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FFCP PHASE1:Mm9::chr9:21856465..21856470,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:21856465..21856470,-
|DHSsupport=NA
|short_description=p1@Elavl3
|DPIdataset=NA
|description=CAGE_peak_1_at_Elavl3_5end
|association_with_transcript=0bp_to_ENSMUST00000003501,NM_010487,uc009onl.2,uc009ono.2_5end
|EntrezGene=15571
|EntrezGene=15571
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q60900
|UniProt=Q60900
|association_with_transcript=0bp_to_ENSMUST00000003501,NM_010487,uc009onl.2,uc009ono.2_5end
|cluster_id=chr9:21856465..21856470,-
|description=CAGE_peak_1_at_Elavl3_5end
|id=chr9:21856465..21856470,-
|ontology_enrichment_celltype=CL:0000540!1.74e-18!33;CL:0000047!1.74e-18!33;CL:0000031!1.74e-18!33;CL:0000404!1.74e-18!33;CL:0000117!1.14e-16!23;CL:0000337!1.14e-16!23;CL:0000221!3.12e-16!44;CL:0000133!3.12e-16!44;CL:0002319!4.21e-16!43;CL:0000393!7.95e-13!39;CL:0000211!7.95e-13!39;CL:0000055!4.19e-11!50
|ontology_enrichment_celltype_v019_2=CL:0000540,5.61e-22,33;CL:0000047,5.61e-22,33;CL:0000031,5.61e-22,33;CL:0000404,5.61e-22,33;CL:0000117,8.75e-20,23;CL:0000337,8.75e-20,23;CL:0000221,3.05e-17,44;CL:0000133,3.05e-17,44;CL:0002319,4.47e-17,43;CL:0000393,2.18e-16,39;CL:0000211,2.18e-16,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.44e-30!75;UBERON:0001016!3.44e-30!75;UBERON:0001017!3.94e-30!73;UBERON:0005743!3.94e-30!73;UBERON:0004121!3.06e-28!102;UBERON:0000924!3.06e-28!102;UBERON:0006601!3.06e-28!102;UBERON:0002346!8.41e-28!71;UBERON:0003075!8.41e-28!71;UBERON:0007284!8.41e-28!71;UBERON:0000033!2.19e-23!63;UBERON:0001049!6.51e-23!52;UBERON:0005068!6.51e-23!52;UBERON:0006241!6.51e-23!52;UBERON:0007135!6.51e-23!52;UBERON:0000955!3.63e-21!50;UBERON:0006238!3.63e-21!50;UBERON:0002616!1.47e-20!49;UBERON:0003056!1.54e-20!49;UBERON:0002020!5.44e-20!34;UBERON:0003080!5.60e-17!40;UBERON:0002791!1.49e-16!29;UBERON:0003528!1.49e-16!29;UBERON:0001893!1.49e-16!29;UBERON:0002780!2.05e-16!39;UBERON:0001890!2.05e-16!39;UBERON:0006240!2.05e-16!39;UBERON:0007811!2.57e-15!86;UBERON:0000153!1.48e-11!94;UBERON:0000956!2.79e-11!21;UBERON:0001869!2.79e-11!21;UBERON:0000203!2.79e-11!21;UBERON:0002619!1.05e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.71e-35,73;UBERON:0001016,2.61e-34,75;UBERON:0002346,1.41e-32,64;UBERON:0003075,1.41e-32,64;UBERON:0007284,1.41e-32,64;UBERON:0004121,2.71e-32,95;UBERON:0000924,2.71e-32,95;UBERON:0006601,2.71e-32,95;UBERON:0000073,3.74e-28,54;UBERON:0010371,2.71e-27,73;UBERON:0001049,9.78e-27,52;UBERON:0005068,9.78e-27,52;UBERON:0006241,9.78e-27,52;UBERON:0007135,9.78e-27,52;UBERON:0003056,1.18e-23,49;UBERON:0000955,1.60e-22,47;UBERON:0006238,1.60e-22,47;UBERON:0002020,2.48e-22,34;UBERON:0002616,8.32e-22,46;UBERON:0010314,2.28e-20,92;UBERON:0003080,2.29e-19,40;UBERON:0002780,1.08e-18,39;UBERON:0001890,1.08e-18,39;UBERON:0006240,1.08e-18,39;UBERON:0003528,3.15e-18,29;UBERON:0002791,3.15e-18,29;UBERON:0001893,3.15e-18,29;UBERON:0000956,5.77e-12,21;UBERON:0001869,5.77e-12,21;UBERON:0000203,5.77e-12,21;UBERON:0002619,6.18e-09,17;UBERON:0003076,7.01e-08,12;UBERON:0003057,7.01e-08,12;UBERON:0002420,1.24e-07,8;UBERON:0007245,1.24e-07,8;UBERON:0010009,1.24e-07,8;UBERON:0010011,1.24e-07,8;UBERON:0000454,1.24e-07,8;UBERON:0002021,8.01e-07,10;UBERON:0000411,8.01e-07,10;UBERON:0001950,8.01e-07,10
|phase1_expression=2.08193501236232,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0.70219357896598,0,0.239316476986009,0,0,0,0,0,0,0,0,3.74190476664707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,3.2703773457067,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0.336093799142464,0,0,0,80.9265843438391,77.2326829737168,94.4408791224207,0,0,0,0,0,3.89480143673926,4.61061966385865,68.0203856743613,56.7024940993101,64.3594381735229,75.6975108670079,66.4814308264357,70.7996819462434,79.7434318871727,107.548598033372,23.1243350098716,38.8169507778971,31.4893393175299,79.3955452135767,77.947472349253,65.114171319595,47.7402928292361,32.6402313818374,39.7275444219706,37.4178303551558,44.7047077709183,60.9526187848733,0.681535739998656,1.73814588245607,0,0,0,0,0,0,1.26399978118577,0,0,0,2.81686839553361,0,0,0,0,0,0,0.22836775943812,0,0.742210695324124,5.03107447621794,2.43572382649713,2.07553947530453,5.42601505989441,5.52666923537813,0,0,0,0,0,0,0,0,49.1871738979399,71.2118803165747,0.510914110417183,0,0,0,31.0066623567983,24.7050325522058,116.984201817077,42.9346070874923,39.3801804288709,38.0252121543995,50.2947915510049,0.203678727700633,0,0,2.73574412652416,5.85541993332167,10.8053989083732,16.5657159420921,18.0845781402858,22.5881177182408,22.163673609279,26.1427811521643,9.57202471734358,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.469052119962192,0.36012412292203,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,35.7492912559016,104.242372340215,0,0,2.13288250535234,1.39342003116263,3.22168653305233,1.61346819698674,2.00140239460383,2.28270751335071,0,1.97638745668813,0.754005626400808,0.596869416123452,0.38992817423824,1.79763881730844,0.432276099749388,0.398282546508734,0.569003702859245,0.913988100877831,0,0,0,0.210407459670956,0,0.295220295959204,0.156998727841375,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0.167506257441816,0,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,27.1330497079368,53.3313173994524,0,0,6.31016438832513,6.24701990874622,12.0637102730367,2.15071918157297,6.46116154838943,5.66153061577665,9.71545684019746,11.9824901743638,11.0680577825027,34.3813808571334,0.141940085208269,0,0,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0,0.356497378384721,0.316036757935816,0,0,0,6.30213829109586,3.75140182969988,1.92903331528433,0,2.31879462882692,4.27827453565514,3.34911444026059,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0.874442509889552,37.826761610144,0,0.206386867963223,0,0,0,0,0,0,0,0,2.84702394223022,1.01659733563424,1.62008011232702,1.04544148007234,0.87345025498471,0.134864346384821,1.1571483801547,0,0.518459893167171,0,1.69107881605257,0,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0.13020438484395,1.57289016638566,2.17425708743405,2.01621004380506,0,0,0.308132871494482,0.25984164595559,0.537080087002444,0,0.360586348559907,0.147689527174577,0.302899349844443,0.15241361331,0.201652370273681,0,0.384847366561318,0.233753804363138,0,0.221985953374065,0,0,0.579568782096571,0,0,0,0,23.1548255472997,27.1591889539234,24.0616115644547,15.9823459579629,15.7568979547248,14.3524840504043,22.9507650078814,14.8605997063993,25.8291173120997,18.6393712230655,18.9930846079043,36.3112634794938,24.5856392285953,17.2605769118489,14.4633082213308,13.9721066422011,5.11167473943715,6.38708677440572,7.70206103020357,4.29585259998456,8.11133759648767,4.14977951049368,6.83583004530142,6.21043978327232,7.46661096422972,6.66811167796303,13.4425818096032,12.5390993301408,12.7746629249025,13.9838974127677,9.94320831917705,7.0990322463735,10.2527561677348,7.99405291477807,12.4224382148236,9.64606529965112,11.5244622909847,8.15516105457313,10.4569167661314,6.17256498823512,14.5921072292734,11.4265199555654,10.6400071224119,10.3807683594597,13.5034627686799,43.7168511391405,10.7608539884888,11.8179079726564,3.06061331310149,2.20591419119516,1.15933917810211
|phase1_expression=2.08193501236232,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0.70219357896598,0,0.239316476986009,0,0,0,0,0,0,0,0,3.74190476664707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,3.2703773457067,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0.336093799142464,0,0,0,80.9265843438391,77.2326829737168,94.4408791224207,0,0,0,0,0,3.89480143673926,4.61061966385865,68.0203856743613,56.7024940993101,64.3594381735229,75.6975108670079,66.4814308264357,70.7996819462434,79.7434318871727,107.548598033372,23.1243350098716,38.8169507778971,31.4893393175299,79.3955452135767,77.947472349253,65.114171319595,47.7402928292361,32.6402313818374,39.7275444219706,37.4178303551558,44.7047077709183,60.9526187848733,0.681535739998656,1.73814588245607,0,0,0,0,0,0,1.26399978118577,0,0,0,2.81686839553361,0,0,0,0,0,0,0.22836775943812,0,0.742210695324124,5.03107447621794,2.43572382649713,2.07553947530453,5.42601505989441,5.52666923537813,0,0,0,0,0,0,0,0,49.1871738979399,71.2118803165747,0.510914110417183,0,0,0,31.0066623567983,24.7050325522058,116.984201817077,42.9346070874923,39.3801804288709,38.0252121543995,50.2947915510049,0.203678727700633,0,0,2.73574412652416,5.85541993332167,10.8053989083732,16.5657159420921,18.0845781402858,22.5881177182408,22.163673609279,26.1427811521643,9.57202471734358,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.469052119962192,0.36012412292203,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,35.7492912559016,104.242372340215,0,0,2.13288250535234,1.39342003116263,3.22168653305233,1.61346819698674,2.00140239460383,2.28270751335071,0,1.97638745668813,0.754005626400808,0.596869416123452,0.38992817423824,1.79763881730844,0.432276099749388,0.398282546508734,0.569003702859245,0.913988100877831,0,0,0,0.210407459670956,0,0.295220295959204,0.156998727841375,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0.167506257441816,0,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,27.1330497079368,53.3313173994524,0,0,6.31016438832513,6.24701990874622,12.0637102730367,2.15071918157297,6.46116154838943,5.66153061577665,9.71545684019746,11.9824901743638,11.0680577825027,34.3813808571334,0.141940085208269,0,0,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0,0.356497378384721,0.316036757935816,0,0,0,6.30213829109586,3.75140182969988,1.92903331528433,0,2.31879462882692,4.27827453565514,3.34911444026059,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0.874442509889552,37.826761610144,0,0.206386867963223,0,0,0,0,0,0,0,0,2.84702394223022,1.01659733563424,1.62008011232702,1.04544148007234,0.87345025498471,0.134864346384821,1.1571483801547,0,0.518459893167171,0,1.69107881605257,0,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0.13020438484395,1.57289016638566,2.17425708743405,2.01621004380506,0,0,0.308132871494482,0.25984164595559,0.537080087002444,0,0.360586348559907,0.147689527174577,0.302899349844443,0.15241361331,0.201652370273681,0,0.384847366561318,0.233753804363138,0,0.221985953374065,0,0,0.579568782096571,0,0,0,0,23.1548255472997,27.1591889539234,24.0616115644547,15.9823459579629,15.7568979547248,14.3524840504043,22.9507650078814,14.8605997063993,25.8291173120997,18.6393712230655,18.9930846079043,36.3112634794938,24.5856392285953,17.2605769118489,14.4633082213308,13.9721066422011,5.11167473943715,6.38708677440572,7.70206103020357,4.29585259998456,8.11133759648767,4.14977951049368,6.83583004530142,6.21043978327232,7.46661096422972,6.66811167796303,13.4425818096032,12.5390993301408,12.7746629249025,13.9838974127677,9.94320831917705,7.0990322463735,10.2527561677348,7.99405291477807,12.4224382148236,9.64606529965112,11.5244622909847,8.15516105457313,10.4569167661314,6.17256498823512,14.5921072292734,11.4265199555654,10.6400071224119,10.3807683594597,13.5034627686799,43.7168511391405,10.7608539884888,11.8179079726564,3.06061331310149,2.20591419119516,1.15933917810211
|short_description=p1@Elavl3
}}
}}

Latest revision as of 11:46, 26 September 2015

Short description:p1@Elavl3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Elavl3_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 0bp_to_ENSMUST00000003501, NM_010487, uc009onl.2, uc009ono.2_5end
EntrezGene:Elavl3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Elavl3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C380.93
Mouse Granule cells, donor2.CNhs12357.11731-123E377.23
Mouse Granule cells, donor3.CNhs12108.11636-122C794.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D568.02
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F556.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D964.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F175.70
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D566.48
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D270.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F279.74
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6107.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D323.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F338.82
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D731.49
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D479.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F477.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D865.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E447.74
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E532.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I639.73
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D637.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F644.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E160.95
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F91.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C55.03
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F55.43
adrenal gland, neonate N00.CNhs11191.1311-23C15.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B249.19
cerebellum, neonate N30.CNhs11135.1395-42I271.21
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A431.01
corpus striatum, adult.CNhs10487.19-21D824.71
corpus striatum, neonate N00.CNhs11226.630-43F1116.98
cortex, adult.CNhs10473.12-14D542.93
cortex, neonate N30.CNhs11107.1392-42F239.38
diencephalon, adult.CNhs10482.20-12F238.03
diencephalon, neonate N30.CNhs11201.1388-42B250.29
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C65.86
eyeball, embryo E14.CNhs10521.399-16E210.81
eyeball, embryo E15.CNhs10593.426-16C916.57
eyeball, embryo E17.CNhs11023.1261-18D418.08
eyeball, neonate N00.CNhs11207.633-15C622.59
eyeball, neonate N01.CNhs11140.1532-43E722.16
eyeball, neonate N02.CNhs11205.1551-44G826.14
eyeball, neonate N16.CNhs11188.777-19A29.57
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E835.75
hippocampus, neonate N00.CNhs11228.627-43G1104.24
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D83.22
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C227.13
medulla oblongata, neonate N30.CNhs11200.1396-42A353.33
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.31
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.06
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.72
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.98
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.07
olfactory brain, adult.CNhs10489.18-22I934.38
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E66.30
pituitary gland, embryo E13.CNhs11009.370-44C73.75
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C937.83
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.85
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D91.57
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.15
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A227.16
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A324.06
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A622.95
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.86
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A825.83
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.64
whole body, embryo E11.CNhs11014.324-5I818.99
whole body, embryo E12.CNhs10587.857-27C936.31
whole body, embryo E13.CNhs10512.372-23H224.59
whole body, embryo E14.5.CNhs10578.420-27D217.26
whole body, embryo E14.CNhs10519.395-14B114.46
whole body, embryo E16.CNhs10514.453-14F213.97
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.44
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G512.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.98
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.99
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.42
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.52
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.46
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.38
whole body, embryo E17.5.CNhs10513.490-9F913.50
whole body, embryo E17.CNhs10517.475-3I543.72
whole body, embryo E18.CNhs10516.493-3B310.76
whole body, neonate N00.CNhs10525.657-19C211.82
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron5.61e-2233
neuronal stem cell5.61e-2233
neuroblast5.61e-2233
electrically signaling cell5.61e-2233
CNS neuron (sensu Vertebrata)8.75e-2023
neuroblast (sensu Vertebrata)8.75e-2023
ectodermal cell3.05e-1744
neurectodermal cell3.05e-1744
neural cell4.47e-1743
electrically responsive cell2.18e-1639
electrically active cell2.18e-1639

Uber anatomy
Ontology termp-valuen
central nervous system4.71e-3573
nervous system2.61e-3475
neurectoderm1.41e-3264
neural plate1.41e-3264
presumptive neural plate1.41e-3264
ectoderm-derived structure2.71e-3295
ectoderm2.71e-3295
presumptive ectoderm2.71e-3295
regional part of nervous system3.74e-2854
ecto-epithelium2.71e-2773
neural tube9.78e-2752
neural rod9.78e-2752
future spinal cord9.78e-2752
neural keel9.78e-2752
pre-chordal neural plate1.18e-2349
brain1.60e-2247
future brain1.60e-2247
gray matter2.48e-2234
regional part of brain8.32e-2246
structure with developmental contribution from neural crest2.28e-2092
anterior neural tube2.29e-1940
regional part of forebrain1.08e-1839
forebrain1.08e-1839
future forebrain1.08e-1839
brain grey matter3.15e-1829
regional part of telencephalon3.15e-1829
telencephalon3.15e-1829
cerebral cortex5.77e-1221
cerebral hemisphere5.77e-1221
pallium5.77e-1221
regional part of cerebral cortex6.18e-0917
posterior neural tube7.01e-0812
chordal neural plate7.01e-0812
basal ganglion1.24e-078
nuclear complex of neuraxis1.24e-078
aggregate regional part of brain1.24e-078
collection of basal ganglia1.24e-078
cerebral subcortex1.24e-078
occipital lobe8.01e-0710
visual cortex8.01e-0710
neocortex8.01e-0710
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