FFCP PHASE1:Mm9::chr6:117791192..117791269,+: Difference between revisions
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{{FFCP|EntrezGene=232337|HGNC=|UniProt=D3Z3T2,Q80V23,D3Z0E5|association_with_transcript=0bp_to_ENSMUST00000112859,ENSMUST00000112861,ENSMUST00000127593,ENSMUST00000137224,ENSMUST00000164472,NM_177684,uc009dky.1,uc009dkz.1_5end|description=CAGE_peak_1_at_Zfp637_5end|id=chr6:117791192..117791269,+|ontology_enrichment_celltype=CL:0000393!1.65e-09!39;CL:0000211!1.65e-09!39;CL:0000117!9.45e-09!23;CL:0000337!9.45e-09!23;CL:0000540!1.08e-08!33;CL:0000047!1.08e-08!33;CL:0000031!1.08e-08!33;CL:0000404!1.08e-08!33|ontology_enrichment_celltype_v019_2=CL:0000393,1.65e-09,39;CL:0000211,1.65e-09,39;CL:0000117,9.45e-09,23;CL:0000337,9.45e-09,23;CL:0000540,1.08e-08,33;CL:0000047,1.08e-08,33;CL:0000031,1.08e-08,33;CL:0000404,1.08e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.89e-16!52;UBERON:0005068!5.89e-16!52;UBERON:0006241!5.89e-16!52;UBERON:0007135!5.89e-16!52;UBERON:0001017!3.13e-15!73;UBERON:0005743!3.13e-15!73;UBERON:0000033!3.25e-15!63;UBERON:0000073!4.38e-15!75;UBERON:0001016!4.38e-15!75;UBERON:0003056!2.20e-14!49;UBERON:0003080!2.58e-14!40;UBERON:0002780!6.53e-14!39;UBERON:0001890!6.53e-14!39;UBERON:0006240!6.53e-14!39;UBERON:0000955!7.37e-14!50;UBERON:0006238!7.37e-14!50;UBERON:0002346!1.71e-13!71;UBERON:0003075!1.71e-13!71;UBERON:0007284!1.71e-13!71;UBERON:0002616!1.78e-13!49;UBERON:0004111!8.42e-13!122;UBERON:0000025!1.62e-12!114;UBERON:0004121!5.47e-12!102;UBERON:0000924!5.47e-12!102;UBERON:0006601!5.47e-12!102;UBERON:0002020!7.40e-12!34;UBERON:0002791!7.90e-11!29;UBERON:0003528!7.90e-11!29;UBERON:0001893!7.90e-11!29;UBERON:0000153!4.45e-10!94;UBERON:0007811!5.26e-08!86;UBERON:0000956!7.25e-08!21;UBERON:0001869!7.25e-08!21;UBERON:0000203!7.25e-08!21;UBERON:0000468!8.79e-08!333;UBERON:0000479!2.81e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.92e-16,64;UBERON:0003075,1.92e-16,64;UBERON:0007284,1.92e-16,64;UBERON:0001049,5.89e-16,52;UBERON:0005068,5.89e-16,52;UBERON:0006241,5.89e-16,52;UBERON:0007135,5.89e-16,52;UBERON:0001017,3.13e-15,73;UBERON:0001016,4.38e-15,75;UBERON:0010371,7.16e-15,73;UBERON:0000955,9.91e-15,47;UBERON:0006238,9.91e-15,47;UBERON:0000073,1.16e-14,54;UBERON:0003056,2.20e-14,49;UBERON:0002616,2.42e-14,46;UBERON:0003080,2.58e-14,40;UBERON:0004121,5.03e-14,95;UBERON:0000924,5.03e-14,95;UBERON:0006601,5.03e-14,95;UBERON:0002780,6.53e-14,39;UBERON:0001890,6.53e-14,39;UBERON:0006240,6.53e-14,39;UBERON:0010314,1.12e-13,92;UBERON:0004111,8.42e-13,122;UBERON:0000025,1.62e-12,114;UBERON:0002020,7.40e-12,34;UBERON:0003528,7.90e-11,29;UBERON:0002791,7.90e-11,29;UBERON:0001893,7.90e-11,29;UBERON:0000956,7.25e-08,21;UBERON:0001869,7.25e-08,21;UBERON:0000203,7.25e-08,21;UBERON:0000479,2.81e-07,349|phase1_expression=20.979498970728,4.53668029931169,5.0049916332849,8.46899791659124,7.01254021924886,8.56184286750638,7.70921713965235,6.58528949552039,2.53419699873,3.7450324211519,4.96532107853964,5.98291192465023,9.24483941628511,9.00430144915673,10.3264026162855,10.1237633694913,10.4934281719222,8.04428521663506,8.36398044995006,10.1853516431527,10.4603246885816,9.23405846168233,10.4479915655574,9.43955294481099,9.1763712426868,9.76194338995534,8.61523992318149,6.67960821326256,13.6816862008589,10.3332353201572,7.31710685162506,8.25539875497521,4.92051830067656,0,14.731432607315,14.9611180822643,11.8418226632174,6.27797446105362,7.0320181007142,2.61761871986899,5.88231488031014,2.04913645487534,4.36959317728038,18.0032449705076,19.0588630692687,18.9053154726532,7.82391344348039,9.3750817243592,11.643367684927,11.4713640453827,9.37909024889929,7.18762821824858,4.02678254538567,2.90144856804538,7.05796978199174,13.3774906738692,14.8997388768154,17.0171790451556,25.4918740683093,22.2176211294254,20.9164363157039,12.5372476865579,13.3394219416671,12.1486461832989,11.8663963508037,7.8152812644071,8.68840320503374,15.3687322128622,32.9732967140959,37.9366686712051,42.4856421929792,17.1390590642282,18.5529574399355,31.6026261974581,24.344749638632,32.1726575313507,11.0115880999389,13.9179198512855,15.2070467923681,20.0467157349895,20.767695097747,23.4411016750542,24.5681039121215,22.5105044012672,17.4190002465564,13.8475435172624,18.0812034614861,22.7407323906867,16.2054053733014,12.5448789777264,15.6526823898906,16.3480536626463,5.439770669662,12.4131734076698,23.3919510281161,15.2329141613094,15.7297750547562,32.552191612409,37.9287566720188,34.9806178765237,21.4081998060554,29.5150898052931,20.3844191765317,7.11066703153331,11.6905162146056,15.2015919285059,10.6160133453104,9.24889425724386,5.95557132388495,12.3206975423805,11.7970022200972,11.8741536541735,12.2226213545711,9.79697163592047,10.2302175208063,13.6976584549346,10.6293836125781,16.0505286181102,9.73071607144862,12.2942805960031,11.7046004784009,9.21262980956922,16.775258509631,19.3235326027621,24.5052646971742,9.96282515313506,5.75112597628417,7.19883277192089,8.76784566804146,19.9221550408414,14.640019290196,28.0209205211688,21.0327427432655,20.9686675010871,16.415255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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=232337 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=D3Z3T2,Q80V23,D3Z0E5 | |||
|association_with_transcript=0bp_to_ENSMUST00000112859,ENSMUST00000112861,ENSMUST00000127593,ENSMUST00000137224,ENSMUST00000164472,NM_177684,uc009dky.1,uc009dkz.1_5end | |||
|cluster_id=chr6:117791192..117791269,+ | |||
|description=CAGE_peak_1_at_Zfp637_5end | |||
|id=chr6:117791192..117791269,+ | |||
|ontology_enrichment_celltype=CL:0000393!1.65e-09!39;CL:0000211!1.65e-09!39;CL:0000117!9.45e-09!23;CL:0000337!9.45e-09!23;CL:0000540!1.08e-08!33;CL:0000047!1.08e-08!33;CL:0000031!1.08e-08!33;CL:0000404!1.08e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.65e-09,39;CL:0000211,1.65e-09,39;CL:0000117,9.45e-09,23;CL:0000337,9.45e-09,23;CL:0000540,1.08e-08,33;CL:0000047,1.08e-08,33;CL:0000031,1.08e-08,33;CL:0000404,1.08e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.89e-16!52;UBERON:0005068!5.89e-16!52;UBERON:0006241!5.89e-16!52;UBERON:0007135!5.89e-16!52;UBERON:0001017!3.13e-15!73;UBERON:0005743!3.13e-15!73;UBERON:0000033!3.25e-15!63;UBERON:0000073!4.38e-15!75;UBERON:0001016!4.38e-15!75;UBERON:0003056!2.20e-14!49;UBERON:0003080!2.58e-14!40;UBERON:0002780!6.53e-14!39;UBERON:0001890!6.53e-14!39;UBERON:0006240!6.53e-14!39;UBERON:0000955!7.37e-14!50;UBERON:0006238!7.37e-14!50;UBERON:0002346!1.71e-13!71;UBERON:0003075!1.71e-13!71;UBERON:0007284!1.71e-13!71;UBERON:0002616!1.78e-13!49;UBERON:0004111!8.42e-13!122;UBERON:0000025!1.62e-12!114;UBERON:0004121!5.47e-12!102;UBERON:0000924!5.47e-12!102;UBERON:0006601!5.47e-12!102;UBERON:0002020!7.40e-12!34;UBERON:0002791!7.90e-11!29;UBERON:0003528!7.90e-11!29;UBERON:0001893!7.90e-11!29;UBERON:0000153!4.45e-10!94;UBERON:0007811!5.26e-08!86;UBERON:0000956!7.25e-08!21;UBERON:0001869!7.25e-08!21;UBERON:0000203!7.25e-08!21;UBERON:0000468!8.79e-08!333;UBERON:0000479!2.81e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.92e-16,64;UBERON:0003075,1.92e-16,64;UBERON:0007284,1.92e-16,64;UBERON:0001049,5.89e-16,52;UBERON:0005068,5.89e-16,52;UBERON:0006241,5.89e-16,52;UBERON:0007135,5.89e-16,52;UBERON:0001017,3.13e-15,73;UBERON:0001016,4.38e-15,75;UBERON:0010371,7.16e-15,73;UBERON:0000955,9.91e-15,47;UBERON:0006238,9.91e-15,47;UBERON:0000073,1.16e-14,54;UBERON:0003056,2.20e-14,49;UBERON:0002616,2.42e-14,46;UBERON:0003080,2.58e-14,40;UBERON:0004121,5.03e-14,95;UBERON:0000924,5.03e-14,95;UBERON:0006601,5.03e-14,95;UBERON:0002780,6.53e-14,39;UBERON:0001890,6.53e-14,39;UBERON:0006240,6.53e-14,39;UBERON:0010314,1.12e-13,92;UBERON:0004111,8.42e-13,122;UBERON:0000025,1.62e-12,114;UBERON:0002020,7.40e-12,34;UBERON:0003528,7.90e-11,29;UBERON:0002791,7.90e-11,29;UBERON:0001893,7.90e-11,29;UBERON:0000956,7.25e-08,21;UBERON:0001869,7.25e-08,21;UBERON:0000203,7.25e-08,21;UBERON:0000479,2.81e-07,349 | |||
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| |||
|short_description=p1@Zfp637 | |||
}} |
Latest revision as of 12:47, 26 September 2015
Short description: | p1@Zfp637 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfp637_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000112859, ENSMUST00000112861, ENSMUST00000127593, ENSMUST00000137224, ENSMUST00000164472, NM_177684, uc009dky.1, uc009dkz.1_5end |
EntrezGene: | Zfp637 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.65e-09 | 39 |
electrically active cell | 1.65e-09 | 39 |
CNS neuron (sensu Vertebrata) | 9.45e-09 | 23 |
neuroblast (sensu Vertebrata) | 9.45e-09 | 23 |
neuron | 1.08e-08 | 33 |
neuronal stem cell | 1.08e-08 | 33 |
neuroblast | 1.08e-08 | 33 |
electrically signaling cell | 1.08e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.92e-16 | 64 |
neural plate | 1.92e-16 | 64 |
presumptive neural plate | 1.92e-16 | 64 |
neural tube | 5.89e-16 | 52 |
neural rod | 5.89e-16 | 52 |
future spinal cord | 5.89e-16 | 52 |
neural keel | 5.89e-16 | 52 |
central nervous system | 3.13e-15 | 73 |
nervous system | 4.38e-15 | 75 |
ecto-epithelium | 7.16e-15 | 73 |
brain | 9.91e-15 | 47 |
future brain | 9.91e-15 | 47 |
regional part of nervous system | 1.16e-14 | 54 |
pre-chordal neural plate | 2.20e-14 | 49 |
regional part of brain | 2.42e-14 | 46 |
anterior neural tube | 2.58e-14 | 40 |
ectoderm-derived structure | 5.03e-14 | 95 |
ectoderm | 5.03e-14 | 95 |
presumptive ectoderm | 5.03e-14 | 95 |
regional part of forebrain | 6.53e-14 | 39 |
forebrain | 6.53e-14 | 39 |
future forebrain | 6.53e-14 | 39 |
structure with developmental contribution from neural crest | 1.12e-13 | 92 |
anatomical conduit | 8.42e-13 | 122 |
tube | 1.62e-12 | 114 |
gray matter | 7.40e-12 | 34 |
brain grey matter | 7.90e-11 | 29 |
regional part of telencephalon | 7.90e-11 | 29 |
telencephalon | 7.90e-11 | 29 |
cerebral cortex | 7.25e-08 | 21 |
cerebral hemisphere | 7.25e-08 | 21 |
pallium | 7.25e-08 | 21 |
tissue | 2.81e-07 | 349 |