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FFCP PHASE1:Mm9::chr12:112997059..112997126,+: Difference between revisions

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(Created page with "{{FFCP |id=chr12:112997059..112997126,+ |short_description=p1@Klc1 |description=CAGE_peak_1_at_Klc1_5end |association_with_transcript=0bp_to_ENSMUST00000021717,ENSMUST0000...")
 
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{{FFCP
{{FFCP
|id=chr12:112997059..112997126,+
|DHSsupport=NA
|short_description=p1@Klc1
|DPIdataset=NA
|description=CAGE_peak_1_at_Klc1_5end
|association_with_transcript=0bp_to_ENSMUST00000021717,ENSMUST00000069328,ENSMUST00000084941,ENSMUST00000084942,NM_001025360,NM_001081959,NM_008450,uc007pdv.1,uc007pdw.1,uc007pdx.1_5end
|EntrezGene=16593
|EntrezGene=16593
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=E9QKS0,E9QM07,Q8CD76,D3Z5T6,Q7TNF4,Q5UE59
|UniProt=E9QKS0,E9QM07,Q8CD76,D3Z5T6,Q7TNF4,Q5UE59
|association_with_transcript=0bp_to_ENSMUST00000021717,ENSMUST00000069328,ENSMUST00000084941,ENSMUST00000084942,NM_001025360,NM_001081959,NM_008450,uc007pdv.1,uc007pdw.1,uc007pdx.1_5end
|cluster_id=chr12:112997059..112997126,+
|description=CAGE_peak_1_at_Klc1_5end
|id=chr12:112997059..112997126,+
|ontology_enrichment_celltype=CL:0002319!1.67e-19!43;CL:0000221!2.82e-19!44;CL:0000133!2.82e-19!44;CL:0000055!3.01e-19!50;CL:0000540!7.84e-17!33;CL:0000047!7.84e-17!33;CL:0000031!7.84e-17!33;CL:0000404!7.84e-17!33;CL:0000393!1.49e-16!39;CL:0000211!1.49e-16!39;CL:0000117!1.52e-14!23;CL:0000337!1.52e-14!23;CL:0002321!3.43e-11!70;CL:0000220!3.43e-11!70
|ontology_enrichment_celltype_v019_2=CL:0002319,1.67e-19,43;CL:0000221,2.82e-19,44;CL:0000133,2.82e-19,44;CL:0000540,7.84e-17,33;CL:0000047,7.84e-17,33;CL:0000031,7.84e-17,33;CL:0000404,7.84e-17,33;CL:0000393,1.49e-16,39;CL:0000211,1.49e-16,39;CL:0000117,1.52e-14,23;CL:0000337,1.52e-14,23;CL:0002321,3.43e-11,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!5.68e-34!75;UBERON:0001016!5.68e-34!75;UBERON:0001017!6.27e-33!73;UBERON:0005743!6.27e-33!73;UBERON:0004121!2.29e-29!102;UBERON:0000924!2.29e-29!102;UBERON:0006601!2.29e-29!102;UBERON:0002346!2.46e-24!71;UBERON:0003075!2.46e-24!71;UBERON:0007284!2.46e-24!71;UBERON:0001049!1.27e-23!52;UBERON:0005068!1.27e-23!52;UBERON:0006241!1.27e-23!52;UBERON:0007135!1.27e-23!52;UBERON:0000033!1.15e-22!63;UBERON:0000955!1.53e-22!50;UBERON:0006238!1.53e-22!50;UBERON:0002616!6.05e-22!49;UBERON:0002020!2.22e-20!34;UBERON:0003056!2.36e-19!49;UBERON:0003080!2.11e-17!40;UBERON:0002791!2.68e-17!29;UBERON:0003528!2.68e-17!29;UBERON:0001893!2.68e-17!29;UBERON:0002780!6.51e-17!39;UBERON:0001890!6.51e-17!39;UBERON:0006240!6.51e-17!39;UBERON:0007811!2.97e-13!86;UBERON:0000956!2.12e-12!21;UBERON:0001869!2.12e-12!21;UBERON:0000203!2.12e-12!21;UBERON:0000153!4.68e-12!94;UBERON:0002619!1.27e-10!17;UBERON:0000025!4.97e-09!114;UBERON:0004111!2.90e-08!122;UBERON:0002021!9.30e-08!10;UBERON:0000411!9.30e-08!10;UBERON:0001950!9.30e-08!10;UBERON:0003076!7.44e-07!12;UBERON:0003057!7.44e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.68e-34,75;UBERON:0001017,6.27e-33,73;UBERON:0004121,1.74e-31,95;UBERON:0000924,1.74e-31,95;UBERON:0006601,1.74e-31,95;UBERON:0002346,4.18e-27,64;UBERON:0003075,4.18e-27,64;UBERON:0007284,4.18e-27,64;UBERON:0010314,2.41e-26,92;UBERON:0000073,3.44e-25,54;UBERON:0001049,1.27e-23,52;UBERON:0005068,1.27e-23,52;UBERON:0006241,1.27e-23,52;UBERON:0007135,1.27e-23,52;UBERON:0010371,1.50e-23,73;UBERON:0000955,1.93e-20,47;UBERON:0006238,1.93e-20,47;UBERON:0002020,2.22e-20,34;UBERON:0002616,7.44e-20,46;UBERON:0003056,2.36e-19,49;UBERON:0003080,2.11e-17,40;UBERON:0003528,2.68e-17,29;UBERON:0002791,2.68e-17,29;UBERON:0001893,2.68e-17,29;UBERON:0002780,6.51e-17,39;UBERON:0001890,6.51e-17,39;UBERON:0006240,6.51e-17,39;UBERON:0000956,2.12e-12,21;UBERON:0001869,2.12e-12,21;UBERON:0000203,2.12e-12,21;UBERON:0002619,1.27e-10,17;UBERON:0000025,4.97e-09,114;UBERON:0004111,2.90e-08,122;UBERON:0002021,9.30e-08,10;UBERON:0000411,9.30e-08,10;UBERON:0001950,9.30e-08,10;UBERON:0003076,7.44e-07,12;UBERON:0003057,7.44e-07,12
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955282134,22.3651413839534,23.5451642991527,24.8815072257218,25.9851450857951,25.4893614667311,25.9531850977555,25.9138382564189,22.4233903794802,13.0481255748254,6.20062232552609,19.8857006238492,17.7040584789094,27.4176175565107,21.8280101677366,18.247261553004,18.0730147514461,22.2649498083155,17.9309478967966,10.3881171955183,12.0972602628303,17.3806116345498,19.4616206678558,14.5849559174055,15.3306571113798,15.3962958274034,18.0800032850951,22.1159627116743,21.8580500218374,20.5971557894221,20.652044603505,20.4677155827786,22.4153125701431,24.822655143205,26.7648105995793,28.5680283355166,14.4290869693142,14.6233586273445,21.489230894602,38.0583500243415,28.7154187440308,22.3444981606063,36.8713612015993,22.069172577556,241.713788640104,239.369122983732,224.575041268243,272.559147197089,216.486076247523,247.769198343822,212.632087573019,192.737474979966,190.319811773366,219.530372182772,40.7884276005814,47.8829848081237,39.7809301407133,31.6038732188782,38.5688219235487,41.9163199266032,37.7819437262746,36.2621700740454,31.4500825399979,36.6410957057506,32.6988296858409,44.1385638843418,53.375659257833,47.3145876271984,48.9924550191381,45.7241943631751,50.8732190897916,48.6131235568537,50.6865657988067,43.8652782000504,39.7728332767082,38.5122499365762,43.6338227603597,43.8946178229632,47.0546902076653,39.5150218854129,43.5368575437199,34.9882716212331,52.8278002860402,30.8628249411756,43.4204166334477,46.3956111988904,52.3815735257202,54.53776809746,38.7742288072094,56.2073800360378,36.2593993090383,32.6604002153413,38.8315314099752,28.676884485537,22.02744438394
|phase1_expression=24.3426247599287,22.6834014965585,24.1149596876454,40.2277401038084,29.0519523368881,19.1382369979554,17.2873354040689,22.2092116319511,13.2341398822567,14.7460651582856,17.635450727227,20.9003056567781,22.9408978107816,24.6525534821573,16.6554880907831,11.5410902412201,14.6907994406911,19.7163853348899,20.0187073064379,22.9170411970936,60.3807360072595,15.0922245825346,14.8883879809193,13.1193786690593,13.7645568640302,18.3754228516806,13.7843838770904,9.04979177280734,13.6816862008589,16.6339885641554,10.4213340007993,19.6859508772486,23.9875267157982,31.6963362030877,10.9763615505484,11.6364251750945,11.4334839506927,12.9744805528441,15.626706890476,15.7057123192139,14.1175557127443,13.6609096991689,12.62326917881,25.5570540490422,26.1552482546348,27.7155595764139,41.4667412504461,44.4771319016111,58.656210790104,56.3846707315422,51.2350303148827,44.5632949531412,16.6104779997159,28.2891235384424,19.4934403502629,46.0494390504345,57.5932214276901,57.7552743350735,213.443866206876,205.248499957549,200.290723507953,66.4135282855499,50.6898033783349,33.7462393980525,28.6771245144423,33.3925654024667,45.8388169093159,51.4852529130883,97.675614794586,108.139756603684,102.217931216772,224.236022756986,204.082531839291,107.424430911515,147.314488955029,142.478911924553,224.636397238753,226.389650425038,225.340784286909,231.19666239103,266.13755523941,228.160056303861,288.675220967428,152.508667318585,208.416809967569,179.13417996799,176.683255871687,163.285914542963,67.7749430331997,65.6716857327966,54.4945238759154,30.1148356943485,4.0798280022465,9.71465744948071,10.3964226791627,10.3046184032387,23.7351070022661,40.7328470961558,38.4483286812246,51.5875778785097,29.4362747333262,47.4807966432976,96.8259910885254,113.770672504533,24.0305055522448,18.4952701796822,30.8369911459018,18.954524033364,21.4918443427153,22.5632051378534,26.7167403219849,24.9661692215956,24.4452427091422,27.8836885022352,28.2212897125692,21.4889871173745,19.5284024510155,19.9547112549478,20.3460426948471,32.3533699894818,22.3049933644997,26.183263669302,24.2309289583559,125.895742714965,136.768699549186,14.0501380364725,13.539109069169,15.5974710058286,9.27612657633372,109.347166765521,101.565133825735,131.937069718508,136.625915671129,157.265006258153,129.659739805165,133.362318241697,37.2732071692158,22.1444407685966,16.9324248150562,30.3036272476523,31.8795085258624,48.2794419310293,54.5588253310208,45.9649694398931,56.8104767913588,56.1138094847642,60.6250157901446,53.8103011137153,24.574751194344,26.0966390631591,23.7534017621331,25.2075092291711,24.7462051810782,27.5119211552512,30.0441919155597,22.2918378836712,7.02213187313235,10.0365683774739,11.6507034752193,27.1334762021507,29.7848096175992,28.0896815879183,34.8014761310259,35.0240332510379,38.2582439960698,36.0427614363132,44.8016580337364,40.7511044861422,49.6970746738711,41.370200947932,49.2087673943344,53.0705954353956,34.688918215986,36.5041459028211,113.977152121757,101.258138581216,23.4597335918497,12.164726066523,21.9686898051291,26.0105072483691,26.4178295710291,22.1851877085677,20.0140239460383,17.8812088545806,23.2519240156811,14.493508015713,16.8394589896181,17.7071260116624,26.5151158482003,18.8752075817387,20.3169766882213,23.1003876975066,19.7254616991205,19.6507441688734,22.5415471346161,19.9578301288408,16.4859614092482,20.8303385074246,24.2195937185905,15.6466756858378,18.5258498852822,15.4246454902251,8.59712618552732,15.3497497258807,13.1694526725846,11.4679677316275,11.3601667977562,8.44120059133459,7.63877555344259,12.6586300478357,7.29608520487659,9.33508804839477,23.0029130443767,12.6527922207291,11.2333562321242,12.6289438973556,7.89348619496414,7.23665282045051,35.2878593218215,25.012866353704,26.4003261836082,19.860175035697,19.9486711045227,31.826188913945,26.8989314201196,44.2953380637203,39.0935157383354,40.7495028953746,55.330804724148,36.5415191816096,40.7536557203514,46.4323478046652,22.6186925908908,35.8977751320348,16.7199852826472,17.6599517635029,147.064340428817,161.283280750872,17.5410391553043,24.4896799388242,55.5294466172612,63.2510765760554,66.3504065017021,43.9702588232696,50.5752990167035,62.2768367735431,57.483119637835,74.5252437673845,76.6858289216256,154.555553198889,24.4136946558222,30.8053494344352,28.6681048462294,25.9003093066881,46.460798418987,19.4224508923985,17.2324427469908,16.0314317792513,18.0134154657271,19.3684143204674,27.3933990758314,25.0838273339479,18.1813662976208,32.8678228253249,33.7339547439996,22.6898195146011,32.0013229408561,29.3499583271036,27.1653235943784,27.6494775190754,27.6650764481947,42.0950409540887,40.3145100475196,44.1474176216169,31.2113371724735,26.6908409288413,18.3038570385618,38.7482694412478,26.1572371247367,27.8042583918798,27.4556391207214,23.6362895632888,24.7758711135373,147.969391004387,15.3783792718067,22.4961686079913,17.2230910453832,12.4323181623096,14.4895881384287,10.7525741407066,13.0883391095269,12.5956307091292,11.0559979043539,21.0027535963325,23.2506955282134,22.3651413839534,23.5451642991527,24.8815072257218,25.9851450857951,25.4893614667311,25.9531850977555,25.9138382564189,22.4233903794802,13.0481255748254,6.20062232552609,19.8857006238492,17.7040584789094,27.4176175565107,21.8280101677366,18.247261553004,18.0730147514461,22.2649498083155,17.9309478967966,10.3881171955183,12.0972602628303,17.3806116345498,19.4616206678558,14.5849559174055,15.3306571113798,15.3962958274034,18.0800032850951,22.1159627116743,21.8580500218374,20.5971557894221,20.652044603505,20.4677155827786,22.4153125701431,24.822655143205,26.7648105995793,28.5680283355166,14.4290869693142,14.6233586273445,21.489230894602,38.0583500243415,28.7154187440308,22.3444981606063,36.8713612015993,22.069172577556,241.713788640104,239.369122983732,224.575041268243,272.559147197089,216.486076247523,247.769198343822,212.632087573019,192.737474979966,190.319811773366,219.530372182772,40.7884276005814,47.8829848081237,39.7809301407133,31.6038732188782,38.5688219235487,41.9163199266032,37.7819437262746,36.2621700740454,31.4500825399979,36.6410957057506,32.6988296858409,44.1385638843418,53.375659257833,47.3145876271984,48.9924550191381,45.7241943631751,50.8732190897916,48.6131235568537,50.6865657988067,43.8652782000504,39.7728332767082,38.5122499365762,43.6338227603597,43.8946178229632,47.0546902076653,39.5150218854129,43.5368575437199,34.9882716212331,52.8278002860402,30.8628249411756,43.4204166334477,46.3956111988904,52.3815735257202,54.53776809746,38.7742288072094,56.2073800360378,36.2593993090383,32.6604002153413,38.8315314099752,28.676884485537,22.02744438394
|short_description=p1@Klc1
}}
}}

Latest revision as of 08:53, 26 September 2015

Short description:p1@Klc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Klc1_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_ENSMUST00000021717, ENSMUST00000069328, ENSMUST00000084941, ENSMUST00000084942, NM_001025360, NM_001081959, NM_008450, uc007pdv.1, uc007pdw.1, uc007pdx.1_5end
EntrezGene:Klc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Klc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G724.34
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I522.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I624.11
CD326+ enterocyte, pool1.CNhs13542.11848-124I340.23
CD326+ enterocyte, pool2.CNhs13197.11849-124I429.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I719.14
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.29
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E922.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E713.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E617.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F120.90
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E422.94
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E824.65
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A116.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A311.54
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A514.69
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A219.72
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A420.02
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A622.92
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A360.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H215.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I914.89
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D113.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D213.76
GP2+ M cell, pool1.CNhs13228.11845-124H918.38
GP2+ M cell, pool2.CNhs13231.11846-124I113.78
GP2+ M cell, pool3.CNhs13240.11847-124I29.05
Ileum epithelium, pool1.CNhs13199.10252-104B913.68
Ileum epithelium, pool2.CNhs13232.10253-104C116.63
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I319.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G623.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.98
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.64
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H115.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H315.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G914.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H213.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H412.62
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D825.56
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D926.16
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B327.72
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B741.47
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C244.48
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B858.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C356.38
Mouse Astrocytes, donor2.CNhs12078.11552-120C451.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C444.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A216.61
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I928.29
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A119.49
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C146.05
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E157.59
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C557.76
Mouse Granule cells, donor1.CNhs12131.11713-123C3213.44
Mouse Granule cells, donor2.CNhs12357.11731-123E3205.25
Mouse Granule cells, donor3.CNhs12108.11636-122C7200.29
Mouse Meningeal cells, donor1.CNhs12132.11716-123C666.41
Mouse Meningeal cells, donor3.CNhs12109.11639-122D150.69
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C733.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E728.68
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D233.39
Mouse Microglia, donor1.CNhs12629.11718-123C845.84
Mouse Microglia, donor2.CNhs12634.11736-123E851.49
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D597.68
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5108.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9102.22
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1224.24
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5204.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2107.42
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2147.31
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6142.48
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3224.64
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3226.39
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7225.34
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4231.20
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4266.14
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8228.16
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4288.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5152.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6208.42
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6179.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6176.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1163.29
Mouse Schwann, donor1.CNhs12507.11728-123D967.77
Mouse Schwann, donor2.CNhs12573.11746-123F965.67
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G354.49
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F730.11
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.71
Mouse hepatocyte, donor6.CNhs13090.11822-124F410.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F610.30
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A723.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I740.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E338.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I851.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G629.44
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H147.48
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I896.83
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6113.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G124.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G218.50
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G330.84
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B618.95
accessory axillary lymph node, adult.CNhs10475.1063-29H921.49
adrenal gland, adult.CNhs10508.49-24D722.56
adrenal gland, embryo E14.CNhs11038.406-44C526.72
adrenal gland, embryo E16.CNhs11004.1254-43D624.97
adrenal gland, embryo E17.CNhs11043.1263-45I124.45
adrenal gland, embryo E18.CNhs11026.1262-18F527.88
adrenal gland, neonate N00.CNhs11191.1311-23C128.22
adrenal gland, neonate N25.CNhs11223.1377-27I321.49
amnion, adult pregnant day17.5.CNhs10488.583-22A819.53
aorta, adult.CNhs10498.46-23H119.95
bone (os femoris), adult.CNhs10483.56-12G220.35
bone (os femoris), neonate N02.CNhs11227.1985-43F532.35
bone (os femoris), neonate N16.CNhs11225.1525-43A622.30
bone (os femoris), neonate N20.CNhs11195.1350-25C326.18
cecum, adult.CNhs10467.37-13H424.23
cerebellum, adult.CNhs10494.15-8B2125.90
cerebellum, neonate N30.CNhs11135.1395-42I2136.77
colon, adult.CNhs10468.36-18H714.05
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C713.54
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D115.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.28
corpora quadrigemina, adult.CNhs10501.16-22A4109.35
corpus striatum, adult.CNhs10487.19-21D8101.57
corpus striatum, neonate N00.CNhs11226.630-43F1131.94
cortex, adult.CNhs10473.12-14D5136.63
cortex, neonate N30.CNhs11107.1392-42F2157.27
diencephalon, adult.CNhs10482.20-12F2129.66
diencephalon, neonate N30.CNhs11201.1388-42B2133.36
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B137.27
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A222.14
epididymis, adult.CNhs10490.58-23B216.93
eyeball, adult.CNhs10484.31-12G430.30
eyeball, embryo E12.CNhs11016.345-16C631.88
eyeball, embryo E14.CNhs10521.399-16E248.28
eyeball, embryo E15.CNhs10593.426-16C954.56
eyeball, embryo E17.CNhs11023.1261-18D445.96
eyeball, neonate N00.CNhs11207.633-15C656.81
eyeball, neonate N01.CNhs11140.1532-43E756.11
eyeball, neonate N02.CNhs11205.1551-44G860.63
eyeball, neonate N16.CNhs11188.777-19A253.81
forelimb, embryo E11.CNhs10596.335-25E224.57
forelimb, embryo E12.CNhs10600.359-14H226.10
forelimb, embryo E13.CNhs10589.384-1E223.75
forelimb, embryo E14.CNhs10577.413-26A825.21
forelimb, embryo E15.CNhs11007.437-20E724.75
forelimb, embryo E17.CNhs10598.1517-43C427.51
forelimb, embryo E18.CNhs11008.1520-43B530.04
gonad, embryo E13.CNhs11044.1564-45I622.29
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.02
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D210.04
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D511.65
heart, embryo E11.CNhs10586.331-24E927.13
heart, embryo E12.CNhs11015.353-12F529.78
heart, embryo E13.CNhs11013.376-3I928.09
heart, embryo E14.CNhs10597.403-26D434.80
heart, embryo E15.CNhs11017.431-16C835.02
heart, embryo E16.CNhs11021.457-17C638.26
heart, embryo E17.CNhs11025.479-18E536.04
heart, embryo E18.CNhs11030.1283-20G344.80
heart, neonate N00.CNhs11213.639-21E340.75
heart, neonate N03.CNhs11221.1349-25I249.70
heart, neonate N10.CNhs11118.749-24G141.37
heart, neonate N16.CNhs11209.782-15G149.21
heart, neonate N20.CNhs11127.821-26I653.07
heart, neonate N25.CNhs11196.1351-25D334.69
heart, neonate N30.CNhs11202.1390-42D236.50
hippocampus, adult.CNhs10478.13-16E8113.98
hippocampus, neonate N00.CNhs11228.627-43G1101.26
intestinal mucosa, adult.CNhs10506.860-29I323.46
intestine, adult.CNhs10496.178-9A312.16
intestine, embryo E12.CNhs11019.1251-16I521.97
intestine, embryo E13.CNhs11010.381-16D526.01
intestine, embryo E15.CNhs10602.976-16D826.42
intestine, embryo E16.CNhs10585.463-22H422.19
intestine, embryo E17.CNhs10582.482-18D320.01
intestine, embryo E18.CNhs10526.1289-20F717.88
intestine, neonate N00.CNhs11126.644-26D123.25
intestine, neonate N01.CNhs11192.1322-23E914.49
intestine, neonate N06.CNhs11102.688-20B816.84
intestine, neonate N07.CNhs11095.720-20F217.71
intestine, neonate N10.CNhs11098.755-23A526.52
intestine, neonate N20.CNhs11187.827-18D118.88
intestine, neonate N25.CNhs11121.1352-25E320.32
intestine, neonate N30.CNhs11131.1384-42G123.10
kidney, embryo E14.CNhs10606.411-4I919.73
kidney, embryo E15.CNhs10997.434-16F819.65
kidney, embryo E16.CNhs10584.464-22A522.54
kidney, embryo E17.CNhs11028.483-18I219.96
kidney, embryo E18.CNhs11001.1288-20C716.49
kidney, neonate N00.CNhs11214.646-21G720.83
kidney, neonate N10.CNhs11206.758-6D524.22
kidney, neonate N20.CNhs11113.832-19I115.65
kidney, neonate N25.CNhs11122.1353-25F318.53
kidney, neonate N30.CNhs11203.1385-42H115.42
liver, adult pregnant day01.CNhs10466.508-5B28.60
liver, embryo E12.CNhs10601.355-15F815.35
liver, embryo E13.CNhs10524.378-3H613.17
liver, embryo E14.CNhs10594.409-16E111.47
liver, embryo E15.CNhs10520.433-16D711.36
liver, embryo E16.CNhs10523.462-17F58.44
liver, embryo E17.CNhs10510.481-18A37.64
liver, embryo E18.CNhs10579.499-43G412.66
liver, neonate N00.CNhs11117.641-24F47.30
liver, neonate N03.CNhs11123.1345-25G29.34
liver, neonate N06.CNhs11101.684-20A823.00
liver, neonate N07.CNhs11103.716-20H212.65
liver, neonate N10.CNhs11115.751-24B911.23
liver, neonate N20.CNhs11220.823-25A312.63
liver, neonate N25.CNhs11198.1368-26H17.89
liver, neonate N30.CNhs11106.1382-42D17.24
lung, adult.CNhs10474.28-22B135.29
lung, embryo E12.CNhs10522.354-16G225.01
lung, embryo E14.CNhs10604.404-26F826.40
lung, embryo E15.CNhs11020.432-17C519.86
lung, embryo E16.CNhs10998.458-17B619.95
lung, embryo E17.CNhs10605.480-44A631.83
lung, embryo E18.CNhs10583.1287-20I626.90
lung, neonate N00.CNhs11224.640-42C644.30
lung, neonate N06.CNhs11212.683-20E539.09
lung, neonate N07.CNhs11111.715-19A340.75
lung, neonate N10.CNhs11219.750-23E655.33
lung, neonate N20.CNhs11109.822-18A436.54
lung, neonate N25.CNhs11119.1359-25C740.75
lung, neonate N30.CNhs11133.1394-42H246.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A122.62
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A135.90
mammary gland, adult lactating day02.CNhs10480.595-22B616.72
mammary gland, adult pregnant day19.CNhs10476.588-5H217.66
medulla oblongata, adult.CNhs10477.17-12C2147.06
medulla oblongata, neonate N30.CNhs11200.1396-42A3161.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C717.54
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C224.49
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E155.53
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E263.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E366.35
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D743.97
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D850.58
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D962.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D457.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D574.53
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D676.69
olfactory brain, adult.CNhs10489.18-22I9154.56
ovary, adult.CNhs10507.91-2I724.41
ovary, embryo E18.CNhs11040.505-44H730.81
ovary, neonate N00.CNhs11217.1299-22I428.67
oviduct, adult pregnant day01.CNhs10500.988-6G625.90
pancreas, adult.CNhs10486.34-16E446.46
pancreas, embryo E14.CNhs11012.405-44F419.42
pancreas, embryo E15.CNhs11042.1556-45F217.23
pancreas, embryo E16.CNhs11003.460-26E516.03
pancreas, embryo E17.CNhs10599.1558-45G318.01
pancreas, embryo E18.CNhs10580.1535-43I719.37
pancreas, neonate N00.CNhs11105.645-26G927.39
pancreas, neonate N01.CNhs11138.1531-43D725.08
pancreas, neonate N02.CNhs11139.1539-43D818.18
pancreas, neonate N16.CNhs11136.787-43B632.87
pancreas, neonate N25.CNhs11094.1555-45E233.73
pancreas, neonate N30.CNhs11182.1548-44H522.69
pituitary gland, adult.CNhs10493.21-1G832.00
pituitary gland, embryo E12.CNhs11018.346-16E629.35
pituitary gland, embryo E13.CNhs11009.370-44C727.17
pituitary gland, embryo E14.CNhs11037.398-44A527.65
pituitary gland, embryo E15.CNhs10592.427-16B927.67
pituitary gland, embryo E16.CNhs11036.449-43F642.10
pituitary gland, embryo E17.CNhs11039.1265-44F540.31
pituitary gland, neonate N00.CNhs11190.1308-22E944.15
placenta, adult pregnant day10.CNhs10472.539-13I731.21
placenta, adult pregnant day17.CNhs10464.577-18G326.69
prostate, adult.CNhs10470.859-1F818.30
skin, adult.CNhs10492.30-1C338.75
skin, neonate N00.CNhs11124.650-25G426.16
skin, neonate N03.CNhs11215.662-22H327.80
skin, neonate N06.CNhs11097.693-20I527.46
skin, neonate N10.CNhs11108.762-6C423.64
small intestine, neonate N16.CNhs11114.790-21I124.78
spinal cord, adult.CNhs10505.24-13C9147.97
spleen, adult.CNhs10465.25-2G215.38
spleen, embryo E16.CNhs11035.461-43C122.50
spleen, embryo E18.CNhs11011.1271-21F217.22
spleen, neonate N10.CNhs11116.752-24D112.43
spleen, neonate N20.CNhs11112.824-19H114.49
spleen, neonate N25.CNhs11099.1354-25G310.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.09
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C912.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.06
stomach, adult.CNhs10503.33-1H621.00
stomach, embryo E12.CNhs10588.356-43E323.25
stomach, embryo E15.CNhs10603.1252-16G822.37
stomach, embryo E16.CNhs11022.459-17D423.55
stomach, embryo E17.CNhs11006.1035-18D524.88
stomach, embryo E18.CNhs10999.1286-20C625.99
stomach, neonate N03.CNhs11193.1340-24B825.49
stomach, neonate N07.CNhs11210.718-18A925.95
stomach, neonate N25.CNhs11104.1355-25E425.91
stomach, neonate N30.CNhs11134.1386-42I122.42
submandibular gland, adult.CNhs10469.59-29C113.05
testis, adult.CNhs10504.57-7G56.20
testis, embryo E13.CNhs11031.389-23F519.89
testis, embryo E15.CNhs11034.443-27C517.70
testis, embryo E16.CNhs11033.470-26G527.42
testis, embryo E17.CNhs11029.486-18I521.83
testis, embryo E18.CNhs11027.503-18G518.25
testis, neonate N00.CNhs11189.1300-22B718.07
testis, neonate N07.CNhs11222.726-26I422.26
testis, neonate N10.CNhs11204.763-44D917.93
testis, neonate N20.CNhs11110.839-18H310.39
testis, neonate N30.CNhs11130.1391-42E212.10
thymus, adult.CNhs10471.38-12B517.38
thymus, embryo E14.CNhs11041.402-44I419.46
thymus, embryo E15.CNhs11005.430-45I214.58
thymus, embryo E16.CNhs11002.456-26C515.33
thymus, embryo E17.CNhs10581.478-18C115.40
thymus, embryo E18.CNhs10595.1273-19G418.08
thymus, neonate N02.CNhs11181.1541-43F822.12
thymus, neonate N03.CNhs11137.2104-43C721.86
thymus, neonate N06.CNhs11197.681-26C420.60
thymus, neonate N07.CNhs11211.713-19D320.65
thymus, neonate N10.CNhs11194.748-24E420.47
thymus, neonate N20.CNhs11186.820-7A222.42
thymus, neonate N25.CNhs11125.1362-25G724.82
thymus, neonate N30.CNhs11132.1393-42G226.76
tongue, adult.CNhs10499.32-1B428.57
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H314.43
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.62
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G521.49
urinary bladder, adult.CNhs10481.879-12E438.06
uterus, adult pregnant day19.CNhs10497.590-15F528.72
uterus, adult.CNhs10509.92-27E522.34
vagina, adult.CNhs10502.89-27D536.87
vesicular gland, adult.CNhs10491.51-27F822.07
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1241.71
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2239.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3224.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7272.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4216.49
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5247.77
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6212.63
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7192.74
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8190.32
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9219.53
whole body, embryo E11.CNhs11014.324-5I840.79
whole body, embryo E12.CNhs10587.857-27C947.88
whole body, embryo E13.CNhs10512.372-23H239.78
whole body, embryo E14.5.CNhs10578.420-27D231.60
whole body, embryo E14.CNhs10519.395-14B138.57
whole body, embryo E16.CNhs10514.453-14F241.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G537.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G536.26
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G531.45
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G536.64
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G532.70
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G544.14
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G553.38
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G547.31
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G548.99
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G545.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G550.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G548.61
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G550.69
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G543.87
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G539.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G538.51
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G543.63
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G543.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G547.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G539.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G543.54
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G534.99
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G552.83
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G530.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G543.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G546.40
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G552.38
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G554.54
whole body, embryo E17.5.CNhs10513.490-9F938.77
whole body, embryo E17.CNhs10517.475-3I556.21
whole body, embryo E18.CNhs10516.493-3B336.26
whole body, neonate N00.CNhs10525.657-19C232.66
whole body, neonate N01.CNhs10576.659-23C638.83
whole body, neonate N06.CNhs10515.692-21D128.68
whole body, neonate N10.CNhs10518.761-6B422.03





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell1.67e-1943
ectodermal cell2.82e-1944
neurectodermal cell2.82e-1944
neuron7.84e-1733
neuronal stem cell7.84e-1733
neuroblast7.84e-1733
electrically signaling cell7.84e-1733
electrically responsive cell1.49e-1639
electrically active cell1.49e-1639
CNS neuron (sensu Vertebrata)1.52e-1423
neuroblast (sensu Vertebrata)1.52e-1423
embryonic cell3.43e-1170

Uber anatomy
Ontology termp-valuen
nervous system5.68e-3475
central nervous system6.27e-3373
ectoderm-derived structure1.74e-3195
ectoderm1.74e-3195
presumptive ectoderm1.74e-3195
neurectoderm4.18e-2764
neural plate4.18e-2764
presumptive neural plate4.18e-2764
structure with developmental contribution from neural crest2.41e-2692
regional part of nervous system3.44e-2554
neural tube1.27e-2352
neural rod1.27e-2352
future spinal cord1.27e-2352
neural keel1.27e-2352
ecto-epithelium1.50e-2373
brain1.93e-2047
future brain1.93e-2047
gray matter2.22e-2034
regional part of brain7.44e-2046
pre-chordal neural plate2.36e-1949
anterior neural tube2.11e-1740
brain grey matter2.68e-1729
regional part of telencephalon2.68e-1729
telencephalon2.68e-1729
regional part of forebrain6.51e-1739
forebrain6.51e-1739
future forebrain6.51e-1739
cerebral cortex2.12e-1221
cerebral hemisphere2.12e-1221
pallium2.12e-1221
regional part of cerebral cortex1.27e-1017
tube4.97e-09114
anatomical conduit2.90e-08122
occipital lobe9.30e-0810
visual cortex9.30e-0810
neocortex9.30e-0810
posterior neural tube7.44e-0712
chordal neural plate7.44e-0712
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