FFCP PHASE1:Mm9::chr14:70857254..70857351,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=105653 | |EntrezGene=105653 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K0S0,B9EIC7 | |UniProt=Q8K0S0,B9EIC7 | ||
|association_with_transcript=0bp_to_ENSMUST00000003561,NM_145981,uc007uoa.1_5end | |association_with_transcript=0bp_to_ENSMUST00000003561,NM_145981,uc007uoa.1_5end | ||
|cluster_id=chr14:70857254..70857351,+ | |||
|description=CAGE_peak_1_at_Phyhip_5end | |description=CAGE_peak_1_at_Phyhip_5end | ||
|id=chr14:70857254..70857351,+ | |id=chr14:70857254..70857351,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.37e-07!23;CL:0000337!1.37e-07!23 | |ontology_enrichment_celltype=CL:0000117!1.37e-07!23;CL:0000337!1.37e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.33e-08,23;CL:0000337,2.33e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.62e-22!102;UBERON:0000924!4.62e-22!102;UBERON:0006601!4.62e-22!102;UBERON:0000033!6.65e-21!63;UBERON:0001049!7.55e-21!52;UBERON:0005068!7.55e-21!52;UBERON:0006241!7.55e-21!52;UBERON:0007135!7.55e-21!52;UBERON:0000955!2.71e-20!50;UBERON:0006238!2.71e-20!50;UBERON:0002616!1.09e-19!49;UBERON:0002346!1.25e-19!71;UBERON:0003075!1.25e-19!71;UBERON:0007284!1.25e-19!71;UBERON:0001017!7.10e-19!73;UBERON:0005743!7.10e-19!73;UBERON:0000073!1.16e-17!75;UBERON:0001016!1.16e-17!75;UBERON:0003056!4.95e-16!49;UBERON:0003080!1.48e-15!40;UBERON:0002780!6.08e-15!39;UBERON:0001890!6.08e-15!39;UBERON:0006240!6.08e-15!39;UBERON:0002020!1.26e-14!34;UBERON:0002791!2.34e-12!29;UBERON:0003528!2.34e-12!29;UBERON:0001893!2.34e-12!29;UBERON:0000153!6.17e-12!94;UBERON:0007811!1.94e-10!86;UBERON:0000956!2.95e-09!21;UBERON:0001869!2.95e-09!21;UBERON:0000203!2.95e-09!21;UBERON:0002619!4.89e-09!17;UBERON:0002021!4.66e-08!10;UBERON:0000411!4.66e-08!10;UBERON:0001950!4.66e-08!10;UBERON:0000468!7.42e-08!333 | |ontology_enrichment_uberon=UBERON:0004121!4.62e-22!102;UBERON:0000924!4.62e-22!102;UBERON:0006601!4.62e-22!102;UBERON:0000033!6.65e-21!63;UBERON:0001049!7.55e-21!52;UBERON:0005068!7.55e-21!52;UBERON:0006241!7.55e-21!52;UBERON:0007135!7.55e-21!52;UBERON:0000955!2.71e-20!50;UBERON:0006238!2.71e-20!50;UBERON:0002616!1.09e-19!49;UBERON:0002346!1.25e-19!71;UBERON:0003075!1.25e-19!71;UBERON:0007284!1.25e-19!71;UBERON:0001017!7.10e-19!73;UBERON:0005743!7.10e-19!73;UBERON:0000073!1.16e-17!75;UBERON:0001016!1.16e-17!75;UBERON:0003056!4.95e-16!49;UBERON:0003080!1.48e-15!40;UBERON:0002780!6.08e-15!39;UBERON:0001890!6.08e-15!39;UBERON:0006240!6.08e-15!39;UBERON:0002020!1.26e-14!34;UBERON:0002791!2.34e-12!29;UBERON:0003528!2.34e-12!29;UBERON:0001893!2.34e-12!29;UBERON:0000153!6.17e-12!94;UBERON:0007811!1.94e-10!86;UBERON:0000956!2.95e-09!21;UBERON:0001869!2.95e-09!21;UBERON:0000203!2.95e-09!21;UBERON:0002619!4.89e-09!17;UBERON:0002021!4.66e-08!10;UBERON:0000411!4.66e-08!10;UBERON:0001950!4.66e-08!10;UBERON:0000468!7.42e-08!333 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.81e-23,54;UBERON:0004121,9.43e-23,95;UBERON:0000924,9.43e-23,95;UBERON:0006601,9.43e-23,95;UBERON:0010371,9.87e-23,73;UBERON:0001049,8.25e-22,52;UBERON:0005068,8.25e-22,52;UBERON:0006241,8.25e-22,52;UBERON:0007135,8.25e-22,52;UBERON:0002346,8.74e-21,64;UBERON:0003075,8.74e-21,64;UBERON:0007284,8.74e-21,64;UBERON:0001017,1.55e-19,73;UBERON:0000955,4.44e-19,47;UBERON:0006238,4.44e-19,47;UBERON:0002616,2.00e-18,46;UBERON:0001016,2.79e-18,75;UBERON:0003056,5.25e-17,49;UBERON:0010314,1.98e-16,92;UBERON:0003080,2.09e-16,40;UBERON:0002020,2.76e-16,34;UBERON:0002780,1.00e-15,39;UBERON:0001890,1.00e-15,39;UBERON:0006240,1.00e-15,39;UBERON:0003528,9.95e-14,29;UBERON:0002791,9.95e-14,29;UBERON:0001893,9.95e-14,29;UBERON:0000956,3.10e-10,21;UBERON:0001869,3.10e-10,21;UBERON:0000203,3.10e-10,21;UBERON:0002619,5.48e-10,17;UBERON:0002021,6.93e-09,10;UBERON:0000411,6.93e-09,10;UBERON:0001950,6.93e-09,10 | |||
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| ||
|short_description=p1@Phyhip | |short_description=p1@Phyhip | ||
}} | }} |
Latest revision as of 08:29, 26 September 2015
Short description: | p1@Phyhip |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Phyhip_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000003561, NM_145981, uc007uoa.1_5end |
EntrezGene: | Phyhip |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.33e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.33e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.81e-23 | 54 |
ectoderm-derived structure | 9.43e-23 | 95 |
ectoderm | 9.43e-23 | 95 |
presumptive ectoderm | 9.43e-23 | 95 |
ecto-epithelium | 9.87e-23 | 73 |
neural tube | 8.25e-22 | 52 |
neural rod | 8.25e-22 | 52 |
future spinal cord | 8.25e-22 | 52 |
neural keel | 8.25e-22 | 52 |
neurectoderm | 8.74e-21 | 64 |
neural plate | 8.74e-21 | 64 |
presumptive neural plate | 8.74e-21 | 64 |
central nervous system | 1.55e-19 | 73 |
brain | 4.44e-19 | 47 |
future brain | 4.44e-19 | 47 |
regional part of brain | 2.00e-18 | 46 |
nervous system | 2.79e-18 | 75 |
pre-chordal neural plate | 5.25e-17 | 49 |
structure with developmental contribution from neural crest | 1.98e-16 | 92 |
anterior neural tube | 2.09e-16 | 40 |
gray matter | 2.76e-16 | 34 |
regional part of forebrain | 1.00e-15 | 39 |
forebrain | 1.00e-15 | 39 |
future forebrain | 1.00e-15 | 39 |
brain grey matter | 9.95e-14 | 29 |
regional part of telencephalon | 9.95e-14 | 29 |
telencephalon | 9.95e-14 | 29 |
cerebral cortex | 3.10e-10 | 21 |
cerebral hemisphere | 3.10e-10 | 21 |
pallium | 3.10e-10 | 21 |
regional part of cerebral cortex | 5.48e-10 | 17 |
occipital lobe | 6.93e-09 | 10 |
visual cortex | 6.93e-09 | 10 |
neocortex | 6.93e-09 | 10 |