FFCP PHASE1:Mm9::chr7:27963833..27963848,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:27963833..27963848,- to FFCP PHASE1:Mm9::chr7:27963833..27963848,-: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19342 | |EntrezGene=19342 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000134462,ENSMUST00000141906_5end | |||
|cluster_id=chr7:27963833..27963848,- | |||
|description=CAGE_peak_2_at_Rab4b_5end | |||
|id=chr7:27963833..27963848,- | |||
|ontology_enrichment_celltype=CL:0000117!5.02e-08!23;CL:0000337!5.02e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.67e-08,23;CL:0000337,1.67e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.59e-13!52;UBERON:0005068!2.59e-13!52;UBERON:0006241!2.59e-13!52;UBERON:0007135!2.59e-13!52;UBERON:0007811!2.91e-13!86;UBERON:0001017!5.13e-13!73;UBERON:0005743!5.13e-13!73;UBERON:0000073!4.29e-12!75;UBERON:0001016!4.29e-12!75;UBERON:0000955!1.11e-11!50;UBERON:0006238!1.11e-11!50;UBERON:0002616!2.51e-11!49;UBERON:0000153!2.78e-11!94;UBERON:0000033!1.85e-09!63;UBERON:0002020!1.86e-09!34;UBERON:0002346!7.81e-09!71;UBERON:0003075!7.81e-09!71;UBERON:0007284!7.81e-09!71;UBERON:0003080!1.14e-08!40;UBERON:0002780!3.22e-08!39;UBERON:0001890!3.22e-08!39;UBERON:0006240!3.22e-08!39;UBERON:0002791!3.24e-07!29;UBERON:0003528!3.24e-07!29;UBERON:0001893!3.24e-07!29;UBERON:0004121!3.74e-07!102;UBERON:0000924!3.74e-07!102;UBERON:0006601!3.74e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.08e-15,54;UBERON:0001049,1.41e-14,52;UBERON:0005068,1.41e-14,52;UBERON:0006241,1.41e-14,52;UBERON:0007135,1.41e-14,52;UBERON:0001017,3.67e-14,73;UBERON:0001016,3.88e-13,75;UBERON:0000955,1.05e-11,47;UBERON:0006238,1.05e-11,47;UBERON:0002616,2.58e-11,46;UBERON:0002346,3.01e-11,64;UBERON:0003075,3.01e-11,64;UBERON:0007284,3.01e-11,64;UBERON:0002020,9.73e-11,34;UBERON:0003080,2.20e-09,40;UBERON:0004121,5.56e-09,95;UBERON:0000924,5.56e-09,95;UBERON:0006601,5.56e-09,95;UBERON:0002780,7.07e-09,39;UBERON:0001890,7.07e-09,39;UBERON:0006240,7.07e-09,39;UBERON:0010371,8.57e-09,73;UBERON:0003528,3.53e-08,29;UBERON:0002791,3.53e-08,29;UBERON:0001893,3.53e-08,29;UBERON:0003056,5.79e-07,49;UBERON:0010314,9.43e-07,92 | |||
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| ||
|short_description=p2@Rab4b | |||
}} | }} |
Latest revision as of 11:28, 26 September 2015
Short description: | p2@Rab4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rab4b_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000134462, ENSMUST00000141906_5end |
EntrezGene: | Rab4b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.67e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.67e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 5.08e-15 | 54 |
neural tube | 1.41e-14 | 52 |
neural rod | 1.41e-14 | 52 |
future spinal cord | 1.41e-14 | 52 |
neural keel | 1.41e-14 | 52 |
central nervous system | 3.67e-14 | 73 |
nervous system | 3.88e-13 | 75 |
brain | 1.05e-11 | 47 |
future brain | 1.05e-11 | 47 |
regional part of brain | 2.58e-11 | 46 |
neurectoderm | 3.01e-11 | 64 |
neural plate | 3.01e-11 | 64 |
presumptive neural plate | 3.01e-11 | 64 |
gray matter | 9.73e-11 | 34 |
anterior neural tube | 2.20e-09 | 40 |
ectoderm-derived structure | 5.56e-09 | 95 |
ectoderm | 5.56e-09 | 95 |
presumptive ectoderm | 5.56e-09 | 95 |
regional part of forebrain | 7.07e-09 | 39 |
forebrain | 7.07e-09 | 39 |
future forebrain | 7.07e-09 | 39 |
ecto-epithelium | 8.57e-09 | 73 |
brain grey matter | 3.53e-08 | 29 |
regional part of telencephalon | 3.53e-08 | 29 |
telencephalon | 3.53e-08 | 29 |
pre-chordal neural plate | 5.79e-07 | 49 |
structure with developmental contribution from neural crest | 9.43e-07 | 92 |