FFCP PHASE1:Mm9::chr7:25155485..25155539,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16534 | |EntrezGene=16534 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=887 | |||
|TSSclassifier=NA | |||
|UniProt=D1MQ07 | |UniProt=D1MQ07 | ||
|association_with_transcript=29bp_to_ENSMUST00000167851_5end | |association_with_transcript=29bp_to_ENSMUST00000167851_5end | ||
|cluster_id=chr7:25155485..25155539,+ | |||
|description=CAGE_peak_4_at_Kcnn4_5end | |description=CAGE_peak_4_at_Kcnn4_5end | ||
|id=chr7:25155485..25155539,+ | |id=chr7:25155485..25155539,+ | ||
|ontology_enrichment_celltype=CL:0000988!8.28e-09!32;CL:0002032!8.28e-09!32;CL:0000037!8.28e-09!32;CL:0000566!8.28e-09!32;CL:0000837!8.28e-09!32;CL:0002320!3.80e-08!46;CL:0000134!3.80e-08!46;CL:0002031!1.28e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.97e-07,32;CL:0002032,3.97e-07,32;CL:0000037,3.97e-07,32;CL:0000837,3.97e-07,32;CL:0002320,5.80e-07,46;CL:0000134,5.80e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.86e-13!70;UBERON:0002193!5.09e-13!48;UBERON:0002390!3.39e-12!45;UBERON:0003061!3.39e-12!45;UBERON:0002384!3.80e-08!46;UBERON:0005057!9.85e-08!51;UBERON:0004177!3.12e-07!29;UBERON:0001474!4.19e-07!22;UBERON:0004765!4.19e-07!22;UBERON:0001434!4.19e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.99e-15,48;UBERON:0002405,2.99e-15,48;UBERON:0002390,1.87e-14,45;UBERON:0003061,1.87e-14,45;UBERON:0004177,5.81e-10,29;UBERON:0005057,5.81e-10,29;UBERON:0000077,2.39e-09,35;UBERON:0007811,4.17e-08,36;UBERON:0003929,4.31e-08,55;UBERON:0003408,8.38e-08,24;UBERON:0006562,1.66e-07,24;UBERON:0001557,1.66e-07,24;UBERON:0001042,1.66e-07,24;UBERON:0008814,1.66e-07,24;UBERON:0009145,1.66e-07,24;UBERON:0002384,5.80e-07,46;UBERON:0002370,7.19e-07,23;UBERON:0000974,7.19e-07,23;UBERON:0004807,7.19e-07,23;UBERON:0005058,7.19e-07,23;UBERON:0003351,7.19e-07,23;UBERON:0009113,7.19e-07,23;UBERON:0003295,7.19e-07,23;UBERON:0009722,7.19e-07,23;UBERON:0005562,7.19e-07,23;UBERON:0007690,7.19e-07,23 | |||
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|phase1_expression=0.160148847104794,0,0,0,0,0.671517087647559,0.700837921786577,8.26389270026088,0.84473233291,1.40438715793196,0.171217968225505,0.638177271962691,5.64962408772979,5.59490575481583,3.99731714178795,3.44207954562704,6.29605690315332,1.26184866143295,0.822686601634433,2.54633791078818,0.340173160604279,0.496454756004426,0.783599367416806,0.47997726838022,1.83527424853736,0,0.430761996159075,0,0.570070258369122,0.252030129759931,1.33038306393183,0.635030673459631,3.69038872550742,0,3.46621943701529,3.32469290716985,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,3.62681071005672,5.04140698713696,0,0,0,0,0,0,0.677689064138264,0,1.7997994345628,0.988866362566974,2.8419204597844,0.898800331555214,0.768436610643109,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0.559198337475902,1.36307147999731,3.55186332501892,2.6087803983151,1.72084775396277,0,0,0,0,5.89866564553358,0.170430322578058,0.779358013808606,1.06001872353102,1.12674735821344,0,0,0,0.432982082022428,0,0,2.39786147410026,1.55362730188303,0.29688427812965,0.346970653532272,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0.485300549842228,1.54589062922275,2.90925151881133,0,0,0,1.78819938646014,2.99537811264801,0.599902730993408,2.54140454146129,0,0,0,0,0,0,0,0.509196819251581,1.24406970610093,0.252722758433675,41.0361618978624,0,0,0,0.150704817835715,0.0680364991513279,0.384341160854549,1.21812241927647,7.50239775143145,0,0,0,0,0,0.348252166522167,0.205782136407943,0,1.40442637462647,0.51469581422943,2.27330799516474,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.467061369468678,0.329119699826961,0.164167464079095,0.162137619091711,0.292399974850665,0.219550115291051,0,0,0.102904612379284,0,0,0,0.232236671860439,0,0,0.22237804384487,0.380451252225118,0.474529061544512,0,0.754005626400808,0.596869416123452,0.19496408711912,1.79763881730844,0,0.597423819763102,0,0,0,0,0.193952487167626,0.350679099451593,0.0632365371242573,0,0,0.123397163921801,0,2.50267658574141,2.16214894624523,4.94696647246678,2.23146133527353,1.68824011826692,2.03700681425136,0.863088412352432,0.486405680325106,1.37280706594041,0,0.744281895337007,0.936113019343682,0.505157755894224,0,0.482443521363367,0,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0.44292937929755,0.797273843287435,0.163863314715738,0.345369963731791,0.433947175744535,3.01582567878545,0,66.8799411305889,47.1851836181093,0,0,0.163934945376675,0.252470927204373,0,0,0,0.238968797952552,0,0.566153061577665,0,0,0,0,0.283880170416537,0.35613120733451,0.488660878060728,0.824850614862677,0,0,0.604647113929502,0.188605079755898,0.590603785761546,0.614870295887855,0.775284879504663,1.81766864738753,1.78248689192361,1.58018378967908,1.05418608574999,6.18813259489121,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,1.54369878638473,0.49465875882444,0,0.0603129249281559,0,0,0.874442509889552,0,3.2465467351592,1.03193433981611,0.925972636848558,2.82552685507037,4.10082683163076,2.51655990527175,12.5784038195453,6.57771825921193,11.3323978519628,1.90934123603023,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0.539457385539283,1.1571483801547,0.523511883968059,0.518459893167171,74.5607175704311,0,0,0,0.194451188344048,0.258319646955462,0,0,0.39061315453185,0,0,0,2.52808896502543,0,0.205421914329655,1.16928740680016,0.537080087002444,2.78153896693771,1.68273629327956,2.80610101631697,2.22126189885925,2.43861781295999,2.21817607301049,2.72882066071307,4.81059208201647,4.32444538071805,2.0405734525369,0,0,0,0.579568782096571,0.187682475451182,0.549454872801795,0.214368379079066,1.50471631210609,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0.853668028770671,0.729320151204882,0.209613162627982,0.183843508450014,0.222246727801615,1.44224540067226,0.320919209591815,0.252697211763798,0.50695859978048,0.565879024158229,0.561849044819294,0.640251524048693,0.918967503289812,0.476293691283074,0.695305955669133,0.38581844092741,0.824171801606613,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.564656282491984,1.01537529470012,0.73171189149109,0,0.543216455383447,0.561142271657738,0.593175090620871,0.394017929502254,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0.935726433781634,0.859484216193193,0.382576664137687,1.76473135295612,0.463735671240843 | ||
|short_description=p4@Kcnn4 | |short_description=p4@Kcnn4 | ||
}} | }} |
Latest revision as of 09:24, 26 September 2015
Short description: | p4@Kcnn4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Kcnn4_5end |
Coexpression cluster: | MCL_coexpression_mm9:887 |
Association with transcript: | 29bp_to_ENSMUST00000167851_5end |
EntrezGene: | Kcnn4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.97e-07 | 32 |
hematopoietic oligopotent progenitor cell | 3.97e-07 | 32 |
hematopoietic stem cell | 3.97e-07 | 32 |
hematopoietic multipotent progenitor cell | 3.97e-07 | 32 |
connective tissue cell | 5.80e-07 | 46 |
mesenchymal cell | 5.80e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.99e-15 | 48 |
immune system | 2.99e-15 | 48 |
hematopoietic system | 1.87e-14 | 45 |
blood island | 1.87e-14 | 45 |
hemopoietic organ | 5.81e-10 | 29 |
immune organ | 5.81e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 2.39e-09 | 35 |
craniocervical region | 4.17e-08 | 36 |
gut epithelium | 4.31e-08 | 55 |
gland of gut | 8.38e-08 | 24 |
pharynx | 1.66e-07 | 24 |
upper respiratory tract | 1.66e-07 | 24 |
chordate pharynx | 1.66e-07 | 24 |
pharyngeal arch system | 1.66e-07 | 24 |
pharyngeal region of foregut | 1.66e-07 | 24 |
connective tissue | 5.80e-07 | 46 |
thymus | 7.19e-07 | 23 |
neck | 7.19e-07 | 23 |
respiratory system epithelium | 7.19e-07 | 23 |
hemolymphoid system gland | 7.19e-07 | 23 |
pharyngeal epithelium | 7.19e-07 | 23 |
thymic region | 7.19e-07 | 23 |
pharyngeal gland | 7.19e-07 | 23 |
entire pharyngeal arch endoderm | 7.19e-07 | 23 |
thymus primordium | 7.19e-07 | 23 |
early pharyngeal endoderm | 7.19e-07 | 23 |