FFCP PHASE1:Mm9::chr4:125933470..125933614,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=245877 | |EntrezGene=245877 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1083 | |MCL_coexpression_id=1083 | ||
|TSSclassifier=NA | |||
|UniProt=A2AJI0,A2AJI1,A8Y5P4 | |UniProt=A2AJI0,A2AJI1,A8Y5P4 | ||
|association_with_transcript=0bp_to_ENSMUST00000061143,ENSMUST00000106132,ENSMUST00000122129,ENSMUST00000170140,NM_001145970,NM_144941,uc008usz.2,uc008uta.2,uc008utb.2_5end | |association_with_transcript=0bp_to_ENSMUST00000061143,ENSMUST00000106132,ENSMUST00000122129,ENSMUST00000170140,NM_001145970,NM_144941,uc008usz.2,uc008uta.2,uc008utb.2_5end | ||
|cluster_id=chr4:125933470..125933614,- | |||
|description=CAGE_peak_1_at_Mtap7d1_5end | |description=CAGE_peak_1_at_Mtap7d1_5end | ||
|id=chr4:125933470..125933614,- | |id=chr4:125933470..125933614,- | ||
|ontology_enrichment_celltype=CL:0002319!2.34e-14!43;CL:0000221!1.60e-13!44;CL:0000133!1.60e-13!44;CL:0000055!5.50e-13!50;CL:0000540!2.00e-10!33;CL:0000047!2.00e-10!33;CL:0000031!2.00e-10!33;CL:0000404!2.00e-10!33;CL:0000117!2.70e-10!23;CL:0000337!2.70e-10!23;CL:0000393!8.65e-10!39;CL:0000211!8.65e-10!39;CL:0002321!2.62e-07!70;CL:0000220!2.62e-07!70 | |ontology_enrichment_celltype=CL:0002319!2.34e-14!43;CL:0000221!1.60e-13!44;CL:0000133!1.60e-13!44;CL:0000055!5.50e-13!50;CL:0000540!2.00e-10!33;CL:0000047!2.00e-10!33;CL:0000031!2.00e-10!33;CL:0000404!2.00e-10!33;CL:0000117!2.70e-10!23;CL:0000337!2.70e-10!23;CL:0000393!8.65e-10!39;CL:0000211!8.65e-10!39;CL:0002321!2.62e-07!70;CL:0000220!2.62e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.34e-14,43;CL:0000221,1.60e-13,44;CL:0000133,1.60e-13,44;CL:0000540,2.00e-10,33;CL:0000047,2.00e-10,33;CL:0000031,2.00e-10,33;CL:0000404,2.00e-10,33;CL:0000117,2.70e-10,23;CL:0000337,2.70e-10,23;CL:0000393,8.65e-10,39;CL:0000211,8.65e-10,39;CL:0002321,2.62e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.80e-25!75;UBERON:0001016!9.80e-25!75;UBERON:0001017!9.85e-24!73;UBERON:0005743!9.85e-24!73;UBERON:0004121!2.24e-18!102;UBERON:0000924!2.24e-18!102;UBERON:0006601!2.24e-18!102;UBERON:0001049!2.95e-17!52;UBERON:0005068!2.95e-17!52;UBERON:0006241!2.95e-17!52;UBERON:0007135!2.95e-17!52;UBERON:0000955!3.53e-17!50;UBERON:0006238!3.53e-17!50;UBERON:0002616!1.23e-16!49;UBERON:0002020!9.08e-15!34;UBERON:0000033!8.06e-14!63;UBERON:0002791!4.76e-13!29;UBERON:0003528!4.76e-13!29;UBERON:0001893!4.76e-13!29;UBERON:0002346!9.78e-13!71;UBERON:0003075!9.78e-13!71;UBERON:0007284!9.78e-13!71;UBERON:0003080!9.75e-12!40;UBERON:0000025!1.80e-11!114;UBERON:0002780!2.50e-11!39;UBERON:0001890!2.50e-11!39;UBERON:0006240!2.50e-11!39;UBERON:0004111!2.68e-10!122;UBERON:0003056!2.94e-10!49;UBERON:0000956!1.58e-09!21;UBERON:0001869!1.58e-09!21;UBERON:0000203!1.58e-09!21;UBERON:0002619!4.39e-08!17 | |ontology_enrichment_uberon=UBERON:0000073!9.80e-25!75;UBERON:0001016!9.80e-25!75;UBERON:0001017!9.85e-24!73;UBERON:0005743!9.85e-24!73;UBERON:0004121!2.24e-18!102;UBERON:0000924!2.24e-18!102;UBERON:0006601!2.24e-18!102;UBERON:0001049!2.95e-17!52;UBERON:0005068!2.95e-17!52;UBERON:0006241!2.95e-17!52;UBERON:0007135!2.95e-17!52;UBERON:0000955!3.53e-17!50;UBERON:0006238!3.53e-17!50;UBERON:0002616!1.23e-16!49;UBERON:0002020!9.08e-15!34;UBERON:0000033!8.06e-14!63;UBERON:0002791!4.76e-13!29;UBERON:0003528!4.76e-13!29;UBERON:0001893!4.76e-13!29;UBERON:0002346!9.78e-13!71;UBERON:0003075!9.78e-13!71;UBERON:0007284!9.78e-13!71;UBERON:0003080!9.75e-12!40;UBERON:0000025!1.80e-11!114;UBERON:0002780!2.50e-11!39;UBERON:0001890!2.50e-11!39;UBERON:0006240!2.50e-11!39;UBERON:0004111!2.68e-10!122;UBERON:0003056!2.94e-10!49;UBERON:0000956!1.58e-09!21;UBERON:0001869!1.58e-09!21;UBERON:0000203!1.58e-09!21;UBERON:0002619!4.39e-08!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.80e-25,75;UBERON:0001017,9.85e-24,73;UBERON:0004121,3.69e-21,95;UBERON:0000924,3.69e-21,95;UBERON:0006601,3.69e-21,95;UBERON:0000073,1.61e-18,54;UBERON:0001049,2.95e-17,52;UBERON:0005068,2.95e-17,52;UBERON:0006241,2.95e-17,52;UBERON:0007135,2.95e-17,52;UBERON:0010314,2.86e-16,92;UBERON:0002346,1.31e-15,64;UBERON:0003075,1.31e-15,64;UBERON:0007284,1.31e-15,64;UBERON:0000955,2.63e-15,47;UBERON:0006238,2.63e-15,47;UBERON:0002616,8.88e-15,46;UBERON:0002020,9.08e-15,34;UBERON:0010371,8.30e-14,73;UBERON:0003528,4.76e-13,29;UBERON:0002791,4.76e-13,29;UBERON:0001893,4.76e-13,29;UBERON:0003080,9.75e-12,40;UBERON:0000025,1.80e-11,114;UBERON:0002780,2.50e-11,39;UBERON:0001890,2.50e-11,39;UBERON:0006240,2.50e-11,39;UBERON:0004111,2.68e-10,122;UBERON:0003056,2.94e-10,49;UBERON:0000956,1.58e-09,21;UBERON:0001869,1.58e-09,21;UBERON:0000203,1.58e-09,21;UBERON:0002619,4.39e-08,17 | |||
|phase1_expression=34.4320021275307,55.8360652222978,41.8599300238373,27.8267074402284,29.0519523368881,8.39396359559449,10.0453435456076,12.2667157269497,33.7892933164,35.343743474621,9.41698825240277,11.7265073723145,16.4352700733957,13.3753215701066,11.3257319017325,13.1608923803387,7.69518065940961,16.0885704332701,17.0021897671116,16.5511964201232,79.4304330010992,27.5035934826452,15.9331871374751,22.0789543454901,17.2056960800378,22.3950466004858,17.6612418425221,14.8675150553263,15.2018735565099,9.32511480111744,11.9734475753865,19.0509202037889,19.6820732027062,15.8481681015439,1.73310971850765,3.15845826181135,3.47087905646027,60.6870864568516,44.5361146378566,35.5996145902183,57.6466858270394,63.5232301011354,49.5220560091777,44.4415767453788,43.9975881492693,42.9499400058335,349.728930923574,76.5268298895367,195.081330268211,82.6327071065705,65.9336045855458,142.315038721322,16.1071301815427,26.1130371124084,41.0034434953806,97.7585856936599,96.561769259361,82.5075347643908,145.87016827977,110.559114667855,134.37225754331,149.769283174556,180.526843610561,184.029492184046,266.005051530516,195.382031610178,195.638872168518,261.652665923979,106.800300677732,109.489815987001,109.158654941367,132.542056763365,109.329927771049,112.569044478543,103.896490583768,115.821567112863,198.2085857989,182.592893461818,171.271284580711,137.029852951671,111.61492519494,131.270169380304,168.347348397833,126.621587257128,128.503326380297,108.717948039783,101.938123452158,121.905237569747,124.493861839755,133.912804509224,91.0174494523268,32.6961073252927,93.1560727179618,43.7159585226632,37.6870322119648,41.6665005000522,57.3013234137548,85.7264522567631,62.6084271092914,62.8944442628406,27.8869971157827,65.4465034813021,262.449396897845,298.648015324399,41.1332977921307,47.3782948438434,42.9695778262566,42.3622193757712,63.9576572608514,36.8136504880765,51.5251420495424,39.2760467022662,41.2801740088345,31.8024771566034,41.9791684474466,39.4593096775181,49.1917985791404,82.5662328012695,59.2689069806416,132.163516407033,109.316551637895,71.2766622108776,22.3670113461747,186.501367696356,206.514452918067,31.4212177906567,44.2117809426846,17.9970819298022,38.8834894843578,129.419112445767,142.282687476593,136.083663338232,173.3028472317,152.406412568877,155.425457330551,153.155752335963,62.4275300402439,55.3611019214914,14.4051972307195,65.6578590365799,51.9180567421188,46.4402250955615,68.2435471962274,57.4185355954074,66.199513674242,59.70099365274,60.2502088919056,49.153640440413,75.8799335123605,70.3474618224288,70.9083030380714,59.8404349527279,51.7167883559612,75.5707201353101,66.8791943325816,50.9527723055343,11.2354109970118,19.0437451264889,33.5312929286799,67.3158760740381,55.3481501555387,55.6391769914536,75.5215706516821,68.6707168798439,63.7123176224872,73.7132604858793,87.9936756590751,84.4213425314635,113.875416140128,148.243220063423,191.970941004586,181.726584369688,158.954283470721,148.432299148971,150.567603171915,105.991750750663,64.7620814648244,27.7673094996721,57.5878276445132,57.1302212776679,47.2943583052082,33.8828321367215,32.9119504890408,30.2458745518969,41.758557415917,27.8341233483578,28.1495433856302,22.6810378126912,24.9554031512474,34.1551375288604,32.8529835809535,29.273767168392,61.2627320078454,45.6994050438915,40.574784842309,36.8608903400019,41.5058322538719,46.5000485872812,41.9258241133826,27.1602672282468,30.4577532012267,26.5303902431871,37.6494836400679,27.0289071260072,21.6214894624523,18.438693215558,24.5460746880089,23.6353616557368,17.0599320693551,30.7834867072367,35.0212089834076,26.0833342528677,31.629005436018,37.9583766621873,43.3732365629239,46.7270924202157,41.6201999370836,37.6305946663426,104.939812014631,52.1101382368833,63.5563408123901,45.4916829877504,48.3461911474314,57.1196337876592,56.8924301717573,99.1278931117618,66.2067605246002,83.7136526872369,114.488523896076,90.2886864083716,101.020714391549,107.329601467482,113.093462954454,159.908271042701,40.81643466058,42.4942589309288,155.57352169817,167.378288453666,69.8362867304637,190.110608184893,67.5187589550789,68.3267802519117,80.352927354334,81.4883601018202,83.7723014549802,107.569081699756,81.3669510366538,90.3070600945954,98.8219444866309,151.342340034671,45.5627673518542,58.7616492101942,63.3630271885411,71.4320632471078,18.5843193675948,38.844901784797,34.7672090509464,22.255399411196,37.2080385029774,33.817866273832,39.0226722684014,31.2639007350655,33.8672509465485,29.7074552459667,21.0837217149998,22.6898195146011,33.0226417581174,53.6582060213304,61.1866574292429,52.7269106177717,54.6207919618203,50.656744198988,52.4911375720766,69.4180083981286,94.5726983496753,100.196569518587,26.9044645627054,124.324234717876,80.5707489212569,75.8736595596201,47.7489376012546,50.2271153219887,32.9373345391731,190.246359862783,29.7315332588264,55.7244543500701,46.2986318424279,21.0972671845254,21.3242995244799,25.1655990527175,45.7241976683471,42.1253871494211,53.3451898885076,42.9601778106801,62.318190735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|phase1_expression=34.4320021275307,55.8360652222978,41.8599300238373,27.8267074402284,29.0519523368881,8.39396359559449,10.0453435456076,12.2667157269497,33.7892933164,35.343743474621,9.41698825240277,11.7265073723145,16.4352700733957,13.3753215701066,11.3257319017325,13.1608923803387,7.69518065940961,16.0885704332701,17.0021897671116,16.5511964201232,79.4304330010992,27.5035934826452,15.9331871374751,22.0789543454901,17.2056960800378,22.3950466004858,17.6612418425221,14.8675150553263,15.2018735565099,9.32511480111744,11.9734475753865,19.0509202037889,19.6820732027062,15.8481681015439,1.73310971850765,3.15845826181135,3.47087905646027,60.6870864568516,44.5361146378566,35.5996145902183,57.6466858270394,63.5232301011354,49.5220560091777,44.4415767453788,43.9975881492693,42.9499400058335,349.728930923574,76.5268298895367,195.081330268211,82.6327071065705,65.9336045855458,142.315038721322,16.1071301815427,26.1130371124084,41.0034434953806,97.7585856936599,96.561769259361,82.5075347643908,145.87016827977,110.559114667855,134.37225754331,149.769283174556,180.526843610561,184.029492184046,266.005051530516,195.382031610178,195.638872168518,261.652665923979,106.800300677732,109.489815987001,109.158654941367,132.542056763365,109.329927771049,112.569044478543,103.896490583768,115.821567112863,198.2085857989,182.592893461818,171.271284580711,137.029852951671,111.61492519494,131.270169380304,168.347348397833,126.621587257128,128.503326380297,108.717948039783,101.938123452158,121.905237569747,124.493861839755,133.912804509224,91.0174494523268,32.6961073252927,93.1560727179618,43.7159585226632,37.6870322119648,41.6665005000522,57.3013234137548,85.7264522567631,62.6084271092914,62.8944442628406,27.8869971157827,65.4465034813021,262.449396897845,298.648015324399,41.1332977921307,47.3782948438434,42.9695778262566,42.3622193757712,63.9576572608514,36.8136504880765,51.5251420495424,39.2760467022662,41.2801740088345,31.8024771566034,41.9791684474466,39.4593096775181,49.1917985791404,82.5662328012695,59.2689069806416,132.163516407033,109.316551637895,71.2766622108776,22.3670113461747,186.501367696356,206.514452918067,31.4212177906567,44.2117809426846,17.9970819298022,38.8834894843578,129.419112445767,142.282687476593,136.083663338232,173.3028472317,152.406412568877,155.425457330551,153.155752335963,62.4275300402439,55.3611019214914,14.4051972307195,65.6578590365799,51.9180567421188,46.4402250955615,68.2435471962274,57.4185355954074,66.199513674242,59.70099365274,60.2502088919056,49.153640440413,75.8799335123605,70.3474618224288,70.9083030380714,59.8404349527279,51.7167883559612,75.5707201353101,66.8791943325816,50.9527723055343,11.2354109970118,19.0437451264889,33.5312929286799,67.3158760740381,55.3481501555387,55.6391769914536,75.5215706516821,68.6707168798439,63.7123176224872,73.7132604858793,87.9936756590751,84.4213425314635,113.875416140128,148.243220063423,191.970941004586,181.726584369688,158.954283470721,148.432299148971,150.567603171915,105.991750750663,64.7620814648244,27.7673094996721,57.5878276445132,57.1302212776679,47.2943583052082,33.8828321367215,32.9119504890408,30.2458745518969,41.758557415917,27.8341233483578,28.1495433856302,22.6810378126912,24.9554031512474,34.1551375288604,32.8529835809535,29.273767168392,61.2627320078454,45.6994050438915,40.574784842309,36.8608903400019,41.5058322538719,46.5000485872812,41.9258241133826,27.1602672282468,30.4577532012267,26.5303902431871,37.6494836400679,27.0289071260072,21.6214894624523,18.438693215558,24.5460746880089,23.6353616557368,17.0599320693551,30.7834867072367,35.0212089834076,26.0833342528677,31.629005436018,37.9583766621873,43.3732365629239,46.7270924202157,41.6201999370836,37.6305946663426,104.939812014631,52.1101382368833,63.5563408123901,45.4916829877504,48.3461911474314,57.1196337876592,56.8924301717573,99.1278931117618,66.2067605246002,83.7136526872369,114.488523896076,90.2886864083716,101.020714391549,107.329601467482,113.093462954454,159.908271042701,40.81643466058,42.4942589309288,155.57352169817,167.378288453666,69.8362867304637,190.110608184893,67.5187589550789,68.3267802519117,80.352927354334,81.4883601018202,83.7723014549802,107.569081699756,81.3669510366538,90.3070600945954,98.8219444866309,151.342340034671,45.5627673518542,58.7616492101942,63.3630271885411,71.4320632471078,18.5843193675948,38.844901784797,34.7672090509464,22.255399411196,37.2080385029774,33.817866273832,39.0226722684014,31.2639007350655,33.8672509465485,29.7074552459667,21.0837217149998,22.6898195146011,33.0226417581174,53.6582060213304,61.1866574292429,52.7269106177717,54.6207919618203,50.656744198988,52.4911375720766,69.4180083981286,94.5726983496753,100.196569518587,26.9044645627054,124.324234717876,80.5707489212569,75.8736595596201,47.7489376012546,50.2271153219887,32.9373345391731,190.246359862783,29.7315332588264,55.7244543500701,46.2986318424279,21.0972671845254,21.3242995244799,25.1655990527175,45.7241976683471,42.1253871494211,53.3451898885076,42.9601778106801,62.318190735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| ||
|short_description=p1@Mtap7d1 | |short_description=p1@Mtap7d1 | ||
}} | }} |
Latest revision as of 08:22, 26 September 2015
Short description: | p1@Mtap7d1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mtap7d1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1083 |
Association with transcript: | 0bp_to_ENSMUST00000061143, ENSMUST00000106132, ENSMUST00000122129, ENSMUST00000170140, NM_001145970, NM_144941, uc008usz.2, uc008uta.2, uc008utb.2_5end |
EntrezGene: | Mtap7d1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.34e-14 | 43 |
ectodermal cell | 1.60e-13 | 44 |
neurectodermal cell | 1.60e-13 | 44 |
neuron | 2.00e-10 | 33 |
neuronal stem cell | 2.00e-10 | 33 |
neuroblast | 2.00e-10 | 33 |
electrically signaling cell | 2.00e-10 | 33 |
CNS neuron (sensu Vertebrata) | 2.70e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.70e-10 | 23 |
electrically responsive cell | 8.65e-10 | 39 |
electrically active cell | 8.65e-10 | 39 |
embryonic cell | 2.62e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 9.80e-25 | 75 |
central nervous system | 9.85e-24 | 73 |
ectoderm-derived structure | 3.69e-21 | 95 |
ectoderm | 3.69e-21 | 95 |
presumptive ectoderm | 3.69e-21 | 95 |
regional part of nervous system | 1.61e-18 | 54 |
neural tube | 2.95e-17 | 52 |
neural rod | 2.95e-17 | 52 |
future spinal cord | 2.95e-17 | 52 |
neural keel | 2.95e-17 | 52 |
structure with developmental contribution from neural crest | 2.86e-16 | 92 |
neurectoderm | 1.31e-15 | 64 |
neural plate | 1.31e-15 | 64 |
presumptive neural plate | 1.31e-15 | 64 |
brain | 2.63e-15 | 47 |
future brain | 2.63e-15 | 47 |
regional part of brain | 8.88e-15 | 46 |
gray matter | 9.08e-15 | 34 |
ecto-epithelium | 8.30e-14 | 73 |
brain grey matter | 4.76e-13 | 29 |
regional part of telencephalon | 4.76e-13 | 29 |
telencephalon | 4.76e-13 | 29 |
anterior neural tube | 9.75e-12 | 40 |
tube | 1.80e-11 | 114 |
regional part of forebrain | 2.50e-11 | 39 |
forebrain | 2.50e-11 | 39 |
future forebrain | 2.50e-11 | 39 |
anatomical conduit | 2.68e-10 | 122 |
pre-chordal neural plate | 2.94e-10 | 49 |
cerebral cortex | 1.58e-09 | 21 |
cerebral hemisphere | 1.58e-09 | 21 |
pallium | 1.58e-09 | 21 |
regional part of cerebral cortex | 4.39e-08 | 17 |