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FFCP PHASE1:Mm9::chr4:125939613..125939624,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=27096
|EntrezGene=27096
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-19bp_to_ENSMUST00000126786_5end
|association_with_transcript=-19bp_to_ENSMUST00000126786_5end
|cluster_id=chr4:125939613..125939624,+
|description=CAGE_peak_2_at_Trappc3_5end
|description=CAGE_peak_2_at_Trappc3_5end
|id=chr4:125939613..125939624,+
|id=chr4:125939613..125939624,+
|ontology_enrichment_celltype=CL:0000117!8.75e-10!23;CL:0000337!8.75e-10!23;CL:0002321!1.04e-09!70;CL:0000220!1.04e-09!70;CL:0002371!1.30e-08!118;CL:0000144!5.42e-08!121;CL:0000012!5.42e-08!121;CL:0000548!1.17e-07!115;CL:0000004!1.17e-07!115;CL:0000255!1.17e-07!115
|ontology_enrichment_celltype=CL:0000117!8.75e-10!23;CL:0000337!8.75e-10!23;CL:0002321!1.04e-09!70;CL:0000220!1.04e-09!70;CL:0002371!1.30e-08!118;CL:0000144!5.42e-08!121;CL:0000012!5.42e-08!121;CL:0000548!1.17e-07!115;CL:0000004!1.17e-07!115;CL:0000255!1.17e-07!115
|ontology_enrichment_celltype_v019_2=CL:0000117,8.75e-10,23;CL:0000337,8.75e-10,23;CL:0002321,1.04e-09,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.66e-13!52;UBERON:0005068!2.66e-13!52;UBERON:0006241!2.66e-13!52;UBERON:0007135!2.66e-13!52;UBERON:0000955!1.29e-12!50;UBERON:0006238!1.29e-12!50;UBERON:0002020!1.40e-12!34;UBERON:0002616!3.11e-12!49;UBERON:0000073!8.98e-12!75;UBERON:0001016!8.98e-12!75;UBERON:0001017!5.31e-11!73;UBERON:0005743!5.31e-11!73;UBERON:0002791!2.76e-10!29;UBERON:0003528!2.76e-10!29;UBERON:0001893!2.76e-10!29;UBERON:0000033!4.53e-09!63;UBERON:0004121!7.45e-09!102;UBERON:0000924!7.45e-09!102;UBERON:0006601!7.45e-09!102;UBERON:0003080!4.33e-08!40;UBERON:0002780!1.22e-07!39;UBERON:0001890!1.22e-07!39;UBERON:0006240!1.22e-07!39;UBERON:0002346!2.16e-07!71;UBERON:0003075!2.16e-07!71;UBERON:0007284!2.16e-07!71;UBERON:0000956!4.47e-07!21;UBERON:0001869!4.47e-07!21;UBERON:0000203!4.47e-07!21;UBERON:0003076!7.94e-07!12;UBERON:0003057!7.94e-07!12
|ontology_enrichment_uberon=UBERON:0001049!2.66e-13!52;UBERON:0005068!2.66e-13!52;UBERON:0006241!2.66e-13!52;UBERON:0007135!2.66e-13!52;UBERON:0000955!1.29e-12!50;UBERON:0006238!1.29e-12!50;UBERON:0002020!1.40e-12!34;UBERON:0002616!3.11e-12!49;UBERON:0000073!8.98e-12!75;UBERON:0001016!8.98e-12!75;UBERON:0001017!5.31e-11!73;UBERON:0005743!5.31e-11!73;UBERON:0002791!2.76e-10!29;UBERON:0003528!2.76e-10!29;UBERON:0001893!2.76e-10!29;UBERON:0000033!4.53e-09!63;UBERON:0004121!7.45e-09!102;UBERON:0000924!7.45e-09!102;UBERON:0006601!7.45e-09!102;UBERON:0003080!4.33e-08!40;UBERON:0002780!1.22e-07!39;UBERON:0001890!1.22e-07!39;UBERON:0006240!1.22e-07!39;UBERON:0002346!2.16e-07!71;UBERON:0003075!2.16e-07!71;UBERON:0007284!2.16e-07!71;UBERON:0000956!4.47e-07!21;UBERON:0001869!4.47e-07!21;UBERON:0000203!4.47e-07!21;UBERON:0003076!7.94e-07!12;UBERON:0003057!7.94e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.57e-14,54;UBERON:0001049,2.66e-13,52;UBERON:0005068,2.66e-13,52;UBERON:0006241,2.66e-13,52;UBERON:0007135,2.66e-13,52;UBERON:0002020,1.40e-12,34;UBERON:0001016,8.98e-12,75;UBERON:0001017,5.31e-11,73;UBERON:0000955,5.93e-11,47;UBERON:0006238,5.93e-11,47;UBERON:0002616,1.38e-10,46;UBERON:0003528,2.76e-10,29;UBERON:0002791,2.76e-10,29;UBERON:0001893,2.76e-10,29;UBERON:0004121,1.78e-09,95;UBERON:0000924,1.78e-09,95;UBERON:0006601,1.78e-09,95;UBERON:0002346,3.55e-08,64;UBERON:0003075,3.55e-08,64;UBERON:0007284,3.55e-08,64;UBERON:0003080,4.33e-08,40;UBERON:0010371,5.49e-08,73;UBERON:0002780,1.22e-07,39;UBERON:0001890,1.22e-07,39;UBERON:0006240,1.22e-07,39;UBERON:0000956,4.47e-07,21;UBERON:0001869,4.47e-07,21;UBERON:0000203,4.47e-07,21;UBERON:0003076,7.94e-07,12;UBERON:0003057,7.94e-07,12
|phase1_expression=5.92550734287738,10.8182376368202,14.1049764210756,11.1911758183527,13.5241847085514,7.38668796412315,9.57811826441655,4.77756296733832,1.12630977721333,0.936258105287974,4.10923123741212,2.87179772383211,6.16322627752341,4.28359971853087,5.66286595086627,4.45445588257617,8.39474253753776,3.62781490161973,5.48457734422955,5.51706547337439,6.63337663178344,3.87234709683453,5.22399578277871,7.83962871687693,8.94696196161963,10.9104073181854,8.61523992318149,9.69620547086501,8.93110071444957,7.30887376303799,9.09095093686749,3.81018404075779,3.07532393792285,0,4.91047753577167,6.64938581433969,6.32925004413344,10.0447591376858,11.720030167857,10.470474879476,10.5881667845583,14.3439551841274,10.6812277666854,4.15459499319405,5.47435428585379,3.30384153891027,10.1710874765245,13.2995345392072,8.5677611266444,13.6100929351998,8.53917171914711,11.5002051491977,5.20126078778983,3.62681071005672,5.04140698713696,5.91696702882678,6.5902691185914,5.67239301505187,10.3181395038395,13.7537654610729,3.80298842103708,10.5041804941431,11.5608323494448,16.1981949110652,16.8107281636386,21.314403448383,10.7856039786626,13.0634223809329,9.12468588314603,7.96535036156975,7.36137364729837,13.7112472513826,13.0312439161452,9.0643191419066,12.6516021744072,9.19218786610021,15.4162233399144,12.5133591323484,13.3637683932932,7.78129097608144,12.1678565991205,7.8137005583514,13.4007839520663,12.380777420697,13.1406493088057,12.0797720044204,11.10499110233,7.26957838718672,9.08714319998209,12.0914496170857,8.40607017234866,7.74381489283248,4.0798280022465,9.71465744948071,9.09686984426737,6.2723764193627,7.72444310724635,8.01022516116871,6.23486411046885,8.12681021373782,4.92951969218382,15.3991772897181,30.5766287647975,7.11066703153331,5.41227602528035,6.08063677140237,7.58286667522175,6.62266502370548,1.29468941823586,7.12522267511159,3.29622120855658,4.26251669636998,5.07354093963329,6.0289056221049,4.46837087115678,6.53466274914312,8.65182387070309,5.49477556295664,1.76922110389975,5.17653919831709,3.75430581382669,3.39412677194655,1.86391761218122,10.2473278954042,10.8912287542997,5.62005521458901,3.23500836165985,5.39912457894067,4.19331749341113,12.1330417917906,9.60751265919116,9.5497307605777,10.9509321721134,15.3429274398198,10.1816141834184,10.5456820994042,3.05518091550949,5.97153458928446,10.867078612648,12.416069497302,3.90361328888111,4.36813998423599,2.70093194708024,3.16480117455002,2.72145996605311,3.07472928683639,4.40398105430725,6.98499100995342,3.44908788692548,3.78212160335639,2.99116911078713,4.82230611340665,4.72680323683516,4.179025998266,3.49829631893504,3.38358253591438,8.42655824775882,6.43369767786788,5.68326998791185,3.10688658803253,3.04883877975425,4.32148947506436,1.89395788468168,3.73852040320067,4.9365476123961,5.11574678450897,4.82892122519315,5.02090972178829,5.43047504714485,4.10418660197738,6.4044359541226,6.43279944671462,4.61055242111206,6.71032093801859,7.99101804543684,8.33527360272204,8.92130714056255,6.87571473325215,2.77274725695804,3.0190767341857,3.60828891701861,4.23535401709019,4.66993892074228,5.70676878337677,7.11793592316767,9.71723832871664,5.27803938480566,10.7436494902221,8.77338392036041,7.19055526923377,7.78096979548899,8.16479220342906,2.84501851429623,3.08470984046268,4.50830942692322,3.46207257337034,5.43066964069352,4.69909993265134,3.79419222745544,10.4803205065518,7.37894020854462,7.15703550746443,4.74324203339438,2.8363667971736,4.71741588271687,3.14806957338795,4.26006254915856,2.65294875727659,3.8193877767213,4.02774592431135,3.89124544260085,5.21666685057355,2.87536413054709,4.09355042435354,6.55279113540577,4.79899868099512,6.27890947326693,5.30687873499704,5.35784251483154,2.84237117655727,1.79261474086228,4.07388205860452,3.28566347603903,4.69017520837084,3.09456733151818,4.68320754858717,2.52216230569906,5.75808193086815,5.26200736569707,5.73521601505083,4.48980952851328,6.65385669474953,7.53956419696361,5.98296252200581,15.2446924635901,3.58717770196152,10.2752377592187,11.7211686592203,5.90165803356032,5.55436039849621,3.47059041357882,3.90438744296638,2.15423397732799,2.38968797952552,3.34198011123591,2.54768877709949,1.61924280669958,2.63030272120181,3.55759000151871,9.96096080907602,3.97432238583152,4.09550888434687,3.09485222771795,4.45419332025846,9.2921596837974,4.37005145078967,2.41858845571801,2.82907619633847,2.36241514304618,2.76691633149535,3.6179961043551,6.18007340111759,4.9909632973861,3.79244109522979,3.16255825724996,6.18813259489121,5.7874732978144,3.42116078659489,4.2688365648309,4.71541477069503,2.83744373827638,3.0322698992352,5.59466670047211,6.39376393140658,5.39744928546534,6.77862626764225,7.27743713581374,7.25499512942512,5.16686165426898,4.28221766989907,6.80422360817878,5.58079059133208,7.57850175237612,12.0526446306831,4.61351378154202,2.88941615148511,3.70389054739423,2.44878994106098,2.7338845544205,3.20289442489132,3.73952545986482,4.61839792668071,4.28419918793714,7.63736494412091,2.05618395827738,3.65975040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|phase1_expression=5.92550734287738,10.8182376368202,14.1049764210756,11.1911758183527,13.5241847085514,7.38668796412315,9.57811826441655,4.77756296733832,1.12630977721333,0.936258105287974,4.10923123741212,2.87179772383211,6.16322627752341,4.28359971853087,5.66286595086627,4.45445588257617,8.39474253753776,3.62781490161973,5.48457734422955,5.51706547337439,6.63337663178344,3.87234709683453,5.22399578277871,7.83962871687693,8.94696196161963,10.9104073181854,8.61523992318149,9.69620547086501,8.93110071444957,7.30887376303799,9.09095093686749,3.81018404075779,3.07532393792285,0,4.91047753577167,6.64938581433969,6.32925004413344,10.0447591376858,11.720030167857,10.470474879476,10.5881667845583,14.3439551841274,10.6812277666854,4.15459499319405,5.47435428585379,3.30384153891027,10.1710874765245,13.2995345392072,8.5677611266444,13.6100929351998,8.53917171914711,11.5002051491977,5.20126078778983,3.62681071005672,5.04140698713696,5.91696702882678,6.5902691185914,5.67239301505187,10.3181395038395,13.7537654610729,3.80298842103708,10.5041804941431,11.5608323494448,16.1981949110652,16.8107281636386,21.314403448383,10.7856039786626,13.0634223809329,9.12468588314603,7.96535036156975,7.36137364729837,13.7112472513826,13.0312439161452,9.0643191419066,12.6516021744072,9.19218786610021,15.4162233399144,12.5133591323484,13.3637683932932,7.78129097608144,12.1678565991205,7.8137005583514,13.4007839520663,12.380777420697,13.1406493088057,12.0797720044204,11.10499110233,7.26957838718672,9.08714319998209,12.0914496170857,8.40607017234866,7.74381489283248,4.0798280022465,9.71465744948071,9.09686984426737,6.2723764193627,7.72444310724635,8.01022516116871,6.23486411046885,8.12681021373782,4.92951969218382,15.3991772897181,30.5766287647975,7.11066703153331,5.41227602528035,6.08063677140237,7.58286667522175,6.62266502370548,1.29468941823586,7.12522267511159,3.29622120855658,4.26251669636998,5.07354093963329,6.0289056221049,4.46837087115678,6.53466274914312,8.65182387070309,5.49477556295664,1.76922110389975,5.17653919831709,3.75430581382669,3.39412677194655,1.86391761218122,10.2473278954042,10.8912287542997,5.62005521458901,3.23500836165985,5.39912457894067,4.19331749341113,12.1330417917906,9.60751265919116,9.5497307605777,10.9509321721134,15.3429274398198,10.1816141834184,10.5456820994042,3.05518091550949,5.97153458928446,10.867078612648,12.416069497302,3.90361328888111,4.36813998423599,2.70093194708024,3.16480117455002,2.72145996605311,3.07472928683639,4.40398105430725,6.98499100995342,3.44908788692548,3.78212160335639,2.99116911078713,4.82230611340665,4.72680323683516,4.179025998266,3.49829631893504,3.38358253591438,8.42655824775882,6.43369767786788,5.68326998791185,3.10688658803253,3.04883877975425,4.32148947506436,1.89395788468168,3.73852040320067,4.9365476123961,5.11574678450897,4.82892122519315,5.02090972178829,5.43047504714485,4.10418660197738,6.4044359541226,6.43279944671462,4.61055242111206,6.71032093801859,7.99101804543684,8.33527360272204,8.92130714056255,6.87571473325215,2.77274725695804,3.0190767341857,3.60828891701861,4.23535401709019,4.66993892074228,5.70676878337677,7.11793592316767,9.71723832871664,5.27803938480566,10.7436494902221,8.77338392036041,7.19055526923377,7.78096979548899,8.16479220342906,2.84501851429623,3.08470984046268,4.50830942692322,3.46207257337034,5.43066964069352,4.69909993265134,3.79419222745544,10.4803205065518,7.37894020854462,7.15703550746443,4.74324203339438,2.8363667971736,4.71741588271687,3.14806957338795,4.26006254915856,2.65294875727659,3.8193877767213,4.02774592431135,3.89124544260085,5.21666685057355,2.87536413054709,4.09355042435354,6.55279113540577,4.79899868099512,6.27890947326693,5.30687873499704,5.35784251483154,2.84237117655727,1.79261474086228,4.07388205860452,3.28566347603903,4.69017520837084,3.09456733151818,4.68320754858717,2.52216230569906,5.75808193086815,5.26200736569707,5.73521601505083,4.48980952851328,6.65385669474953,7.53956419696361,5.98296252200581,15.2446924635901,3.58717770196152,10.2752377592187,11.7211686592203,5.90165803356032,5.55436039849621,3.47059041357882,3.90438744296638,2.15423397732799,2.38968797952552,3.34198011123591,2.54768877709949,1.61924280669958,2.63030272120181,3.55759000151871,9.96096080907602,3.97432238583152,4.09550888434687,3.09485222771795,4.45419332025846,9.2921596837974,4.37005145078967,2.41858845571801,2.82907619633847,2.36241514304618,2.76691633149535,3.6179961043551,6.18007340111759,4.9909632973861,3.79244109522979,3.16255825724996,6.18813259489121,5.7874732978144,3.42116078659489,4.2688365648309,4.71541477069503,2.83744373827638,3.0322698992352,5.59466670047211,6.39376393140658,5.39744928546534,6.77862626764225,7.27743713581374,7.25499512942512,5.16686165426898,4.28221766989907,6.80422360817878,5.58079059133208,7.57850175237612,12.0526446306831,4.61351378154202,2.88941615148511,3.70389054739423,2.44878994106098,2.7338845544205,3.20289442489132,3.73952545986482,4.61839792668071,4.28419918793714,7.63736494412091,2.05618395827738,3.65975040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|short_description=p2@Trappc3
|short_description=p2@Trappc3
}}
}}

Latest revision as of 08:23, 26 September 2015

Short description:p2@Trappc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Trappc3_5end
Coexpression cluster:NA
Association with transcript: -19bp_to_ENSMUST00000126786_5end
EntrezGene:Trappc3
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Trappc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I614.10
CD326+ enterocyte, pool1.CNhs13542.11848-124I311.19
CD326+ enterocyte, pool2.CNhs13197.11849-124I413.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.39
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.58
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.78
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.87
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.16
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.28
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.45
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A58.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.48
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.22
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.95
GP2+ M cell, pool1.CNhs13228.11845-124H910.91
GP2+ M cell, pool2.CNhs13231.11846-124I18.62
GP2+ M cell, pool3.CNhs13240.11847-124I29.70
Ileum epithelium, pool1.CNhs13199.10252-104B98.93
Ileum epithelium, pool2.CNhs13232.10253-104C17.31
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.09
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.91
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G810.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H111.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G910.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H214.34
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H410.68
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.47
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.30
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.57
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.61
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.20
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.04
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.92
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.59
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C310.32
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.50
Mouse Meningeal cells, donor3.CNhs12109.11639-122D111.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C716.20
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E716.81
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D221.31
Mouse Microglia, donor1.CNhs12629.11718-123C810.79
Mouse Microglia, donor2.CNhs12634.11736-123E813.06
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.12
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.03
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.36
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.78
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.17
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.10
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.27
Mouse Schwann, donor1.CNhs12507.11728-123D99.09
Mouse Schwann, donor2.CNhs12573.11746-123F912.09
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.41
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.71
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.13
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.93
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.40
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I830.58
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.58
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.62
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D77.13
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I15.07
adrenal gland, embryo E18.CNhs11026.1262-18F56.03
adrenal gland, neonate N00.CNhs11191.1311-23C14.47
adrenal gland, neonate N25.CNhs11223.1377-27I36.53
amnion, adult pregnant day17.5.CNhs10488.583-22A88.65
aorta, adult.CNhs10498.46-23H15.49
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F55.18
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B210.25
cerebellum, neonate N30.CNhs11135.1395-42I210.89
colon, adult.CNhs10468.36-18H75.62
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.19
corpora quadrigemina, adult.CNhs10501.16-22A412.13
corpus striatum, adult.CNhs10487.19-21D89.61
corpus striatum, neonate N00.CNhs11226.630-43F19.55
cortex, adult.CNhs10473.12-14D510.95
cortex, neonate N30.CNhs11107.1392-42F215.34
diencephalon, adult.CNhs10482.20-12F210.18
diencephalon, neonate N30.CNhs11201.1388-42B210.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.97
epididymis, adult.CNhs10490.58-23B210.87
eyeball, adult.CNhs10484.31-12G412.42
eyeball, embryo E12.CNhs11016.345-16C63.90
eyeball, embryo E14.CNhs10521.399-16E24.37
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C62.72
eyeball, neonate N01.CNhs11140.1532-43E73.07
eyeball, neonate N02.CNhs11205.1551-44G84.40
eyeball, neonate N16.CNhs11188.777-19A26.98
forelimb, embryo E11.CNhs10596.335-25E23.45
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A84.82
forelimb, embryo E15.CNhs11007.437-20E74.73
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B53.50
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.43
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.68
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I94.32
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C83.74
heart, embryo E16.CNhs11021.457-17C64.94
heart, embryo E17.CNhs11025.479-18E55.12
heart, embryo E18.CNhs11030.1283-20G34.83
heart, neonate N00.CNhs11213.639-21E35.02
heart, neonate N03.CNhs11221.1349-25I25.43
heart, neonate N10.CNhs11118.749-24G14.10
heart, neonate N16.CNhs11209.782-15G16.40
heart, neonate N20.CNhs11127.821-26I66.43
heart, neonate N25.CNhs11196.1351-25D34.61
heart, neonate N30.CNhs11202.1390-42D26.71
hippocampus, adult.CNhs10478.13-16E87.99
hippocampus, neonate N00.CNhs11228.627-43G18.34
intestinal mucosa, adult.CNhs10506.860-29I38.92
intestine, adult.CNhs10496.178-9A36.88
intestine, embryo E12.CNhs11019.1251-16I52.77
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D83.61
intestine, embryo E16.CNhs10585.463-22H44.24
intestine, embryo E17.CNhs10582.482-18D34.67
intestine, embryo E18.CNhs10526.1289-20F75.71
intestine, neonate N00.CNhs11126.644-26D17.12
intestine, neonate N01.CNhs11192.1322-23E99.72
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F210.74
intestine, neonate N10.CNhs11098.755-23A58.77
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E37.78
intestine, neonate N30.CNhs11131.1384-42G18.16
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F83.08
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C75.43
kidney, neonate N00.CNhs11214.646-21G74.70
kidney, neonate N10.CNhs11206.758-6D53.79
kidney, neonate N20.CNhs11113.832-19I110.48
kidney, neonate N25.CNhs11122.1353-25F37.38
kidney, neonate N30.CNhs11203.1385-42H17.16
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H64.72
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D74.26
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A33.82
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F43.89
liver, neonate N03.CNhs11123.1345-25G25.22
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B96.55
liver, neonate N20.CNhs11220.823-25A34.80
liver, neonate N25.CNhs11198.1368-26H16.28
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B15.36
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C54.07
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A64.69
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C64.68
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E65.26
lung, neonate N20.CNhs11109.822-18A45.74
lung, neonate N25.CNhs11119.1359-25C74.49
lung, neonate N30.CNhs11133.1394-42H26.65
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.98
mammary gland, adult lactating day02.CNhs10480.595-22B615.24
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C210.28
medulla oblongata, neonate N30.CNhs11200.1396-42A311.72
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.90
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.55
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I99.96
ovary, adult.CNhs10507.91-2I73.97
ovary, embryo E18.CNhs11040.505-44H74.10
ovary, neonate N00.CNhs11217.1299-22I43.09
oviduct, adult pregnant day01.CNhs10500.988-6G64.45
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E52.83
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G85.79
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C74.27
pituitary gland, embryo E14.CNhs11037.398-44A54.72
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F55.59
pituitary gland, neonate N00.CNhs11190.1308-22E96.39
placenta, adult pregnant day10.CNhs10472.539-13I75.40
placenta, adult pregnant day17.CNhs10464.577-18G36.78
prostate, adult.CNhs10470.859-1F87.28
skin, adult.CNhs10492.30-1C37.25
skin, neonate N00.CNhs11124.650-25G45.17
skin, neonate N03.CNhs11215.662-22H34.28
skin, neonate N06.CNhs11097.693-20I56.80
skin, neonate N10.CNhs11108.762-6C45.58
small intestine, neonate N16.CNhs11114.790-21I17.58
spinal cord, adult.CNhs10505.24-13C912.05
spleen, adult.CNhs10465.25-2G24.61
spleen, embryo E16.CNhs11035.461-43C12.89
spleen, embryo E18.CNhs11011.1271-21F23.70
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H12.73
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.28
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D45.18
stomach, embryo E17.CNhs11006.1035-18D54.81
stomach, embryo E18.CNhs10999.1286-20C64.80
stomach, neonate N03.CNhs11193.1340-24B87.01
stomach, neonate N07.CNhs11210.718-18A94.71
stomach, neonate N25.CNhs11104.1355-25E46.02
stomach, neonate N30.CNhs11134.1386-42I18.30
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F53.89
testis, embryo E15.CNhs11034.443-27C55.46
testis, embryo E16.CNhs11033.470-26G54.47
testis, embryo E17.CNhs11029.486-18I54.26
testis, embryo E18.CNhs11027.503-18G54.22
testis, neonate N00.CNhs11189.1300-22B73.29
testis, neonate N07.CNhs11222.726-26I43.91
testis, neonate N10.CNhs11204.763-44D93.67
testis, neonate N20.CNhs11110.839-18H34.11
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B56.32
thymus, embryo E14.CNhs11041.402-44I44.87
thymus, embryo E15.CNhs11005.430-45I24.01
thymus, embryo E16.CNhs11002.456-26C54.29
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F83.85
thymus, neonate N03.CNhs11137.2104-43C73.69
thymus, neonate N06.CNhs11197.681-26C44.04
thymus, neonate N07.CNhs11211.713-19D33.89
thymus, neonate N10.CNhs11194.748-24E43.02
thymus, neonate N20.CNhs11186.820-7A25.36
thymus, neonate N25.CNhs11125.1362-25G73.85
thymus, neonate N30.CNhs11132.1393-42G23.27
tongue, adult.CNhs10499.32-1B44.76
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.50
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.71
urinary bladder, adult.CNhs10481.879-12E46.18
uterus, adult pregnant day19.CNhs10497.590-15F56.76
uterus, adult.CNhs10509.92-27E54.76
vagina, adult.CNhs10502.89-27D58.36
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.69
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I84.26
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F26.07
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.56
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.51
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I56.25
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D16.40
whole body, neonate N10.CNhs10518.761-6B46.49





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.75e-1023
neuroblast (sensu Vertebrata)8.75e-1023
embryonic cell1.04e-0970

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.57e-1454
neural tube2.66e-1352
neural rod2.66e-1352
future spinal cord2.66e-1352
neural keel2.66e-1352
gray matter1.40e-1234
nervous system8.98e-1275
central nervous system5.31e-1173
brain5.93e-1147
future brain5.93e-1147
regional part of brain1.38e-1046
brain grey matter2.76e-1029
regional part of telencephalon2.76e-1029
telencephalon2.76e-1029
ectoderm-derived structure1.78e-0995
ectoderm1.78e-0995
presumptive ectoderm1.78e-0995
neurectoderm3.55e-0864
neural plate3.55e-0864
presumptive neural plate3.55e-0864
anterior neural tube4.33e-0840
ecto-epithelium5.49e-0873
regional part of forebrain1.22e-0739
forebrain1.22e-0739
future forebrain1.22e-0739
cerebral cortex4.47e-0721
cerebral hemisphere4.47e-0721
pallium4.47e-0721
posterior neural tube7.94e-0712
chordal neural plate7.94e-0712
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