FFCP PHASE1:Mm9::chr17:37095483..37095499,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66136 | |EntrezGene=66136 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1058 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_ENSMUST00000174466_5end | |association_with_transcript=4bp_to_ENSMUST00000174466_5end | ||
|cluster_id=chr17:37095483..37095499,- | |||
|description=CAGE_peak_3_at_Znrd1_5end | |description=CAGE_peak_3_at_Znrd1_5end | ||
|id=chr17:37095483..37095499,- | |id=chr17:37095483..37095499,- | ||
|ontology_enrichment_celltype=CL:0000988!1.95e-11!32;CL:0002032!1.95e-11!32;CL:0000037!1.95e-11!32;CL:0000566!1.95e-11!32;CL:0000837!1.95e-11!32;CL:0000219!8.45e-10!54;CL:0002320!1.16e-09!46;CL:0000134!1.16e-09!46;CL:0002031!1.11e-08!25;CL:0000063!1.23e-08!66;CL:0000738!1.88e-08!17;CL:0002087!1.88e-08!17;CL:0000838!1.92e-08!12;CL:0000542!3.44e-08!13;CL:0000051!3.44e-08!13;CL:0000084!9.33e-08!11;CL:0000827!9.33e-08!11;CL:0000144!1.25e-07!121;CL:0000012!1.25e-07!121;CL:0000791!5.55e-07!9;CL:0000789!5.55e-07!9;CL:0002420!5.55e-07!9;CL:0002419!5.55e-07!9;CL:0000790!5.55e-07!9 | |ontology_enrichment_celltype=CL:0000988!1.95e-11!32;CL:0002032!1.95e-11!32;CL:0000037!1.95e-11!32;CL:0000566!1.95e-11!32;CL:0000837!1.95e-11!32;CL:0000219!8.45e-10!54;CL:0002320!1.16e-09!46;CL:0000134!1.16e-09!46;CL:0002031!1.11e-08!25;CL:0000063!1.23e-08!66;CL:0000738!1.88e-08!17;CL:0002087!1.88e-08!17;CL:0000838!1.92e-08!12;CL:0000542!3.44e-08!13;CL:0000051!3.44e-08!13;CL:0000084!9.33e-08!11;CL:0000827!9.33e-08!11;CL:0000144!1.25e-07!121;CL:0000012!1.25e-07!121;CL:0000791!5.55e-07!9;CL:0000789!5.55e-07!9;CL:0002420!5.55e-07!9;CL:0002419!5.55e-07!9;CL:0000790!5.55e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.63e-13,32;CL:0002032,2.63e-13,32;CL:0000037,2.63e-13,32;CL:0000837,2.63e-13,32;CL:0002320,6.04e-11,46;CL:0000134,6.04e-11,46;CL:0000838,5.27e-10,12;CL:0002031,6.03e-10,25;CL:0000219,8.11e-10,54;CL:0000542,1.07e-09,13;CL:0000051,1.07e-09,13;CL:0000738,1.88e-09,17;CL:0002087,1.88e-09,17;CL:0000084,3.65e-09,11;CL:0000827,3.65e-09,11;CL:0000791,3.23e-08,9;CL:0000789,3.23e-08,9;CL:0002420,3.23e-08,9;CL:0002419,3.23e-08,9;CL:0000790,3.23e-08,9;CL:0000624,1.82e-07,8;CL:0000034,7.04e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.36e-12!48;UBERON:0002390!1.67e-11!45;UBERON:0003061!1.67e-11!45;UBERON:0002384!1.16e-09!46;UBERON:0003408!1.16e-07!24;UBERON:0002370!2.72e-07!23;UBERON:0000974!2.72e-07!23;UBERON:0004807!2.72e-07!23;UBERON:0005058!2.72e-07!23;UBERON:0003351!2.72e-07!23;UBERON:0009113!2.72e-07!23;UBERON:0003295!2.72e-07!23;UBERON:0009722!2.72e-07!23;UBERON:0005562!2.72e-07!23;UBERON:0007690!2.72e-07!23;UBERON:0004177!3.76e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.83e-14,48;UBERON:0002405,1.83e-14,48;UBERON:0002390,3.84e-13,45;UBERON:0003061,3.84e-13,45;UBERON:0002384,6.04e-11,46;UBERON:0003408,1.18e-10,24;UBERON:0002370,3.46e-10,23;UBERON:0000974,3.46e-10,23;UBERON:0004807,3.46e-10,23;UBERON:0005058,3.46e-10,23;UBERON:0003351,3.46e-10,23;UBERON:0009113,3.46e-10,23;UBERON:0003295,3.46e-10,23;UBERON:0009722,3.46e-10,23;UBERON:0005562,3.46e-10,23;UBERON:0007690,3.46e-10,23;UBERON:0006562,2.13e-09,24;UBERON:0001557,2.13e-09,24;UBERON:0001042,2.13e-09,24;UBERON:0008814,2.13e-09,24;UBERON:0009145,2.13e-09,24;UBERON:0004177,5.64e-09,29;UBERON:0005057,5.64e-09,29;UBERON:0000077,8.66e-09,35;UBERON:0000072,1.10e-08,27 | |||
|phase1_expression=1.12104192973356,5.23463111459042,2.27499619694768,2.41971369045464,3.50627010962443,1.00727563147134,1.40167584357315,9.29687928779349,7.03943610758334,6.78787126333781,7.70480857014772,5.90313976565489,10.2720437958723,8.47977903464275,1.66554880907831,2.83465374345756,0.699561878128147,11.3566379528966,9.04955261797876,10.6097412949508,7.05859308253879,3.07801948722744,3.91799683708403,1.75991665072747,2.98232065387321,3.44539178469012,1.7230479846363,2.15471232685889,1.33016393619462,1.00812051903972,1.77384408524244,0.635030673459631,1.23012957516914,0,0.866554859253824,0.831173226792462,0.408338712524738,5.85944283031671,8.5946887897618,5.75876118371178,5.88231488031014,8.87959130445979,4.36959317728038,0.755380907853464,1.31790010585369,1.28482726513177,1.56478268869608,1.30815093828268,0.878744730937887,0.972149495371417,0.839918529752175,1.43752564364972,13.0870432725034,6.5282592781021,7.73015738027667,0.514518872071894,0.286533439938757,0.515672092277442,0.404632921719196,1.05798195854407,1.26766280701236,2.71075625655306,0.889294796111139,2.6996991518442,0.988866362566974,2.1314403448383,0.898800331555214,4.2264013585371,0.103689612308478,0.675029691658453,0.630974884054146,1.71390590642282,1.10434270475807,0.489963196859816,0.958454710182364,0.919218786610021,0,0.510749352340751,0.614426133024974,0.923204014111357,0.457438218012048,0.52091337055676,2.23346399201105,0.56276261003168,0.763991238884051,1.17851434189467,0.996601765593721,0.931997229126503,1.51452386666368,0.831287161174641,5.2175607966302,0.860423876981386,2.03991400112325,0,0,0,1.12355536105401,0.852151612890289,1.03914401841148,1.41335829804136,0.845060518660083,0,0,0,1.29894624606728,0.253359865475099,1.01104889002957,1.1418387971906,3.88406825470758,0,1.38788261412909,0.913396434936424,0.691846491768175,1.05505848386836,0.470354828542819,0.251333182659351,1.23597483867187,0.144599356919912,0.884610551949874,0.970601099684455,1.54589062922275,0.969750506270444,3.72783522436244,0.878342391034642,0.209446706813455,0.255457055208591,4.07371423320129,6.59893004092748,4.57452817463033,0.599162557619291,0.457500602818626,0.251308704225729,3.30266208365325,1.79000820131231,1.24672826735736,0.324482526135515,0.712875546952214,0.870848794270651,1.51633655060205,0.210441855886474,0.650602214813519,1.14951052216736,1.44049703844279,0.60281927134286,0.408218994907967,0.768682321709099,0.562210347358373,0.517406741478031,2.37124792226126,1.13463648100692,0.879755620819744,0.657587197282725,0.834141747676794,0,1.02891068203972,1.59227413454795,2.80885274925294,5.1469581422943,3.6941254921427,0.828503090142008,0.938104239924385,1.44049649168812,0.710234206755631,0.590292695242212,0.617068451549513,0,0.268273401399619,0.817357396570186,0.16455984991348,0.32833492815819,0.486412857275134,0.438599962275997,1.3173006917463,0.805238512562231,0.841159794256509,0.514523061896422,1.98251269790279,0.264450566663544,1.06644125267617,1.62565670302307,0.515469845288373,0.605050573870028,0.22237804384487,1.33157938278791,0.949058123089023,0.823494773620054,0.754005626400808,0.994782360205754,0.779856348476481,0,1.08069024937347,0.398282546508734,0.758671603812327,0.685491075658373,0,1.01825663922657,0.581857461502877,0.420814919341911,0.505892296994058,0.442830443938806,0.470996183524124,0.493588655687202,0,0.83422552858047,0.786235980452812,1.12431056192427,0.405720242777006,0.482354319504834,1.52775511068852,0.287696137450811,0.324270453550071,0.823684239564244,0,0.372140947668503,1.24815069245824,0,0.717589654087649,0.482443521363367,1.10851914099963,0.37898282354097,0.814824882210129,0.848725428875941,0.469380496577004,1.17254380209271,0.952174563544055,1.17080188714679,0.630540576424764,0.221464689648775,0,0.81931657357869,0.518054945597687,1.73578870297814,3.01582567878545,1.08781136763742,0.491764273019036,0.275936746304732,0.642202359951168,1.17211686592203,4.59017847054691,0.252470927204373,1.57754109708128,2.34263246577983,0.646270193198397,1.67278158566786,1.33679204449436,0.283076530788832,0,0,0,0.963963949265421,0.425820255624806,1.42452482933804,0.977321756121456,0.989820737835213,0,0.242780636154981,0,0.188605079755898,0.590603785761546,0,0.258428293168221,0.363533729477506,1.06949213515416,0,1.05418608574999,1.03135543248187,1.36175842301515,0.900305470156551,0.776152102696527,0.428674070063185,0.532020700926821,0.178368817602071,0.164549020602121,1.2178597964584,1.87737366450968,0.42366414172764,1.10264199027481,0.49465875882444,0.645857706783622,0.542816324353403,0.358117032009409,1.31312719796049,0,0.370850604021019,2.56306321196779,0.619160603889667,0.740778109478847,0.941842285023455,1.50363650493128,2.51655990527175,7.81900777971734,8.39708713941948,5.11339903076368,0.954670618015114,1.73984796469624,1.42323626988794,0.540026704109006,0.418176592028937,0.436725127492355,0.539457385539283,0.330613822901344,0,0.518459893167171,3.10669656543463,40.5858915852617,1.04661582230785,1.48912641411388,0.388902376688095,0.904118764344118,2.02747350588934,1.29092962510329,0.651021924219751,1.04859344425711,3.14059357073808,22.7543704943714,6.63623353319174,1.41907650703115,2.56777392912068,3.11809975146708,3.93858730468459,4.96703386953162,4.08664528367894,3.98761723371358,4.84638959751109,3.58171991278499,3.7305688500631,3.70339946811059,3.46362629905186,3.85693777199178,0,1.99787358036658,3.3194126945506,1.51096154727671,0.386379188064381,0.93841237725591,0.915758121336325,1.2862102744744,0,2.82375921308533,0.460325236507177,2.86447756719698,1.71853182343688,2.74033007908257,2.2661816921691,2.70009000092722,1.35096360967266,3.17199686288943,3.10656187051092,1.03787347584177,0,0.853668028770671,0,2.09613162627982,0.367687016900028,0.44449345560323,0.618105171716683,0.962757628775446,0.758091635291392,0,0.377252682772152,0.280924522409647,0.128050304809739,0.689225627467359,0.476293691283074,0.115884325944855,0.192909220463705,1.23625770240992,0.588795680537589,0.342869252385415,0.532427418478012,0,0.145346416632329,0.658765662907314,0.423073039458382,0.365855945745545,0.789209134313529,0.679020569229309,1.12228454331548,0.711810108745045,0.591026894253381,0.409231043169689,0.77468420592983,0.578719832943424,0.499621155875892,0.935726433781634,0.644613162144895,0.382576664137687,0.661774257358546,0.695603506861264 | |phase1_expression=1.12104192973356,5.23463111459042,2.27499619694768,2.41971369045464,3.50627010962443,1.00727563147134,1.40167584357315,9.29687928779349,7.03943610758334,6.78787126333781,7.70480857014772,5.90313976565489,10.2720437958723,8.47977903464275,1.66554880907831,2.83465374345756,0.699561878128147,11.3566379528966,9.04955261797876,10.6097412949508,7.05859308253879,3.07801948722744,3.91799683708403,1.75991665072747,2.98232065387321,3.44539178469012,1.7230479846363,2.15471232685889,1.33016393619462,1.00812051903972,1.77384408524244,0.635030673459631,1.23012957516914,0,0.866554859253824,0.831173226792462,0.408338712524738,5.85944283031671,8.5946887897618,5.75876118371178,5.88231488031014,8.87959130445979,4.36959317728038,0.755380907853464,1.31790010585369,1.28482726513177,1.56478268869608,1.30815093828268,0.878744730937887,0.972149495371417,0.839918529752175,1.43752564364972,13.0870432725034,6.5282592781021,7.73015738027667,0.514518872071894,0.286533439938757,0.515672092277442,0.404632921719196,1.05798195854407,1.26766280701236,2.71075625655306,0.889294796111139,2.6996991518442,0.988866362566974,2.1314403448383,0.898800331555214,4.2264013585371,0.103689612308478,0.675029691658453,0.630974884054146,1.71390590642282,1.10434270475807,0.489963196859816,0.958454710182364,0.919218786610021,0,0.510749352340751,0.614426133024974,0.923204014111357,0.457438218012048,0.52091337055676,2.23346399201105,0.56276261003168,0.763991238884051,1.17851434189467,0.996601765593721,0.931997229126503,1.51452386666368,0.831287161174641,5.2175607966302,0.860423876981386,2.03991400112325,0,0,0,1.12355536105401,0.852151612890289,1.03914401841148,1.41335829804136,0.845060518660083,0,0,0,1.29894624606728,0.253359865475099,1.01104889002957,1.1418387971906,3.88406825470758,0,1.38788261412909,0.913396434936424,0.691846491768175,1.05505848386836,0.470354828542819,0.251333182659351,1.23597483867187,0.144599356919912,0.884610551949874,0.970601099684455,1.54589062922275,0.969750506270444,3.72783522436244,0.878342391034642,0.209446706813455,0.255457055208591,4.07371423320129,6.59893004092748,4.57452817463033,0.599162557619291,0.457500602818626,0.251308704225729,3.30266208365325,1.79000820131231,1.24672826735736,0.324482526135515,0.712875546952214,0.870848794270651,1.51633655060205,0.210441855886474,0.650602214813519,1.14951052216736,1.44049703844279,0.60281927134286,0.408218994907967,0.768682321709099,0.562210347358373,0.517406741478031,2.37124792226126,1.13463648100692,0.879755620819744,0.657587197282725,0.834141747676794,0,1.02891068203972,1.59227413454795,2.80885274925294,5.1469581422943,3.6941254921427,0.828503090142008,0.938104239924385,1.44049649168812,0.710234206755631,0.590292695242212,0.617068451549513,0,0.268273401399619,0.817357396570186,0.16455984991348,0.32833492815819,0.486412857275134,0.438599962275997,1.3173006917463,0.805238512562231,0.841159794256509,0.514523061896422,1.98251269790279,0.264450566663544,1.06644125267617,1.62565670302307,0.515469845288373,0.605050573870028,0.22237804384487,1.33157938278791,0.949058123089023,0.823494773620054,0.754005626400808,0.994782360205754,0.779856348476481,0,1.08069024937347,0.398282546508734,0.758671603812327,0.685491075658373,0,1.01825663922657,0.581857461502877,0.420814919341911,0.505892296994058,0.442830443938806,0.470996183524124,0.493588655687202,0,0.83422552858047,0.786235980452812,1.12431056192427,0.405720242777006,0.482354319504834,1.52775511068852,0.287696137450811,0.324270453550071,0.823684239564244,0,0.372140947668503,1.24815069245824,0,0.717589654087649,0.482443521363367,1.10851914099963,0.37898282354097,0.814824882210129,0.848725428875941,0.469380496577004,1.17254380209271,0.952174563544055,1.17080188714679,0.630540576424764,0.221464689648775,0,0.81931657357869,0.518054945597687,1.73578870297814,3.01582567878545,1.08781136763742,0.491764273019036,0.275936746304732,0.642202359951168,1.17211686592203,4.59017847054691,0.252470927204373,1.57754109708128,2.34263246577983,0.646270193198397,1.67278158566786,1.33679204449436,0.283076530788832,0,0,0,0.963963949265421,0.425820255624806,1.42452482933804,0.977321756121456,0.989820737835213,0,0.242780636154981,0,0.188605079755898,0.590603785761546,0,0.258428293168221,0.363533729477506,1.06949213515416,0,1.05418608574999,1.03135543248187,1.36175842301515,0.900305470156551,0.776152102696527,0.428674070063185,0.532020700926821,0.178368817602071,0.164549020602121,1.2178597964584,1.87737366450968,0.42366414172764,1.10264199027481,0.49465875882444,0.645857706783622,0.542816324353403,0.358117032009409,1.31312719796049,0,0.370850604021019,2.56306321196779,0.619160603889667,0.740778109478847,0.941842285023455,1.50363650493128,2.51655990527175,7.81900777971734,8.39708713941948,5.11339903076368,0.954670618015114,1.73984796469624,1.42323626988794,0.540026704109006,0.418176592028937,0.436725127492355,0.539457385539283,0.330613822901344,0,0.518459893167171,3.10669656543463,40.5858915852617,1.04661582230785,1.48912641411388,0.388902376688095,0.904118764344118,2.02747350588934,1.29092962510329,0.651021924219751,1.04859344425711,3.14059357073808,22.7543704943714,6.63623353319174,1.41907650703115,2.56777392912068,3.11809975146708,3.93858730468459,4.96703386953162,4.08664528367894,3.98761723371358,4.84638959751109,3.58171991278499,3.7305688500631,3.70339946811059,3.46362629905186,3.85693777199178,0,1.99787358036658,3.3194126945506,1.51096154727671,0.386379188064381,0.93841237725591,0.915758121336325,1.2862102744744,0,2.82375921308533,0.460325236507177,2.86447756719698,1.71853182343688,2.74033007908257,2.2661816921691,2.70009000092722,1.35096360967266,3.17199686288943,3.10656187051092,1.03787347584177,0,0.853668028770671,0,2.09613162627982,0.367687016900028,0.44449345560323,0.618105171716683,0.962757628775446,0.758091635291392,0,0.377252682772152,0.280924522409647,0.128050304809739,0.689225627467359,0.476293691283074,0.115884325944855,0.192909220463705,1.23625770240992,0.588795680537589,0.342869252385415,0.532427418478012,0,0.145346416632329,0.658765662907314,0.423073039458382,0.365855945745545,0.789209134313529,0.679020569229309,1.12228454331548,0.711810108745045,0.591026894253381,0.409231043169689,0.77468420592983,0.578719832943424,0.499621155875892,0.935726433781634,0.644613162144895,0.382576664137687,0.661774257358546,0.695603506861264 | ||
|short_description=p3@Znrd1 | |short_description=p3@Znrd1 | ||
}} | }} |
Latest revision as of 11:21, 26 September 2015
Short description: | p3@Znrd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Znrd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1058 |
Association with transcript: | 4bp_to_ENSMUST00000174466_5end |
EntrezGene: | Znrd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.63e-13 | 32 |
hematopoietic oligopotent progenitor cell | 2.63e-13 | 32 |
hematopoietic stem cell | 2.63e-13 | 32 |
hematopoietic multipotent progenitor cell | 2.63e-13 | 32 |
connective tissue cell | 6.04e-11 | 46 |
mesenchymal cell | 6.04e-11 | 46 |
lymphoid lineage restricted progenitor cell | 5.27e-10 | 12 |
hematopoietic lineage restricted progenitor cell | 6.03e-10 | 25 |
motile cell | 8.11e-10 | 54 |
lymphocyte | 1.07e-09 | 13 |
common lymphoid progenitor | 1.07e-09 | 13 |
leukocyte | 1.88e-09 | 17 |
nongranular leukocyte | 1.88e-09 | 17 |
T cell | 3.65e-09 | 11 |
pro-T cell | 3.65e-09 | 11 |
mature alpha-beta T cell | 3.23e-08 | 9 |
alpha-beta T cell | 3.23e-08 | 9 |
immature T cell | 3.23e-08 | 9 |
mature T cell | 3.23e-08 | 9 |
immature alpha-beta T cell | 3.23e-08 | 9 |
CD4-positive, alpha-beta T cell | 1.82e-07 | 8 |
stem cell | 7.04e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.83e-14 | 48 |
immune system | 1.83e-14 | 48 |
hematopoietic system | 3.84e-13 | 45 |
blood island | 3.84e-13 | 45 |
connective tissue | 6.04e-11 | 46 |
gland of gut | 1.18e-10 | 24 |
thymus | 3.46e-10 | 23 |
neck | 3.46e-10 | 23 |
respiratory system epithelium | 3.46e-10 | 23 |
hemolymphoid system gland | 3.46e-10 | 23 |
pharyngeal epithelium | 3.46e-10 | 23 |
thymic region | 3.46e-10 | 23 |
pharyngeal gland | 3.46e-10 | 23 |
entire pharyngeal arch endoderm | 3.46e-10 | 23 |
thymus primordium | 3.46e-10 | 23 |
early pharyngeal endoderm | 3.46e-10 | 23 |
pharynx | 2.13e-09 | 24 |
upper respiratory tract | 2.13e-09 | 24 |
chordate pharynx | 2.13e-09 | 24 |
pharyngeal arch system | 2.13e-09 | 24 |
pharyngeal region of foregut | 2.13e-09 | 24 |
hemopoietic organ | 5.64e-09 | 29 |
immune organ | 5.64e-09 | 29 |
mixed endoderm/mesoderm-derived structure | 8.66e-09 | 35 |
segment of respiratory tract | 1.10e-08 | 27 |