FFCP PHASE1:Mm9::chr12:31758812..31758824,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=104943 | |EntrezGene=104943 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2778 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VE94 | |UniProt=Q8VE94 | ||
|association_with_transcript=-8bp_to_ENSMUST00000041133,NM_027828,uc007nhb.1_5end | |association_with_transcript=-8bp_to_ENSMUST00000041133,NM_027828,uc007nhb.1_5end | ||
|cluster_id=chr12:31758812..31758824,+ | |||
|description=CAGE_peak_3_at_Fam110c_5end | |description=CAGE_peak_3_at_Fam110c_5end | ||
|id=chr12:31758812..31758824,+ | |id=chr12:31758812..31758824,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.02e-08,6;CL:0000677,4.02e-08,6;CL:0000584,4.02e-08,6;CL:0002076,3.57e-07,15;CL:0000066,7.86e-07,25;CL:0000075,8.91e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.64e-18!59;UBERON:0000160!2.10e-13!43;UBERON:0001007!3.31e-13!128;UBERON:0001555!3.31e-13!128;UBERON:0007026!3.31e-13!128;UBERON:0004119!4.82e-13!130;UBERON:0000925!4.82e-13!130;UBERON:0006595!4.82e-13!130;UBERON:0004921!2.97e-12!126;UBERON:0004185!2.97e-12!126;UBERON:0000466!8.87e-10!79;UBERON:0000464!3.48e-09!57;UBERON:0000344!3.15e-08!15;UBERON:0002100!5.92e-08!98;UBERON:0004923!8.30e-08!24;UBERON:0002553!1.54e-07!39;UBERON:0001242!4.26e-07!13;UBERON:0000060!4.26e-07!13;UBERON:0001262!4.26e-07!13;UBERON:0004786!4.26e-07!13;UBERON:0003886!5.29e-07!38 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.73e-12,47;UBERON:0000160,1.06e-09,31;UBERON:0000344,1.67e-09,15;UBERON:0001007,3.32e-08,116;UBERON:0001555,3.32e-08,116;UBERON:0007026,3.32e-08,116;UBERON:0004119,7.20e-08,118;UBERON:0000925,7.20e-08,118;UBERON:0006595,7.20e-08,118;UBERON:0001242,1.16e-07,13;UBERON:0001262,1.16e-07,13;UBERON:0004786,1.16e-07,13;UBERON:0004921,3.37e-07,114 | |||
|phase1_expression=0.480446541314382,3.48975407639361,5.0049916332849,4.23449895829562,3.50627010962443,1.51091344720701,2.80335168714631,0,0,0,0,0,0,0,0.666219523631325,0.607425802169478,2.09868563438444,0,0,0,0.765389611359628,0,0,1.91990907352088,2.75291137280604,1.72269589234506,1.7230479846363,3.01659725760245,0.950117097281869,1.00812051903972,1.55211357458713,1.27006134691926,0,0,0.577703239502549,1.16364251750945,0.816677425049476,0,0,0.523523743973798,0,0.683045484958446,0.485510353031154,1.1330713617802,1.62203089951223,1.46837401729345,0,0.218025156380447,0.439372365468944,0,0,0,0,0,0,0.257259436035947,0.286533439938757,1.54701627683233,0,0,0,1.69422266034566,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.453429360640713,1.15945795480671,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,3.46385665617943,3.54703811665138,6.57181778519218,0.34255163915718,0,0.148442139064825,0,0,0,0,0.23517741427141,0.251333182659351,1.23597483867187,0.289198713839823,0,0,0,0.484875253135222,1.86391761218122,0,0,1.27728527604296,3.47463861067169,0.599902730993408,0.889491589511453,0,0,0,0,0,0,0,1.01839363850316,0.622034853050465,4.0435641349388,0.210441855886474,0,0,0,0,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0.398068533636986,0,0.257347907114715,0.284163499395593,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0,0.32833492815819,0,0,0,0,0,0,2.31293148088659,0.793351699990633,0,0.232236671860439,0.128867461322093,1.61346819698674,1.11189021922435,0.570676878337677,1.42358718463353,0.823494773620054,0.754005626400808,1.79060824837036,1.75467678407208,0,1.72910439899755,1.39398891278057,0.189667900953082,0.342745537829186,1.1270773567308,0.610953983535943,0.387904974335251,0.841629838683823,0.69560190836683,1.03327103585722,1.41298855057237,1.35736880313981,0,0.166845105716094,0.196558995113203,0.449724224769707,0.405720242777006,0.241177159752417,0.50925170356284,1.43848068725405,0.648540907100142,0.823684239564244,1.43768206527355,1.48856379067401,0.312037673114561,1.01031551178845,0.538192240565737,1.92977408545347,0.923765950833023,0,0.488894929326078,0,0.234690248288502,0.167506257441816,0.238043640886014,0.780534591431195,0.157635144106191,0.664394068946325,0.159454768657487,0.491589944147214,0.690739927463582,1.01254341007058,0,0,0.491764273019036,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.35613120733451,1.46598263418218,1.15479086080775,0,0.485561272309963,0.906970670894253,3.01768127609437,3.54362271456927,1.84461088766356,0.258428293168221,1.81766864738753,1.06949213515416,2.21225730555071,4.21674434299995,3.09406629744561,1.36175842301515,0,0.258717367565509,0,0.177340233642274,0.178368817602071,0,0.608929898229199,0.704015124191131,0,2.64634077665954,1.15420377059036,0.484393280087717,0.482503399425247,0.358117032009409,0.164140899745061,1.1659233465194,0,0.683483523191411,0.412773735926445,0.185194527369712,0.376736914009382,1.36694227721025,0.457556346413045,13.9382312594961,8.25713568709582,14.0963973280512,4.77335309007557,0.316335993581135,1.21991680276109,0.972048067396211,1.25452977608681,1.52853794622324,1.21377911746339,1.98368293740806,2.35580347785627,1.16653475962614,4.34937519160848,0,0.149516546043979,0.165458490457098,0.388902376688095,1.03327858782185,0.337912250981556,0.352071715937262,1.0416350787516,1.04859344425711,0.483168241652012,0,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0.906921534460845,0.221985953374065,0.269141569828427,0.671538465456314,4.25017106870819,2.25218970541418,1.64836461840539,3.42989406526505,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.551530525350042,0.44449345560323,0.206035057238894,0.64183841918363,0.758091635291392,0.50695859978048,0.188626341386076,0,0.192075457214608,0.17230640686684,0.476293691283074,0.695305955669133,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0.715308569841963,0.145346416632329,0.188218760830661,0.25384382367503,0.548783918618318,0.263069711437843,0.135804113845862,0,0.355905054372522,0,0.818462086339379,0.309873682371932,0.192906610981141,0,0.233931608445408,0.859484216193193,0.191288332068843,0,0 | |phase1_expression=0.480446541314382,3.48975407639361,5.0049916332849,4.23449895829562,3.50627010962443,1.51091344720701,2.80335168714631,0,0,0,0,0,0,0,0.666219523631325,0.607425802169478,2.09868563438444,0,0,0,0.765389611359628,0,0,1.91990907352088,2.75291137280604,1.72269589234506,1.7230479846363,3.01659725760245,0.950117097281869,1.00812051903972,1.55211357458713,1.27006134691926,0,0,0.577703239502549,1.16364251750945,0.816677425049476,0,0,0.523523743973798,0,0.683045484958446,0.485510353031154,1.1330713617802,1.62203089951223,1.46837401729345,0,0.218025156380447,0.439372365468944,0,0,0,0,0,0,0.257259436035947,0.286533439938757,1.54701627683233,0,0,0,1.69422266034566,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.453429360640713,1.15945795480671,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,3.46385665617943,3.54703811665138,6.57181778519218,0.34255163915718,0,0.148442139064825,0,0,0,0,0.23517741427141,0.251333182659351,1.23597483867187,0.289198713839823,0,0,0,0.484875253135222,1.86391761218122,0,0,1.27728527604296,3.47463861067169,0.599902730993408,0.889491589511453,0,0,0,0,0,0,0,1.01839363850316,0.622034853050465,4.0435641349388,0.210441855886474,0,0,0,0,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0.398068533636986,0,0.257347907114715,0.284163499395593,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0,0.32833492815819,0,0,0,0,0,0,2.31293148088659,0.793351699990633,0,0.232236671860439,0.128867461322093,1.61346819698674,1.11189021922435,0.570676878337677,1.42358718463353,0.823494773620054,0.754005626400808,1.79060824837036,1.75467678407208,0,1.72910439899755,1.39398891278057,0.189667900953082,0.342745537829186,1.1270773567308,0.610953983535943,0.387904974335251,0.841629838683823,0.69560190836683,1.03327103585722,1.41298855057237,1.35736880313981,0,0.166845105716094,0.196558995113203,0.449724224769707,0.405720242777006,0.241177159752417,0.50925170356284,1.43848068725405,0.648540907100142,0.823684239564244,1.43768206527355,1.48856379067401,0.312037673114561,1.01031551178845,0.538192240565737,1.92977408545347,0.923765950833023,0,0.488894929326078,0,0.234690248288502,0.167506257441816,0.238043640886014,0.780534591431195,0.157635144106191,0.664394068946325,0.159454768657487,0.491589944147214,0.690739927463582,1.01254341007058,0,0,0.491764273019036,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.35613120733451,1.46598263418218,1.15479086080775,0,0.485561272309963,0.906970670894253,3.01768127609437,3.54362271456927,1.84461088766356,0.258428293168221,1.81766864738753,1.06949213515416,2.21225730555071,4.21674434299995,3.09406629744561,1.36175842301515,0,0.258717367565509,0,0.177340233642274,0.178368817602071,0,0.608929898229199,0.704015124191131,0,2.64634077665954,1.15420377059036,0.484393280087717,0.482503399425247,0.358117032009409,0.164140899745061,1.1659233465194,0,0.683483523191411,0.412773735926445,0.185194527369712,0.376736914009382,1.36694227721025,0.457556346413045,13.9382312594961,8.25713568709582,14.0963973280512,4.77335309007557,0.316335993581135,1.21991680276109,0.972048067396211,1.25452977608681,1.52853794622324,1.21377911746339,1.98368293740806,2.35580347785627,1.16653475962614,4.34937519160848,0,0.149516546043979,0.165458490457098,0.388902376688095,1.03327858782185,0.337912250981556,0.352071715937262,1.0416350787516,1.04859344425711,0.483168241652012,0,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0.906921534460845,0.221985953374065,0.269141569828427,0.671538465456314,4.25017106870819,2.25218970541418,1.64836461840539,3.42989406526505,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.551530525350042,0.44449345560323,0.206035057238894,0.64183841918363,0.758091635291392,0.50695859978048,0.188626341386076,0,0.192075457214608,0.17230640686684,0.476293691283074,0.695305955669133,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0.715308569841963,0.145346416632329,0.188218760830661,0.25384382367503,0.548783918618318,0.263069711437843,0.135804113845862,0,0.355905054372522,0,0.818462086339379,0.309873682371932,0.192906610981141,0,0.233931608445408,0.859484216193193,0.191288332068843,0,0 | ||
|short_description=p3@Fam110c | |short_description=p3@Fam110c | ||
}} | }} |
Latest revision as of 13:05, 26 September 2015
Short description: | p3@Fam110c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fam110c_5end |
Coexpression cluster: | MCL_coexpression_mm9:2778 |
Association with transcript: | -8bp_to_ENSMUST00000041133, NM_027828, uc007nhb.1_5end |
EntrezGene: | Fam110c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.02e-08 | 6 |
gut absorptive cell | 4.02e-08 | 6 |
enterocyte | 4.02e-08 | 6 |
endo-epithelial cell | 3.57e-07 | 15 |
epithelial cell | 7.86e-07 | 25 |
columnar/cuboidal epithelial cell | 8.91e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.73e-12 | 47 |
intestine | 1.06e-09 | 31 |
mucosa | 1.67e-09 | 15 |
digestive system | 3.32e-08 | 116 |
digestive tract | 3.32e-08 | 116 |
primitive gut | 3.32e-08 | 116 |
endoderm-derived structure | 7.20e-08 | 118 |
endoderm | 7.20e-08 | 118 |
presumptive endoderm | 7.20e-08 | 118 |
intestinal mucosa | 1.16e-07 | 13 |
wall of intestine | 1.16e-07 | 13 |
gastrointestinal system mucosa | 1.16e-07 | 13 |
subdivision of digestive tract | 3.37e-07 | 114 |