FFCP PHASE1:Mm9::chr2:180773937..180773987,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11438 | |EntrezGene=11438 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=159 | |MCL_coexpression_id=159 | ||
|TSSclassifier=NA | |||
|UniProt=E0CZ39 | |UniProt=E0CZ39 | ||
|association_with_transcript=-7bp_to_ENSMUST00000135766_5end | |association_with_transcript=-7bp_to_ENSMUST00000135766_5end | ||
|cluster_id=chr2:180773937..180773987,- | |||
|description=CAGE_peak_1_at_Chrna4_5end | |description=CAGE_peak_1_at_Chrna4_5end | ||
|id=chr2:180773937..180773987,- | |id=chr2:180773937..180773987,- | ||
|ontology_enrichment_celltype=CL:0000540!1.85e-15!33;CL:0000047!1.85e-15!33;CL:0000031!1.85e-15!33;CL:0000404!1.85e-15!33;CL:0000221!1.12e-14!44;CL:0000133!1.12e-14!44;CL:0002319!1.17e-14!43;CL:0000117!3.12e-12!23;CL:0000337!3.12e-12!23;CL:0000393!2.10e-10!39;CL:0000211!2.10e-10!39;CL:0000055!7.25e-10!50 | |ontology_enrichment_celltype=CL:0000540!1.85e-15!33;CL:0000047!1.85e-15!33;CL:0000031!1.85e-15!33;CL:0000404!1.85e-15!33;CL:0000221!1.12e-14!44;CL:0000133!1.12e-14!44;CL:0002319!1.17e-14!43;CL:0000117!3.12e-12!23;CL:0000337!3.12e-12!23;CL:0000393!2.10e-10!39;CL:0000211!2.10e-10!39;CL:0000055!7.25e-10!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.31e-17,33;CL:0000047,2.31e-17,33;CL:0000031,2.31e-17,33;CL:0000404,2.31e-17,33;CL:0002319,3.58e-16,43;CL:0000221,1.69e-15,44;CL:0000133,1.69e-15,44;CL:0000117,1.11e-13,23;CL:0000337,1.11e-13,23;CL:0000393,6.98e-13,39;CL:0000211,6.98e-13,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.72e-29!102;UBERON:0000924!1.72e-29!102;UBERON:0006601!1.72e-29!102;UBERON:0001017!7.92e-28!73;UBERON:0005743!7.92e-28!73;UBERON:0000073!5.58e-27!75;UBERON:0001016!5.58e-27!75;UBERON:0002346!1.74e-24!71;UBERON:0003075!1.74e-24!71;UBERON:0007284!1.74e-24!71;UBERON:0000033!1.26e-18!63;UBERON:0001049!1.68e-17!52;UBERON:0005068!1.68e-17!52;UBERON:0006241!1.68e-17!52;UBERON:0007135!1.68e-17!52;UBERON:0003056!8.39e-17!49;UBERON:0002616!1.09e-15!49;UBERON:0000955!1.18e-15!50;UBERON:0006238!1.18e-15!50;UBERON:0002020!4.85e-14!34;UBERON:0003080!8.22e-13!40;UBERON:0002780!3.29e-12!39;UBERON:0001890!3.29e-12!39;UBERON:0006240!3.29e-12!39;UBERON:0002791!9.08e-11!29;UBERON:0003528!9.08e-11!29;UBERON:0001893!9.08e-11!29;UBERON:0007811!9.43e-09!86;UBERON:0000153!5.26e-08!94;UBERON:0002021!8.87e-07!10;UBERON:0000411!8.87e-07!10;UBERON:0001950!8.87e-07!10 | |ontology_enrichment_uberon=UBERON:0004121!1.72e-29!102;UBERON:0000924!1.72e-29!102;UBERON:0006601!1.72e-29!102;UBERON:0001017!7.92e-28!73;UBERON:0005743!7.92e-28!73;UBERON:0000073!5.58e-27!75;UBERON:0001016!5.58e-27!75;UBERON:0002346!1.74e-24!71;UBERON:0003075!1.74e-24!71;UBERON:0007284!1.74e-24!71;UBERON:0000033!1.26e-18!63;UBERON:0001049!1.68e-17!52;UBERON:0005068!1.68e-17!52;UBERON:0006241!1.68e-17!52;UBERON:0007135!1.68e-17!52;UBERON:0003056!8.39e-17!49;UBERON:0002616!1.09e-15!49;UBERON:0000955!1.18e-15!50;UBERON:0006238!1.18e-15!50;UBERON:0002020!4.85e-14!34;UBERON:0003080!8.22e-13!40;UBERON:0002780!3.29e-12!39;UBERON:0001890!3.29e-12!39;UBERON:0006240!3.29e-12!39;UBERON:0002791!9.08e-11!29;UBERON:0003528!9.08e-11!29;UBERON:0001893!9.08e-11!29;UBERON:0007811!9.43e-09!86;UBERON:0000153!5.26e-08!94;UBERON:0002021!8.87e-07!10;UBERON:0000411!8.87e-07!10;UBERON:0001950!8.87e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.20e-28,73;UBERON:0001016,2.97e-27,75;UBERON:0004121,1.22e-26,95;UBERON:0000924,1.22e-26,95;UBERON:0006601,1.22e-26,95;UBERON:0002346,1.01e-23,64;UBERON:0003075,1.01e-23,64;UBERON:0007284,1.01e-23,64;UBERON:0010371,2.87e-19,73;UBERON:0000073,4.49e-19,54;UBERON:0001049,3.29e-17,52;UBERON:0005068,3.29e-17,52;UBERON:0006241,3.29e-17,52;UBERON:0007135,3.29e-17,52;UBERON:0003056,1.26e-16,49;UBERON:0002020,7.07e-16,34;UBERON:0010314,3.43e-13,92;UBERON:0002616,1.24e-12,46;UBERON:0003080,2.16e-12,40;UBERON:0000955,4.19e-12,47;UBERON:0006238,4.19e-12,47;UBERON:0003528,8.54e-12,29;UBERON:0002791,8.54e-12,29;UBERON:0001893,8.54e-12,29;UBERON:0002780,1.11e-11,39;UBERON:0001890,1.11e-11,39;UBERON:0006240,1.11e-11,39;UBERON:0002021,2.62e-08,10;UBERON:0000411,2.62e-08,10;UBERON:0001950,2.62e-08,10;UBERON:0002619,7.86e-08,17;UBERON:0002420,2.45e-07,8;UBERON:0007245,2.45e-07,8;UBERON:0010009,2.45e-07,8;UBERON:0010011,2.45e-07,8;UBERON:0000454,2.45e-07,8 | |||
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|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23260375313072,0.439372365468944,0,2.37976916763116,2.87505128729943,0,0,0,0,0,0,20.0293296251002,19.0436752537932,15.8457850876545,0.677689064138264,0,0,0,0,3.29560121570245,3.45796474789399,0.103689612308478,0.270011876663381,0.630974884054146,18.852964970651,12.589506834242,1.34739879136449,1.82106394934649,1.83843757322004,22.0231761998777,28.601963731082,26.5739302533301,21.4974649000216,18.5719916512892,12.5019208933622,19.821992929098,9.00420176050688,14.6686317865738,17.0884579574727,16.657486653495,14.5391567743734,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.845060518660083,0,0,0,0,0,0,1.37020655662872,0,3.41416919849097,1.04091196059682,1.52232739156071,0.691846491768175,1.20578112442098,0.940709657085638,0.753999547978053,0,0,0,0.485300549842228,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,12.1330417917906,5.94750783664214,1.50785222535437,7.82209440865244,7.67146371990992,20.3632283668369,11.6813709408785,1.01839363850316,0.124406970610093,0,0.631325567659422,6.63614259109789,8.73627996847197,8.46292010085141,4.82255417074288,7.34794190834341,4.09963904911519,5.43470002446427,2.32833033665114,0,0.378212160335639,0.527853372491847,0.43839146485515,0.556094498451196,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0,2.73376933133365,1.74937841044784,0,0.264450566663544,0.853153002140936,0.696710015581316,0.257734922644187,0.403367049246685,0,0,0,0,0,0.198956472041151,0,0,0,0,0.569003702859245,1.14248512609729,2.25415471346161,0.610953983535943,1.35766741017338,0.701358198903186,5.50157872981038,6.4948465111025,4.55296310739987,3.08492909804501,0.296452627087149,0,0.196558995113203,0,0.608580364165509,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.509235257325564,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,8.34863067936518,12.5416504653657,0,0.252470927204373,4.41711507182759,6.24701990874622,4.73931475012158,2.15071918157297,1.78238939265915,2.54768877709949,3.64329631507405,2.63030272120181,3.55759000151871,0.642642632843614,2.2710413633323,2.31485284767432,1.14020871547503,0.494910368917606,0,4.61283208694465,2.41858845571801,0.377210159511796,0.590603785761546,1.22974059177571,0,0,1.06949213515416,0,0,0,0.680879211507576,2.16073312837572,1.68166288917581,1.07168517515796,0.177340233642274,1.07021290561242,0.658196082408484,0.608929898229199,0.469343416127421,0.42366414172764,0,0.98931751764888,0,0.361877549568935,0.954978752025092,1.96969079694074,0,12.0526446306831,0,0.206386867963223,0,0,0,0,0,0,0,0,0.790839983952838,1.21991680276109,0.324016022465404,0.209088296014469,0.436725127492355,0.269728692769641,0.247960367176008,0,0,0,0,1.04661582230785,0.827292452285488,0.972255941720238,1.54991788173277,0.337912250981556,1.05621514781179,1.8228613878153,1.67774951081137,0.241584120826006,0.576060012515731,0,1.01362607645082,0.410843828659309,0.25984164595559,0,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,1.33191572024439,0.448569283047378,0.167884616364078,0,0,0.183151624267265,0,0,11.8597886949584,7.82552902062201,10.8850147553485,8.93636548187176,7.53590771747707,2.2661816921691,8.10027000278167,7.20513925158753,6.79713613476307,11.9084871702919,2.38710899443606,7.18244772121856,2.39027048055788,1.94485373654635,2.72497111416377,1.10306105070008,0.222246727801615,1.64828045791115,3.20919209591815,1.76888048234658,2.28131369901216,1.13175804831646,1.591905626988,1.40855335290712,1.83793500657962,0.952587382566147,1.50649623728312,2.89363830695558,2.06042950401653,0.735994600671987,1.02860775715625,1.77475806159337,0.476872379894642,1.0174249164263,1.50575008664529,1.4384483341585,2.0122077016005,0.789209134313529,1.7654534799962,2.24456908663095,2.25406534435931,1.18205378850676,2.45538625901814,1.85924209423159,1.35034627686799,4.24677982494508,1.16965804222704,1.71896843238639,0.57386499620653,1.98532277207564,0 | ||
|short_description=p1@Chrna4 | |short_description=p1@Chrna4 | ||
}} | }} |
Latest revision as of 07:52, 26 September 2015
Short description: | p1@Chrna4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Chrna4_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | -7bp_to_ENSMUST00000135766_5end |
EntrezGene: | Chrna4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.31e-17 | 33 |
neuronal stem cell | 2.31e-17 | 33 |
neuroblast | 2.31e-17 | 33 |
electrically signaling cell | 2.31e-17 | 33 |
neural cell | 3.58e-16 | 43 |
ectodermal cell | 1.69e-15 | 44 |
neurectodermal cell | 1.69e-15 | 44 |
CNS neuron (sensu Vertebrata) | 1.11e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.11e-13 | 23 |
electrically responsive cell | 6.98e-13 | 39 |
electrically active cell | 6.98e-13 | 39 |