FFCP PHASE1:Mm9::chr1:134288274..134288339,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68875 | |EntrezGene=68875 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q80W04 | |UniProt=Q80W04 | ||
|association_with_transcript=-416bp_to_ENSMUST00000045473,NM_178874,uc007cot.1_5end | |association_with_transcript=-416bp_to_ENSMUST00000045473,NM_178874,uc007cot.1_5end | ||
|cluster_id=chr1:134288274..134288339,- | |||
|description=CAGE_peak_2_at_Tmcc2_5end | |description=CAGE_peak_2_at_Tmcc2_5end | ||
|id=chr1:134288274..134288339,- | |id=chr1:134288274..134288339,- | ||
|ontology_enrichment_celltype=CL:0000540!1.42e-16!33;CL:0000047!1.42e-16!33;CL:0000031!1.42e-16!33;CL:0000404!1.42e-16!33;CL:0000221!2.12e-14!44;CL:0000133!2.12e-14!44;CL:0000393!4.44e-14!39;CL:0000211!4.44e-14!39;CL:0002319!5.86e-14!43;CL:0000117!1.04e-13!23;CL:0000337!1.04e-13!23;CL:0000055!8.30e-12!50 | |ontology_enrichment_celltype=CL:0000540!1.42e-16!33;CL:0000047!1.42e-16!33;CL:0000031!1.42e-16!33;CL:0000404!1.42e-16!33;CL:0000221!2.12e-14!44;CL:0000133!2.12e-14!44;CL:0000393!4.44e-14!39;CL:0000211!4.44e-14!39;CL:0002319!5.86e-14!43;CL:0000117!1.04e-13!23;CL:0000337!1.04e-13!23;CL:0000055!8.30e-12!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.17e-16,33;CL:0000047,1.17e-16,33;CL:0000031,1.17e-16,33;CL:0000404,1.17e-16,33;CL:0000221,1.80e-14,44;CL:0000133,1.80e-14,44;CL:0000393,3.79e-14,39;CL:0000211,3.79e-14,39;CL:0002319,5.01e-14,43;CL:0000117,8.93e-14,23;CL:0000337,8.93e-14,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.77e-31!73;UBERON:0005743!6.77e-31!73;UBERON:0000073!2.64e-30!75;UBERON:0001016!2.64e-30!75;UBERON:0004121!9.27e-25!102;UBERON:0000924!9.27e-25!102;UBERON:0006601!9.27e-25!102;UBERON:0001049!1.09e-22!52;UBERON:0005068!1.09e-22!52;UBERON:0006241!1.09e-22!52;UBERON:0007135!1.09e-22!52;UBERON:0000033!1.26e-22!63;UBERON:0002346!5.47e-22!71;UBERON:0003075!5.47e-22!71;UBERON:0007284!5.47e-22!71;UBERON:0000955!1.10e-21!50;UBERON:0006238!1.10e-21!50;UBERON:0002616!4.78e-21!49;UBERON:0003056!2.21e-17!49;UBERON:0002020!3.33e-17!34;UBERON:0003080!6.12e-17!40;UBERON:0002780!2.90e-16!39;UBERON:0001890!2.90e-16!39;UBERON:0006240!2.90e-16!39;UBERON:0004111!1.12e-14!122;UBERON:0000025!1.34e-14!114;UBERON:0002791!3.05e-14!29;UBERON:0003528!3.05e-14!29;UBERON:0001893!3.05e-14!29;UBERON:0000956!1.16e-09!21;UBERON:0001869!1.16e-09!21;UBERON:0000203!1.16e-09!21;UBERON:0007811!3.74e-08!86;UBERON:0002619!7.57e-08!17;UBERON:0000153!1.34e-07!94;UBERON:0000468!3.26e-07!333 | |ontology_enrichment_uberon=UBERON:0001017!6.77e-31!73;UBERON:0005743!6.77e-31!73;UBERON:0000073!2.64e-30!75;UBERON:0001016!2.64e-30!75;UBERON:0004121!9.27e-25!102;UBERON:0000924!9.27e-25!102;UBERON:0006601!9.27e-25!102;UBERON:0001049!1.09e-22!52;UBERON:0005068!1.09e-22!52;UBERON:0006241!1.09e-22!52;UBERON:0007135!1.09e-22!52;UBERON:0000033!1.26e-22!63;UBERON:0002346!5.47e-22!71;UBERON:0003075!5.47e-22!71;UBERON:0007284!5.47e-22!71;UBERON:0000955!1.10e-21!50;UBERON:0006238!1.10e-21!50;UBERON:0002616!4.78e-21!49;UBERON:0003056!2.21e-17!49;UBERON:0002020!3.33e-17!34;UBERON:0003080!6.12e-17!40;UBERON:0002780!2.90e-16!39;UBERON:0001890!2.90e-16!39;UBERON:0006240!2.90e-16!39;UBERON:0004111!1.12e-14!122;UBERON:0000025!1.34e-14!114;UBERON:0002791!3.05e-14!29;UBERON:0003528!3.05e-14!29;UBERON:0001893!3.05e-14!29;UBERON:0000956!1.16e-09!21;UBERON:0001869!1.16e-09!21;UBERON:0000203!1.16e-09!21;UBERON:0007811!3.74e-08!86;UBERON:0002619!7.57e-08!17;UBERON:0000153!1.34e-07!94;UBERON:0000468!3.26e-07!333 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.67e-31,73;UBERON:0001016,1.84e-30,75;UBERON:0004121,1.74e-26,95;UBERON:0000924,1.74e-26,95;UBERON:0006601,1.74e-26,95;UBERON:0002346,1.62e-24,64;UBERON:0003075,1.62e-24,64;UBERON:0007284,1.62e-24,64;UBERON:0000073,2.42e-24,54;UBERON:0001049,8.33e-23,52;UBERON:0005068,8.33e-23,52;UBERON:0006241,8.33e-23,52;UBERON:0007135,8.33e-23,52;UBERON:0010371,2.92e-21,73;UBERON:0010314,3.81e-20,92;UBERON:0000955,1.38e-19,47;UBERON:0006238,1.38e-19,47;UBERON:0002616,5.82e-19,46;UBERON:0003056,1.81e-17,49;UBERON:0002020,2.73e-17,34;UBERON:0003080,5.04e-17,40;UBERON:0002780,2.41e-16,39;UBERON:0001890,2.41e-16,39;UBERON:0006240,2.41e-16,39;UBERON:0004111,1.60e-14,122;UBERON:0000025,1.93e-14,114;UBERON:0003528,2.60e-14,29;UBERON:0002791,2.60e-14,29;UBERON:0001893,2.60e-14,29;UBERON:0000956,1.05e-09,21;UBERON:0001869,1.05e-09,21;UBERON:0000203,1.05e-09,21;UBERON:0002619,7.00e-08,17 | |||
|phase1_expression=31.2290251854348,0,0.454999239389536,0,0.500895729946347,0.16787927191189,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,10.9926221399169,15.1856450542369,21.6864182219725,0.473193248037357,0.411343300817216,0.42438965179803,14.627445905984,0.0992909512008853,0,0,0,0,0,0,0,0,0,2.54012269383853,3.07532393792285,0,0,0,0,0,1.5626706890476,0,0,0,0,6.04304726282771,5.06884656097573,3.12029478674859,8.60630478782843,2.61630187656536,3.29529274101708,4.27745777963423,4.61955191363696,2.87505128729943,0,0,0,2.57259436035947,4.01146815914259,4.64104883049698,33.7868489635528,38.0873505075864,34.8607271928399,4.06613438482959,2.66788438833342,3.5995988691256,1.97773272513395,4.2628806896766,10.4860038681442,10.7581125490035,17.8346133170582,19.7108669964268,20.1911962897327,62.2719146000292,46.6032621407905,18.741092279888,21.9486128631761,19.3035945188104,78.182275509566,83.5075191077128,93.392772219796,27.3004615601501,33.8504281328916,28.129322010065,112.510748597557,61.9038871034848,68.6064132517877,40.6587447953661,36.4471502845704,32.9927019110782,4.31639301999149,4.6854367266207,12.7540375028738,2.58127163094416,0.679971333707751,0,0,0.448026887097336,7.02222100658759,3.91989741929533,2.59786004602869,3.88673531961374,19.858922188512,0,7.64415719119937,7.11066703153331,0.432982082022428,0.253359865475099,0,4.33898742932428,1.8125651855302,5.78924342352817,5.89850111004862,4.56698217468212,4.15107895060905,2.71300752994721,3.52766121407114,2.63899841792318,1.48316980640624,2.89198713839823,14.153768831198,6.79420769779119,8.39197770149496,6.78825354389311,3.72783522436244,38.0615036115011,53.408910237431,0.255457055208591,1.91704199209472,0.599902730993408,1.65191295194984,68.7539034868136,62.2200819833332,25.3821791267986,54.2331878999903,42.9601968314955,69.8167829720122,42.182728397617,6.21220119486929,6.34475550111474,2.27450482590307,7.15502310014011,5.85541993332167,6.43725892413724,9.54329287968351,7.83665052745718,9.11689088627793,7.43059577652129,11.6190138454064,9.05461797586555,3.23351989399263,6.61871280587367,5.10258260075452,7.01426343768239,3.05851974148158,5.57203466435466,4.7329891373827,4.37875387000685,2.1066395619397,1.02939162845886,0.568326998791185,4.76389276831654,1.87620847984877,3.6012412292203,5.91861838963026,3.54175617145327,4.01094493507183,5.58081467400979,3.75582761959467,3.50296027101508,3.94943639792353,3.77585167381919,8.26901857367728,8.62579925809461,7.68425403518677,8.58921080066379,64.3487242606229,24.8000115834075,0,1.05780226665418,4.69234151177515,3.0190767341857,5.28356591420583,3.63030344322017,3.55804870151792,2.47293313946327,2.37264530772256,2.79988223030818,2.5133520880027,2.58643413653496,2.33956904542944,1.79763881730844,1.72910439899755,0.199141273254367,4.74169752382704,2.85621281524322,5.63538678365402,4.2766778847516,3.10323979468201,2.80543279561274,2.02356918797623,1.62371162777562,2.04098346193787,1.85095745882701,1.77871576252289,6.50695912292767,9.04171377520734,9.44420872016386,14.4030686185837,9.88826354984909,11.2035374783825,10.3570609482292,7.45822043165163,3.56929837144506,5.75072826109418,2.60498663367952,1.87222603868736,0.757736633841335,1.61457672169721,0.482443521363367,17.5515530658274,3.60033682363921,3.42226450528254,3.05541154395339,2.34690248288502,6.365237782789,9.52174563544055,15.0252908850505,9.61574379047765,15.2810635857655,10.5240147313941,16.3863314715738,17.6138681503213,18.659728557015,3.01582567878545,0.54390568381871,1.47529281905711,0.551873492609465,77.5459349641035,55.7927628178887,6.22952792431367,13.8859009962405,11.9893123378178,13.2749173060857,14.8642144435631,6.93009514062401,11.3627323782021,12.4553673547086,11.7395103485719,19.8733983379692,15.0209355619679,43.378377716944,3.54850213020672,4.80777129901589,5.70104357737516,5.44401405809367,0,2.42780636154981,3.02323556964751,1.50884063804718,4.42952839321159,3.68922177532713,3.10113951801865,3.27180356529755,3.56497378384721,1.58018378967908,1.05418608574999,1.03135543248187,24.5116516142727,4.86164953884538,6.33857550535497,5.35842587578981,8.51233121482913,15.3397183137781,13.8221177305782,10.9607381681256,0.469343416127421,3.81297727554876,4.19003956304428,5.7710188529518,5.16686165426898,2.23157822234177,1.90995750405018,1.64140899745061,1.1659233465194,73.7992702001828,10.9357363710626,3.30218988741156,4.44466865687308,11.6788443342908,9.84198439591381,16.9295848172827,3.56954702987096,2.93898049879682,2.21119958087078,0.954670618015114,4.27053591334533,4.67634774391752,3.78018692876304,3.13632444021703,2.18362563746178,2.83215127408124,2.47960367176008,2.6175594198403,0.518459893167171,1.24267862617385,2.81846469342095,3.28936401296753,3.80554528051325,6.02798683866548,4.39143399824286,4.39285926276023,4.5769323071844,6.11960608766566,1.57289016638566,2.17425708743405,2.01621004380506,0.316011120628178,1.62180172232131,2.05421914329655,0.649604114888975,0.716106782669926,0.79472541912506,0.480781798079875,0.590758108698309,0.2019328998962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| ||
|short_description=p2@Tmcc2 | |short_description=p2@Tmcc2 | ||
}} | }} |
Latest revision as of 09:07, 26 September 2015
Short description: | p2@Tmcc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tmcc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -416bp_to_ENSMUST00000045473, NM_178874, uc007cot.1_5end |
EntrezGene: | Tmcc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.17e-16 | 33 |
neuronal stem cell | 1.17e-16 | 33 |
neuroblast | 1.17e-16 | 33 |
electrically signaling cell | 1.17e-16 | 33 |
ectodermal cell | 1.80e-14 | 44 |
neurectodermal cell | 1.80e-14 | 44 |
electrically responsive cell | 3.79e-14 | 39 |
electrically active cell | 3.79e-14 | 39 |
neural cell | 5.01e-14 | 43 |
CNS neuron (sensu Vertebrata) | 8.93e-14 | 23 |
neuroblast (sensu Vertebrata) | 8.93e-14 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.67e-31 | 73 |
nervous system | 1.84e-30 | 75 |
ectoderm-derived structure | 1.74e-26 | 95 |
ectoderm | 1.74e-26 | 95 |
presumptive ectoderm | 1.74e-26 | 95 |
neurectoderm | 1.62e-24 | 64 |
neural plate | 1.62e-24 | 64 |
presumptive neural plate | 1.62e-24 | 64 |
regional part of nervous system | 2.42e-24 | 54 |
neural tube | 8.33e-23 | 52 |
neural rod | 8.33e-23 | 52 |
future spinal cord | 8.33e-23 | 52 |
neural keel | 8.33e-23 | 52 |
ecto-epithelium | 2.92e-21 | 73 |
structure with developmental contribution from neural crest | 3.81e-20 | 92 |
brain | 1.38e-19 | 47 |
future brain | 1.38e-19 | 47 |
regional part of brain | 5.82e-19 | 46 |
pre-chordal neural plate | 1.81e-17 | 49 |
gray matter | 2.73e-17 | 34 |
anterior neural tube | 5.04e-17 | 40 |
regional part of forebrain | 2.41e-16 | 39 |
forebrain | 2.41e-16 | 39 |
future forebrain | 2.41e-16 | 39 |
anatomical conduit | 1.60e-14 | 122 |
tube | 1.93e-14 | 114 |
brain grey matter | 2.60e-14 | 29 |
regional part of telencephalon | 2.60e-14 | 29 |
telencephalon | 2.60e-14 | 29 |
cerebral cortex | 1.05e-09 | 21 |
cerebral hemisphere | 1.05e-09 | 21 |
pallium | 1.05e-09 | 21 |
regional part of cerebral cortex | 7.00e-08 | 17 |