Personal tools

FFCP PHASE1:Mm9::chr4:123204925..123204955,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=11426
|EntrezGene=11426
|HGNC=
|HGNC=
|MCL_coexpression_id=121
|TSSclassifier=NA
|UniProt=F6SHS0
|UniProt=F6SHS0
|association_with_transcript=-34bp_to_ENSMUST00000147228_5end
|association_with_transcript=-34bp_to_ENSMUST00000147228_5end
|cluster_id=chr4:123204925..123204955,-
|description=CAGE_peak_4_at_Macf1_5end
|description=CAGE_peak_4_at_Macf1_5end
|id=chr4:123204925..123204955,-
|id=chr4:123204925..123204955,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!6.46e-13!71;UBERON:0003075!6.46e-13!71;UBERON:0007284!6.46e-13!71;UBERON:0000033!2.66e-12!63;UBERON:0004121!3.61e-12!102;UBERON:0000924!3.61e-12!102;UBERON:0006601!3.61e-12!102;UBERON:0001017!1.13e-11!73;UBERON:0005743!1.13e-11!73;UBERON:0001049!1.89e-11!52;UBERON:0005068!1.89e-11!52;UBERON:0006241!1.89e-11!52;UBERON:0007135!1.89e-11!52;UBERON:0000073!3.09e-11!75;UBERON:0001016!3.09e-11!75;UBERON:0000955!8.22e-11!50;UBERON:0006238!8.22e-11!50;UBERON:0002616!2.92e-10!49;UBERON:0003056!1.68e-09!49;UBERON:0000468!3.85e-09!333;UBERON:0003080!2.57e-07!40;UBERON:0002020!8.15e-07!34;UBERON:0002780!8.53e-07!39;UBERON:0001890!8.53e-07!39;UBERON:0006240!8.53e-07!39;UBERON:0000922!8.59e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.37e-16,54;UBERON:0002346,1.44e-16,64;UBERON:0003075,1.44e-16,64;UBERON:0007284,1.44e-16,64;UBERON:0010371,2.94e-16,73;UBERON:0001049,6.10e-15,52;UBERON:0005068,6.10e-15,52;UBERON:0006241,6.10e-15,52;UBERON:0007135,6.10e-15,52;UBERON:0004121,3.66e-14,95;UBERON:0000924,3.66e-14,95;UBERON:0006601,3.66e-14,95;UBERON:0001017,2.94e-13,73;UBERON:0001016,1.78e-12,75;UBERON:0000955,9.01e-12,47;UBERON:0006238,9.01e-12,47;UBERON:0003056,2.91e-11,49;UBERON:0002616,4.59e-11,46;UBERON:0002020,1.02e-09,34;UBERON:0003080,4.42e-09,40;UBERON:0002780,2.21e-08,39;UBERON:0001890,2.21e-08,39;UBERON:0006240,2.21e-08,39;UBERON:0010314,2.56e-08,92;UBERON:0003076,1.91e-07,12;UBERON:0003057,1.91e-07,12;UBERON:0002021,5.82e-07,10;UBERON:0000411,5.82e-07,10;UBERON:0001950,5.82e-07,10;UBERON:0003528,8.13e-07,29;UBERON:0002791,8.13e-07,29;UBERON:0001893,8.13e-07,29
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.912392380975631,0.367093504323363,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,0.809265843438391,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0,0,3.71346279724945,5.74258206474195,0.244981598429908,0.0958454710182364,0,14.3150645299205,16.2162919368188,17.8183578577242,0.791317726381163,1.09785172322892,2.6045668527838,7.81712397203867,9.56696437053856,11.0014738399303,9.42811473515737,6.40672563595963,2.42319279572891,0.075726193333184,0.453429360640713,0.579728977403356,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.593768556259299,0.693941307064543,0.304465478312141,0.461230994512117,0.301445281105245,1.17588707135705,0.376999773989026,0,0.144599356919912,0,0.323533699894818,0,0,3.72783522436244,26.0574909340277,30.369772487951,1.27728527604296,0,0,0,18.2744580073884,5.94750783664214,3.76963056338593,7.12679712788333,9.2057564638919,15.3763152974074,15.412919991437,2.95334155165917,1.61729061793121,0.758168275301024,5.26104639716185,1.04096354370163,1.14951052216736,0.360124259610698,0.90422890701429,3.40182495756639,4.61209393025459,1.68663104207512,6.98499100995342,0,0,0.175951124163949,0,1.11218899690239,0.348252166522167,1.02891068203972,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.23674473558521,0.590292695242212,0,0,0.536546802799238,0.233530684734339,0,0.656669856316381,0.56748166682099,0.877199924551994,0.219550115291051,0.268412837520744,3.99550902271842,1.13195073617213,0.330418782983798,0.264450566663544,1.06644125267617,1.16118335930219,0.77320476793256,1.4117846723634,1.11189021922435,1.52180500890047,3.79623249235609,2.63518327558417,4.02136334080431,5.17286827306992,4.48417400373976,3.59527763461689,1.29682829924817,2.98711909881551,0.189667900953082,1.02823661348756,0,0.407302655690628,0.387904974335251,0.771494018793504,1.26473074248515,0.885660887877613,1.09899109488962,0.370191491765402,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0.936113019343682,0.252578877947112,0.179397413521912,0,0.923765950833023,1.89491411770485,0.977789858652155,2.03694102930226,0.704070744865506,1.67506257441816,0.476087281772027,1.75620283072019,3.31033802623001,6.64394068946325,2.23236676120482,0.81931657357869,0.863424909329478,0.867894351489069,0,0,0,0,17.0183625387059,21.918585392742,0,0,0.315508219416257,0.390438744296638,1.29254038639679,0.238968797952552,0.445597348164788,0,1.61924280669958,0.876767573733936,0.790575555893047,10.2822821254978,1.13552068166615,1.24645922567079,2.28041743095006,2.63952196756057,0,0.728341908464944,0,0.377210159511796,0.295301892880773,0.307435147943927,0.516856586336442,0.727067458955011,1.06949213515416,0.948110273807448,0,0,4.42571487479924,1.62054984628179,1.03486947026204,0.428674070063185,0.709360934569094,1.60531935841864,1.15184314421485,0.913394847343798,0,0.21183207086382,0.441056796109924,0.49465875882444,1.77610869365496,0.904693873922338,4.65552141612232,5.74493149107714,3.49777003955821,13.5360470467672,0,1.65109494370578,0.370389054739423,0.753473828018764,0.136694227721025,0,0,0,0,0.954670618015114,0.949007980743406,0.813277868507395,2.91614420218863,3.97267762427491,3.9305261474312,5.93403124093211,6.19900917940019,4.4498510137285,2.98114438571124,0,0,0.299033092087958,0.496375471371293,0.583353565032143,0.516639293910924,0.506868376472335,0.938857909166032,0.911430693907651,0,0,0.288030006257865,0.316011120628178,0.608175645870493,0.410843828659309,0,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0,0,0.0962118416403295,0,1.13365191807606,0,0,0,3.28422309854724,2.064507229963,1.83151624267265,0.643105137237198,1.00314420807073,3.95326289831947,2.30162618253588,2.86447756719698,1.71853182343688,1.37016503954128,9.06472676867641,8.77529250301348,2.2516060161211,4.53142408984205,2.5888015587591,0.103787347584177,0.798049746802062,0.170733605754134,0.729320151204882,0.419226325255965,0.735374033800057,1.33348036680969,0.618105171716683,1.92551525755089,1.76888048234658,1.2673964994512,1.32038438970253,0.561849044819294,1.15245274328765,0.861532034334199,0,0.579421629724277,0.964546102318525,0.824171801606613,1.32479028120958,1.71434626192708,1.59728225543404,2.38436189947321,1.30811774969096,1.41164070622996,0.676916863133412,0.548783918618318,1.31534855718921,1.35804113845862,2.80571135828869,0.711810108745045,1.0835493061312,1.22769312950907,2.16911577660352,1.54325288784913,0.749431733813838,1.16965804222704,1.71896843238639,0.382576664137687,0.882365676478062,0.695603506861264
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.912392380975631,0.367093504323363,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,0.809265843438391,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0,0,3.71346279724945,5.74258206474195,0.244981598429908,0.0958454710182364,0,14.3150645299205,16.2162919368188,17.8183578577242,0.791317726381163,1.09785172322892,2.6045668527838,7.81712397203867,9.56696437053856,11.0014738399303,9.42811473515737,6.40672563595963,2.42319279572891,0.075726193333184,0.453429360640713,0.579728977403356,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.593768556259299,0.693941307064543,0.304465478312141,0.461230994512117,0.301445281105245,1.17588707135705,0.376999773989026,0,0.144599356919912,0,0.323533699894818,0,0,3.72783522436244,26.0574909340277,30.369772487951,1.27728527604296,0,0,0,18.2744580073884,5.94750783664214,3.76963056338593,7.12679712788333,9.2057564638919,15.3763152974074,15.412919991437,2.95334155165917,1.61729061793121,0.758168275301024,5.26104639716185,1.04096354370163,1.14951052216736,0.360124259610698,0.90422890701429,3.40182495756639,4.61209393025459,1.68663104207512,6.98499100995342,0,0,0.175951124163949,0,1.11218899690239,0.348252166522167,1.02891068203972,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.23674473558521,0.590292695242212,0,0,0.536546802799238,0.233530684734339,0,0.656669856316381,0.56748166682099,0.877199924551994,0.219550115291051,0.268412837520744,3.99550902271842,1.13195073617213,0.330418782983798,0.264450566663544,1.06644125267617,1.16118335930219,0.77320476793256,1.4117846723634,1.11189021922435,1.52180500890047,3.79623249235609,2.63518327558417,4.02136334080431,5.17286827306992,4.48417400373976,3.59527763461689,1.29682829924817,2.98711909881551,0.189667900953082,1.02823661348756,0,0.407302655690628,0.387904974335251,0.771494018793504,1.26473074248515,0.885660887877613,1.09899109488962,0.370191491765402,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0.936113019343682,0.252578877947112,0.179397413521912,0,0.923765950833023,1.89491411770485,0.977789858652155,2.03694102930226,0.704070744865506,1.67506257441816,0.476087281772027,1.75620283072019,3.31033802623001,6.64394068946325,2.23236676120482,0.81931657357869,0.863424909329478,0.867894351489069,0,0,0,0,17.0183625387059,21.918585392742,0,0,0.315508219416257,0.390438744296638,1.29254038639679,0.238968797952552,0.445597348164788,0,1.61924280669958,0.876767573733936,0.790575555893047,10.2822821254978,1.13552068166615,1.24645922567079,2.28041743095006,2.63952196756057,0,0.728341908464944,0,0.377210159511796,0.295301892880773,0.307435147943927,0.516856586336442,0.727067458955011,1.06949213515416,0.948110273807448,0,0,4.42571487479924,1.62054984628179,1.03486947026204,0.428674070063185,0.709360934569094,1.60531935841864,1.15184314421485,0.913394847343798,0,0.21183207086382,0.441056796109924,0.49465875882444,1.77610869365496,0.904693873922338,4.65552141612232,5.74493149107714,3.49777003955821,13.5360470467672,0,1.65109494370578,0.370389054739423,0.753473828018764,0.136694227721025,0,0,0,0,0.954670618015114,0.949007980743406,0.813277868507395,2.91614420218863,3.97267762427491,3.9305261474312,5.93403124093211,6.19900917940019,4.4498510137285,2.98114438571124,0,0,0.299033092087958,0.496375471371293,0.583353565032143,0.516639293910924,0.506868376472335,0.938857909166032,0.911430693907651,0,0,0.288030006257865,0.316011120628178,0.608175645870493,0.410843828659309,0,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0,0,0.0962118416403295,0,1.13365191807606,0,0,0,3.28422309854724,2.064507229963,1.83151624267265,0.643105137237198,1.00314420807073,3.95326289831947,2.30162618253588,2.86447756719698,1.71853182343688,1.37016503954128,9.06472676867641,8.77529250301348,2.2516060161211,4.53142408984205,2.5888015587591,0.103787347584177,0.798049746802062,0.170733605754134,0.729320151204882,0.419226325255965,0.735374033800057,1.33348036680969,0.618105171716683,1.92551525755089,1.76888048234658,1.2673964994512,1.32038438970253,0.561849044819294,1.15245274328765,0.861532034334199,0,0.579421629724277,0.964546102318525,0.824171801606613,1.32479028120958,1.71434626192708,1.59728225543404,2.38436189947321,1.30811774969096,1.41164070622996,0.676916863133412,0.548783918618318,1.31534855718921,1.35804113845862,2.80571135828869,0.711810108745045,1.0835493061312,1.22769312950907,2.16911577660352,1.54325288784913,0.749431733813838,1.16965804222704,1.71896843238639,0.382576664137687,0.882365676478062,0.695603506861264
|short_description=p4@Macf1
|short_description=p4@Macf1
}}
}}

Latest revision as of 07:31, 26 September 2015

Short description:p4@Macf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Macf1_5end
Coexpression cluster:MCL_coexpression_mm9:121
Association with transcript: -34bp_to_ENSMUST00000147228_5end
EntrezGene:Macf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Macf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.22
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.43
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B226.06
cerebellum, neonate N30.CNhs11135.1395-42I230.37
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A418.27
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F13.77
cortex, adult.CNhs10473.12-14D57.13
cortex, neonate N30.CNhs11107.1392-42F29.21
diencephalon, adult.CNhs10482.20-12F215.38
diencephalon, neonate N30.CNhs11201.1388-42B215.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G45.26
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C63.40
eyeball, neonate N01.CNhs11140.1532-43E74.61
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A26.98
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E92.64
intestine, neonate N06.CNhs11102.688-20B84.02
intestine, neonate N07.CNhs11095.720-20F25.17
intestine, neonate N10.CNhs11098.755-23A54.48
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G12.99
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E53.31
lung, neonate N07.CNhs11111.715-19A36.64
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C217.02
medulla oblongata, neonate N30.CNhs11200.1396-42A321.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I910.28
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I54.66
skin, neonate N10.CNhs11108.762-6C45.74
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C913.54
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D42.92
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C63.93
stomach, neonate N03.CNhs11193.1340-24B85.93
stomach, neonate N07.CNhs11210.718-18A96.20
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I12.98
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.28
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.37e-1654
neurectoderm1.44e-1664
neural plate1.44e-1664
presumptive neural plate1.44e-1664
ecto-epithelium2.94e-1673
neural tube6.10e-1552
neural rod6.10e-1552
future spinal cord6.10e-1552
neural keel6.10e-1552
ectoderm-derived structure3.66e-1495
ectoderm3.66e-1495
presumptive ectoderm3.66e-1495
central nervous system2.94e-1373
nervous system1.78e-1275
brain9.01e-1247
future brain9.01e-1247
pre-chordal neural plate2.91e-1149
regional part of brain4.59e-1146
gray matter1.02e-0934
anterior neural tube4.42e-0940
regional part of forebrain2.21e-0839
forebrain2.21e-0839
future forebrain2.21e-0839
structure with developmental contribution from neural crest2.56e-0892
posterior neural tube1.91e-0712
chordal neural plate1.91e-0712
occipital lobe5.82e-0710
visual cortex5.82e-0710
neocortex5.82e-0710
brain grey matter8.13e-0729
regional part of telencephalon8.13e-0729
telencephalon8.13e-0729
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:123204925..123204955,-&oldid=4241035"