000031,2.90e-18,33;CL:0000404,2.90e-18,33;CL:0000393,1.31e-16,39;CL:0000211,1.31e-16,39;CL:0000221,1.16e-14,44;CL:0000133,1.16e-14,44;CL:0002319,1.34e-14,43;CL:0000117,2.54e-14,23;CL:0000337,2.54e-14,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.72e-33!75;UBERON:0001016!3.72e-33!75;UBERON:0001017!3.80e-33!73;UBERON:0005743!3.80e-33!73;UBERON:0004121!1.33e-32!102;UBERON:0000924!1.33e-32!102;UBERON:0006601!1.33e-32!102;UBERON:0002346!6.23e-32!71;UBERON:0003075!6.23e-32!71;UBERON:0007284!6.23e-32!71;UBERON:0000033!1.14e-27!63;UBERON:0001049!4.76e-26!52;UBERON:0005068!4.76e-26!52;UBERON:0006241!4.76e-26!52;UBERON:0007135!4.76e-26!52;UBERON:0000955!1.84e-25!50;UBERON:0006238!1.84e-25!50;UBERON:0002616!8.22e-25!49;UBERON:0003056!1.87e-23!49;UBERON:0003080!1.80e-20!40;UBERON:0002780!9.50e-20!39;UBERON:0001890!9.50e-20!39;UBERON:0006240!9.50e-20!39;UBERON:0002020!4.98e-18!34;UBERON:0002791!1.19e-15!29;UBERON:0003528!1.19e-15!29;UBERON:0001893!1.19e-15!29;UBERON:0007811!2.13e-12!86;UBERON:0000956!5.26e-11!21;UBERON:0001869!5.26e-11!21;UBERON:0000203!5.26e-11!21;UBERON:0000153!5.98e-10!94;UBERON:0002619!4.03e-09!17;UBERON:0000468!4.13e-08!333;UBERON:0002021!1.79e-07!10;UBERON:0000411!1.79e-07!10;UBERON:0001950!1.79e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.08e-36,75;UBERON:0001017,5.28e-36,73;UBERON:0002346,1.46e-33,64;UBERON:0003075,1.46e-33,64;UBERON:0007284,1.46e-33,64;UBERON:0004121,9.32e-32,95;UBERON:0000924,9.32e-32,95;UBERON:0006601,9.32e-32,95;UBERON:0000073,8.09e-30,54;UBERON:0001049,2.94e-28,52;UBERON:0005068,2.94e-28,52;UBERON:0006241,2.94e-28,52;UBERON:0007135,2.94e-28,52;UBERON:0010371,3.53e-27,73;UBERON:0003056,2.17e-25,49;UBERON:0000955,3.41e-25,47;UBERON:0006238,3.41e-25,47;UBERON:0002616,1.73e-24,46;UBERON:0010314,4.36e-22,92;UBERON:0003080,4.55e-22,40;UBERON:0002780,2.87e-21,39;UBERON:0001890,2.87e-21,39;UBERON:0006240,2.87e-21,39;UBERON:0002020,2.36e-19,34;UBERON:0003528,1.03e-16,29;UBERON:0002791,1.03e-16,29;UBERON:0001893,1.03e-16,29;UBERON:0000956,1.40e-11,21;UBERON:0001869,1.40e-11,21;UBERON:0000203,1.40e-11,21;UBERON:0002619,1.71e-09,17;UBERON:0002021,3.97e-08,10;UBERON:0000411,3.97e-08,10;UBERON:0001950,3.97e-08,10
|phase1_expression=3.20297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99406927420056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,2.53442328048786,3.48738829107195,1.56478268869608,1.09012578190223,0.439372365468944,2.13872888981712,0.279972843250725,0,0,0,0,0,1.71920063963254,1.03134418455488,19.624696703381,28.0365219014177,21.5502677192101,0,0,0,0,0,1.19840044207362,2.30530983192933,18.9751990524514,16.3357185381346,14.9330722559481,14.8538511889978,14.7981922437581,31.847607795888,14.185129710699,22.0612508786405,40.7428759697738,41.3706975396008,39.3232725135983,31.5208227675163,21.5910838901687,40.1103295328705,29.314214895145,34.8912818219642,30.4068513075852,21.5078867395777,30.1827963294098,18.0807462450542,1.96888102666279,3.85414956544606,0.579728977403356,0,0,0,0,0,1.96622188184453,0.170430322578058,0.259786004602869,0,3.38024207464033,0,0,0,0,0,0,1.1418387971906,0.258937883647172,5.19547486726887,7.98032503124225,7.00270600117925,5.76538743140146,7.38540938707851,7.2904998424137,1.13099932196708,0,0.289198713839823,0,0,0,0.484875253135222,0,24.0080253549469,30.9981126083913,0.510914110417183,0,0,0,42.5405415909696,37.972550033946,28.2722292253945,37.8937018019163,40.6587577155226,48.4146143823775,48.8346201833951,0.407357455401265,0,0.505445516867349,5.6819301089348,5.59517904739626,7.81667155073808,9.18316862007281,10.8507468841715,9.32100038373192,16.2704424761759,15.9292931751539,25.6116337031625,0,0.378212160335639,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0,0.710234206755631,0.196764231747404,0.462801338662135,0,0.804820204198858,0.467061369468678,0.329119699826961,0.492502392237286,0.891756905004413,0.438599962275997,0.658650345873152,1.07365135008297,37.2213208958505,23.7709654596147,0,0.264450566663544,2.55945900642281,2.55460339046482,3.22168653305233,2.21851877085677,2.00140239460383,2.28270751335071,0.474529061544512,1.4822905925161,1.75934646160189,0.596869416123452,1.55971269695296,0,0.432276099749388,0.398282546508734,0.948339504765408,3.31320686568214,3.38123207019241,2.64746726198909,1.55161989734101,2.38461787627083,13.3429093332183,10.775540802511,11.7749045881031,11.9695249004147,0,0.166845105716094,0.196558995113203,0,0.405720242777006,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0,1.32643988239339,1.30371981153621,0,0,0,0.238043640886014,0,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0.275936746304732,61.8119771452999,56.9648796838107,0,0.757412781613119,9.78075480190396,18.7410597262386,18.7418356027535,14.5770966751057,10.6943363559549,9.34152551603147,12.5491317519217,21.0424217696145,20.9502522311657,30.5255250600717,4.5420827266646,1.24645922567079,0.81443479676788,2.8044920905331,1.32745138339963,0.728341908464944,1.209294227859,1.32023555829129,0.885905678642318,3.68922177532713,2.32585463851399,3.27180356529755,3.56497378384721,1.26414703174326,0,0,44.5975883537462,10.443543453816,3.75140182969988,5.78709994585299,11.8817956540323,9.98865378571595,15.1385098953951,9.74287837166718,0,0,4.19003956304428,0.49465875882444,0,0.180938774784468,0.238744688006273,0.328281799490123,0,71.5741665760567,0,0,0,0.188368457004691,0,0,0,0,0,1.90934123603023,2.53068794864908,2.84647253977588,2.80813886136683,2.29997125615916,1.9652630737156,2.29269388854195,1.48776220305605,1.04702376793612,1.16653475962614,0.621339313086926,0.56369293868419,0.897099276263873,0.330916980914195,1.16670713006429,0.387479470433193,1.01373675294467,1.76035857968631,1.8228613878153,2.30690557736564,0.241584120826006,0,0,0,0.102710957164827,0,0.358053391334963,0.198681354781265,0,0.295379054349154,0.201932899896295,0,0.201652370273681,0.0974578807397524,0,0,0.226730383615211,0,0,0,1.54551675225752,0.93841237725591,3.47988086107804,1.07184189539533,0.501572104035363,40.6621326684288,50.6357760157895,40.1026859407578,57.0552565381043,23.9778881919725,30.215755895588,30.3760125104313,37.3766598676103,40.7828168085784,26.4057758993428,9.54843597774425,11.9707462020309,9.04888110496911,5.10524105843418,8.17491334249131,8.64064489715066,7.3341420174533,6.79915688888351,5.13470735346904,6.82282471762253,8.61829619626815,7.9223063382152,6.64854703036165,6.40251524048693,7.69635284005218,7.1444053692461,6.2577536010222,6.94473193669338,9.47797571847605,8.09594060739185,8.22886205724997,6.92155644021416,6.43777712857767,7.41266724824875,6.58765662907314,7.1922416707925,8.23175877927476,9.2074399003245,6.65440157844723,9.53941861818155,5.69448086996036,5.51625101303155,7.36615877705441,8.05671574167023,4.43685205256625,9.49280196164194,4.44470056046276,3.86767897286937,1.53030665655075,2.20591419119516,3.47801753430632
|phase1_expression=3.20297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99406927420056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,2.53442328048786,3.48738829107195,1.56478268869608,1.09012578190223,0.439372365468944,2.13872888981712,0.279972843250725,0,0,0,0,0,1.71920063963254,1.03134418455488,19.624696703381,28.0365219014177,21.5502677192101,0,0,0,0,0,1.19840044207362,2.30530983192933,18.9751990524514,16.3357185381346,14.9330722559481,14.8538511889978,14.7981922437581,31.847607795888,14.185129710699,22.0612508786405,40.7428759697738,41.3706975396008,39.3232725135983,31.5208227675163,21.5910838901687,40.1103295328705,29.314214895145,34.8912818219642,30.4068513075852,21.5078867395777,30.1827963294098,18.0807462450542,1.96888102666279,3.85414956544606,0.579728977403356,0,0,0,0,0,1.96622188184453,0.170430322578058,0.259786004602869,0,3.38024207464033,0,0,0,0,0,0,1.1418387971906,0.258937883647172,5.19547486726887,7.98032503124225,7.00270600117925,5.76538743140146,7.38540938707851,7.2904998424137,1.13099932196708,0,0.289198713839823,0,0,0,0.484875253135222,0,24.0080253549469,30.9981126083913,0.510914110417183,0,0,0,42.5405415909696,37.972550033946,28.2722292253945,37.8937018019163,40.6587577155226,48.4146143823775,48.8346201833951,0.407357455401265,0,0.505445516867349,5.6819301089348,5.59517904739626,7.81667155073808,9.18316862007281,10.8507468841715,9.32100038373192,16.2704424761759,15.9292931751539,25.6116337031625,0,0.378212160335639,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0,0.710234206755631,0.196764231747404,0.462801338662135,0,0.804820204198858,0.467061369468678,0.329119699826961,0.492502392237286,0.891756905004413,0.438599962275997,0.658650345873152,1.07365135008297,37.2213208958505,23.7709654596147,0,0.264450566663544,2.55945900642281,2.55460339046482,3.22168653305233,2.21851877085677,2.00140239460383,2.28270751335071,0.474529061544512,1.4822905925161,1.75934646160189,0.596869416123452,1.55971269695296,0,0.432276099749388,0.398282546508734,0.948339504765408,3.31320686568214,3.38123207019241,2.64746726198909,1.55161989734101,2.38461787627083,13.3429093332183,10.775540802511,11.7749045881031,11.9695249004147,0,0.166845105716094,0.196558995113203,0,0.405720242777006,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0,1.32643988239339,1.30371981153621,0,0,0,0.238043640886014,0,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0.275936746304732,61.8119771452999,56.9648796838107,0,0.757412781613119,9.78075480190396,18.7410597262386,18.7418356027535,14.5770966751057,10.6943363559549,9.34152551603147,12.5491317519217,21.0424217696145,20.9502522311657,30.5255250600717,4.5420827266646,1.24645922567079,0.81443479676788,2.8044920905331,1.32745138339963,0.728341908464944,1.209294227859,1.32023555829129,0.885905678642318,3.68922177532713,2.32585463851399,3.27180356529755,3.56497378384721,1.26414703174326,0,0,44.5975883537462,10.443543453816,3.75140182969988,5.78709994585299,11.8817956540323,9.98865378571595,15.1385098953951,9.74287837166718,0,0,4.19003956304428,0.49465875882444,0,0.180938774784468,0.238744688006273,0.328281799490123,0,71.5741665760567,0,0,0,0.188368457004691,0,0,0,0,0,1.90934123603023,2.53068794864908,2.84647253977588,2.80813886136683,2.29997125615916,1.9652630737156,2.29269388854195,1.48776220305605,1.04702376793612,1.16653475962614,0.621339313086926,0.56369293868419,0.897099276263873,0.330916980914195,1.16670713006429,0.387479470433193,1.01373675294467,1.76035857968631,1.8228613878153,2.30690557736564,0.241584120826006,0,0,0,0.102710957164827,0,0.358053391334963,0.198681354781265,0,0.295379054349154,0.201932899896295,0,0.201652370273681,0.0974578807397524,0,0,0.226730383615211,0,0,0,1.54551675225752,0.93841237725591,3.47988086107804,1.07184189539533,0.501572104035363,40.6621326684288,50.6357760157895,40.1026859407578,57.0552565381043,23.9778881919725,30.215755895588,30.3760125104313,37.3766598676103,40.7828168085784,26.4057758993428,9.54843597774425,11.9707462020309,9.04888110496911,5.10524105843418,8.17491334249131,8.64064489715066,7.3341420174533,6.79915688888351,5.13470735346904,6.82282471762253,8.61829619626815,7.9223063382152,6.64854703036165,6.40251524048693,7.69635284005218,7.1444053692461,6.2577536010222,6.94473193669338,9.47797571847605,8.09594060739185,8.22886205724997,6.92155644021416,6.43777712857767,7.41266724824875,6.58765662907314,7.1922416707925,8.23175877927476,9.2074399003245,6.65440157844723,9.53941861818155,5.69448086996036,5.51625101303155,7.36615877705441,8.05671574167023,4.43685205256625,9.49280196164194,4.44470056046276,3.86767897286937,1.53030665655075,2.20591419119516,3.47801753430632
|short_description=p3@Rufy3
}}
}}

Latest revision as of 07:30, 26 September 2015

Short description:p3@Rufy3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rufy3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -28bp_to_uc008xzy.1_5end
EntrezGene:Rufy3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rufy3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.53
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.49
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C319.62
Mouse Granule cells, donor2.CNhs12357.11731-123E328.04
Mouse Granule cells, donor3.CNhs12108.11636-122C721.55
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D518.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F516.34
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.93
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.80
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D231.85
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.06
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D340.74
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F341.37
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D739.32
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D431.52
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D840.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E429.31
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E534.89
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I630.41
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D621.51
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F630.18
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.08
Mouse Schwann, donor1.CNhs12507.11728-123D91.97
Mouse Schwann, donor2.CNhs12573.11746-123F93.85
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.38
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D75.20
adrenal gland, embryo E14.CNhs11038.406-44C57.98
adrenal gland, embryo E16.CNhs11004.1254-43D67.00
adrenal gland, embryo E17.CNhs11043.1263-45I15.77
adrenal gland, embryo E18.CNhs11026.1262-18F57.39
adrenal gland, neonate N00.CNhs11191.1311-23C17.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B224.01
cerebellum, neonate N30.CNhs11135.1395-42I231.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A442.54
corpus striatum, adult.CNhs10487.19-21D837.97
corpus striatum, neonate N00.CNhs11226.630-43F128.27
cortex, adult.CNhs10473.12-14D537.89
cortex, neonate N30.CNhs11107.1392-42F240.66
diencephalon, adult.CNhs10482.20-12F248.41
diencephalon, neonate N30.CNhs11201.1388-42B248.83
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G45.68
eyeball, embryo E12.CNhs11016.345-16C65.60
eyeball, embryo E14.CNhs10521.399-16E27.82
eyeball, embryo E15.CNhs10593.426-16C99.18
eyeball, embryo E17.CNhs11023.1261-18D410.85
eyeball, neonate N00.CNhs11207.633-15C69.32
eyeball, neonate N01.CNhs11140.1532-43E716.27
eyeball, neonate N02.CNhs11205.1551-44G815.93
eyeball, neonate N16.CNhs11188.777-19A225.61
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E837.22
hippocampus, neonate N00.CNhs11228.627-43G123.77
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D83.22
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F83.31
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G72.38
kidney, neonate N10.CNhs11206.758-6D513.34
kidney, neonate N20.CNhs11113.832-19I110.78
kidney, neonate N25.CNhs11122.1353-25F311.77
kidney, neonate N30.CNhs11203.1385-42H111.97
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C261.81
medulla oblongata, neonate N30.CNhs11200.1396-42A356.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E19.78
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E218.74
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D714.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.69
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.34
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.55
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.04
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D620.95
olfactory brain, adult.CNhs10489.18-22I930.53
ovary, adult.CNhs10507.91-2I74.54
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G844.60
pituitary gland, embryo E12.CNhs11018.346-16E610.44
pituitary gland, embryo E13.CNhs11009.370-44C73.75
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B911.88
pituitary gland, embryo E16.CNhs11036.449-43F69.99
pituitary gland, embryo E17.CNhs11039.1265-44F515.14
pituitary gland, neonate N00.CNhs11190.1308-22E99.74
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C971.57
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D42.81
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D92.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A140.66
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A250.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A340.10
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D757.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.98
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A530.22
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A630.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A737.38
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A840.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A926.41
whole body, embryo E11.CNhs11014.324-5I89.55
whole body, embryo E12.CNhs10587.857-27C911.97
whole body, embryo E13.CNhs10512.372-23H29.05
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B18.17
whole body, embryo E16.CNhs10514.453-14F28.64
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.62
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.92
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.26
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.94
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.41
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.19
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.65
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.69
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.06
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I59.49
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C23.87
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.90e-1833
neuronal stem cell2.90e-1833
neuroblast2.90e-1833
electrically signaling cell2.90e-1833
electrically responsive cell1.31e-1639
electrically active cell1.31e-1639
ectodermal cell1.16e-1444
neurectodermal cell1.16e-1444
neural cell1.34e-1443
CNS neuron (sensu Vertebrata)2.54e-1423
neuroblast (sensu Vertebrata)2.54e-1423

Uber anatomy
Ontology termp-valuen
nervous system5.08e-3675
central nervous system5.28e-3673
neurectoderm1.46e-3364
neural plate1.46e-3364
presumptive neural plate1.46e-3364
ectoderm-derived structure9.32e-3295
ectoderm9.32e-3295
presumptive ectoderm9.32e-3295
regional part of nervous system8.09e-3054
neural tube2.94e-2852
neural rod2.94e-2852
future spinal cord2.94e-2852
neural keel2.94e-2852
ecto-epithelium3.53e-2773
pre-chordal neural plate2.17e-2549
brain3.41e-2547
future brain3.41e-2547
regional part of brain1.73e-2446
structure with developmental contribution from neural crest4.36e-2292
anterior neural tube4.55e-2240
regional part of forebrain2.87e-2139
forebrain2.87e-2139
future forebrain2.87e-2139
gray matter2.36e-1934
brain grey matter1.03e-1629
regional part of telencephalon1.03e-1629
telencephalon1.03e-1629
cerebral cortex1.40e-1121
cerebral hemisphere1.40e-1121
pallium1.40e-1121
regional part of cerebral cortex1.71e-0917
occipital lobe3.97e-0810
visual cortex3.97e-0810
neocortex3.97e-0810
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