FFCP PHASE1:Mm9::chr1:154655007..154655028,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:154655007..154655028,+
|short_description=p3@Ncf2
|description=CAGE_peak_3_at_Ncf2_5end
|association_with_transcript=0bp_to_ENSMUST00000027754,NM_010877_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17970 | |EntrezGene=17970 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=165 | |||
|TSSclassifier=NA | |||
|UniProt=O70145 | |UniProt=O70145 | ||
|association_with_transcript=0bp_to_ENSMUST00000027754,NM_010877_5end | |||
|cluster_id=chr1:154655007..154655028,+ | |||
|description=CAGE_peak_3_at_Ncf2_5end | |||
|id=chr1:154655007..154655028,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,4.54e-12,19;CL:0000988,4.96e-09,32;CL:0002032,4.96e-09,32;CL:0000037,4.96e-09,32;CL:0000837,4.96e-09,32;CL:0000763,7.69e-09,16;CL:0002320,2.63e-07,46;CL:0000134,2.63e-07,46;CL:0000557,5.61e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.22e-08!70;UBERON:0001474!1.40e-08!22;UBERON:0004765!1.40e-08!22;UBERON:0001434!1.40e-08!22;UBERON:0002193!1.73e-08!48;UBERON:0002371!2.42e-08!16;UBERON:0002390!3.48e-07!45;UBERON:0003061!3.48e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.14e-14,22;UBERON:0004765,1.14e-14,22;UBERON:0001434,1.14e-14,22;UBERON:0002371,1.18e-14,16;UBERON:0002193,5.54e-14,48;UBERON:0002405,5.54e-14,48;UBERON:0002204,4.34e-13,32;UBERON:0002390,1.66e-11,45;UBERON:0003061,1.66e-11,45;UBERON:0003887,3.13e-08,10;UBERON:0002384,2.63e-07,46;UBERON:0002106,7.41e-07,6;UBERON:0004457,7.41e-07,6;UBERON:0000042,7.41e-07,6;UBERON:0004854,7.41e-07,6;UBERON:0009034,7.41e-07,6;UBERON:0002095,7.41e-07,6;UBERON:0004782,7.41e-07,6;UBERON:0003281,7.41e-07,6;UBERON:0009664,7.41e-07,6;UBERON:0002296,7.41e-07,6;UBERON:0005602,7.41e-07,6;UBERON:0001179,7.41e-07,6;UBERON:0006293,7.41e-07,6 | |||
|phase1_expression=0.320297694209588,2.09385244583617,1.36499771816861,0,0,1.34303417529512,2.80335168714631,0.258246646883153,0.140788722151667,0,0,0,0.342401459862411,0,3.33109761815663,3.44207954562704,0.699561878128147,20.5050407482854,20.0187073064379,13.1560792057389,0.0850432901510698,5.95745707205312,13.3211892460857,2.07990149631429,3.67054849707472,1.72269589234506,3.01533397311352,3.44753972297422,0.190023419456374,0.252030129759931,0.886922042621219,0,0.61506478758457,0,0,0,0.204169356262369,23.8563029520037,22.6587249911902,28.7938059185589,20.5881020810855,26.6387739133794,27.1885797697446,0,0,0,0,0,0,0,0,0,19.2949996966397,0.725362142011344,0.672187598284928,0,0,0.515672092277442,0,0,0,0,0,1.7997994345628,3.9554654502679,4.9733608046227,1.19840044207362,0,0,0,0,0,0.441737081903227,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0.372798891650601,0,0,0.579728977403356,0.860423876981386,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.22836775943812,4.40194402200192,0.148442139064825,0.520455980298408,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0,0.247194967734374,0.433798070759735,16.8076004870476,0.485300549842228,3.09178125844551,1.93950101254089,0,0,0,0.766371165625774,9.58520996047362,4.79922184794726,13.4694440697449,0.299581278809645,0.915001205637253,0,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0.611036183101898,3.23458123586242,2.77995034277042,0.210441855886474,0,0,0,0.452114453507145,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0.348252166522167,0.61734640922383,0,5.61770549850588,12.8673953557358,6.53576048609863,0,0,0,0.23674473558521,0.787056926989615,0,0.465067889500816,0,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0.438599962275997,0.439100230582101,0.402619256281115,0.210289948564127,0,0.660837565967596,0,0,0.928946687441754,0.38660238396628,0,0.667134131534611,0.760902504450237,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0.432276099749388,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0.442830443938806,0.156998727841375,0,0,1.00107063429656,0.393117990226406,0.674586337154561,0.811440485554012,1.20588579876208,1.2731292589071,2.5892652370573,0.972811360650212,0.549122826376163,1.43768206527355,1.11642284300551,0.312037673114561,0.252578877947112,0,0.964887042726734,1.66277871149944,0.37898282354097,0.325929952884052,0.339490171550376,0.938760993154008,0.670025029767263,0.238043640886014,1.56106918286239,0.945810864637146,0.664394068946325,0.797273843287435,1.47476983244164,1.89953480052485,1.3018415272336,19.6028669121054,21.2123216689297,0.491764273019036,1.10374698521893,0.321101179975584,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.963963949265421,0.567760340833074,0.35613120733451,0,0.989820737835213,0,0,0,0.188605079755898,0.295301892880773,0.614870295887855,1.29214146584111,0,0.712994756769443,0.632073515871632,0,2.06271086496374,0,0,0.258717367565509,0.643011105094777,0.532020700926821,0.356737635204141,0.329098041204242,0.304464949114599,0.704015124191131,0.42366414172764,0,0.32977250588296,0.807322133479528,0.241251699712623,0.119372344003136,0.328281799490123,0.291480836629851,0.370850604021019,2.05045056957423,2.06386867963222,2.40752885580625,2.0720530270516,1.91371918809435,1.83022538565218,3.39956859987711,4.05859211738608,4.97519905695926,0.954670618015114,0.158167996790568,0.203319467126849,0.108005340821801,0.418176592028937,0,0.134864346384821,0.41326727862668,0.26175594198403,0.648074866458964,0.621339313086926,0,0.149516546043979,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.469428954583016,0.13020438484395,0.104859344425711,0,0,1.58005560314089,1.82452693761148,1.33524244314275,1.68897069871134,1.61124026100733,0.79472541912506,0.841368146639782,0.443068581523732,0.504832249740738,0.381034033274999,0.100826185136841,0.38983152295901,0.577271049841977,0.350630706544707,0.453460767230423,0,0,0,0.965947970160952,1.12609485270709,0.36630324853453,1.50057865355346,1.00314420807073,0,0.460325236507177,0,0.343706364687375,0.685082519770642,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0.888986911206461,0.206035057238894,0.64183841918363,0,0,0.188626341386076,0.280924522409647,0.448176066834085,0.0574354689556133,0,0.347652977834566,0.578727661391115,0.412085900803307,0.735994600671987,1.02860775715625,0.70990322463735,0.953744759789284,0.290692833264657,0.752875043322645,0.338458431566706,1.28049581010941,0.263069711437843,0.135804113845862,0.561142271657738,0.474540072496697,0.197008964751127,0,0.309873682371932,0.771626443924566,0.249810577937946,0.701794825336225,0.429742108096597,0.765153328275374,1.10295709559758,1.15933917810211 | |phase1_expression=0.320297694209588,2.09385244583617,1.36499771816861,0,0,1.34303417529512,2.80335168714631,0.258246646883153,0.140788722151667,0,0,0,0.342401459862411,0,3.33109761815663,3.44207954562704,0.699561878128147,20.5050407482854,20.0187073064379,13.1560792057389,0.0850432901510698,5.95745707205312,13.3211892460857,2.07990149631429,3.67054849707472,1.72269589234506,3.01533397311352,3.44753972297422,0.190023419456374,0.252030129759931,0.886922042621219,0,0.61506478758457,0,0,0,0.204169356262369,23.8563029520037,22.6587249911902,28.7938059185589,20.5881020810855,26.6387739133794,27.1885797697446,0,0,0,0,0,0,0,0,0,19.2949996966397,0.725362142011344,0.672187598284928,0,0,0.515672092277442,0,0,0,0,0,1.7997994345628,3.9554654502679,4.9733608046227,1.19840044207362,0,0,0,0,0,0.441737081903227,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0.372798891650601,0,0,0.579728977403356,0.860423876981386,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.22836775943812,4.40194402200192,0.148442139064825,0.520455980298408,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0,0.247194967734374,0.433798070759735,16.8076004870476,0.485300549842228,3.09178125844551,1.93950101254089,0,0,0,0.766371165625774,9.58520996047362,4.79922184794726,13.4694440697449,0.299581278809645,0.915001205637253,0,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0.611036183101898,3.23458123586242,2.77995034277042,0.210441855886474,0,0,0,0.452114453507145,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0.348252166522167,0.61734640922383,0,5.61770549850588,12.8673953557358,6.53576048609863,0,0,0,0.23674473558521,0.787056926989615,0,0.465067889500816,0,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0.438599962275997,0.439100230582101,0.402619256281115,0.210289948564127,0,0.660837565967596,0,0,0.928946687441754,0.38660238396628,0,0.667134131534611,0.760902504450237,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0.432276099749388,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0.442830443938806,0.156998727841375,0,0,1.00107063429656,0.393117990226406,0.674586337154561,0.811440485554012,1.20588579876208,1.2731292589071,2.5892652370573,0.972811360650212,0.549122826376163,1.43768206527355,1.11642284300551,0.312037673114561,0.252578877947112,0,0.964887042726734,1.66277871149944,0.37898282354097,0.325929952884052,0.339490171550376,0.938760993154008,0.670025029767263,0.238043640886014,1.56106918286239,0.945810864637146,0.664394068946325,0.797273843287435,1.47476983244164,1.89953480052485,1.3018415272336,19.6028669121054,21.2123216689297,0.491764273019036,1.10374698521893,0.321101179975584,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.963963949265421,0.567760340833074,0.35613120733451,0,0.989820737835213,0,0,0,0.188605079755898,0.295301892880773,0.614870295887855,1.29214146584111,0,0.712994756769443,0.632073515871632,0,2.06271086496374,0,0,0.258717367565509,0.643011105094777,0.532020700926821,0.356737635204141,0.329098041204242,0.304464949114599,0.704015124191131,0.42366414172764,0,0.32977250588296,0.807322133479528,0.241251699712623,0.119372344003136,0.328281799490123,0.291480836629851,0.370850604021019,2.05045056957423,2.06386867963222,2.40752885580625,2.0720530270516,1.91371918809435,1.83022538565218,3.39956859987711,4.05859211738608,4.97519905695926,0.954670618015114,0.158167996790568,0.203319467126849,0.108005340821801,0.418176592028937,0,0.134864346384821,0.41326727862668,0.26175594198403,0.648074866458964,0.621339313086926,0,0.149516546043979,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.469428954583016,0.13020438484395,0.104859344425711,0,0,1.58005560314089,1.82452693761148,1.33524244314275,1.68897069871134,1.61124026100733,0.79472541912506,0.841368146639782,0.443068581523732,0.504832249740738,0.381034033274999,0.100826185136841,0.38983152295901,0.577271049841977,0.350630706544707,0.453460767230423,0,0,0,0.965947970160952,1.12609485270709,0.36630324853453,1.50057865355346,1.00314420807073,0,0.460325236507177,0,0.343706364687375,0.685082519770642,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0.888986911206461,0.206035057238894,0.64183841918363,0,0,0.188626341386076,0.280924522409647,0.448176066834085,0.0574354689556133,0,0.347652977834566,0.578727661391115,0.412085900803307,0.735994600671987,1.02860775715625,0.70990322463735,0.953744759789284,0.290692833264657,0.752875043322645,0.338458431566706,1.28049581010941,0.263069711437843,0.135804113845862,0.561142271657738,0.474540072496697,0.197008964751127,0,0.309873682371932,0.771626443924566,0.249810577937946,0.701794825336225,0.429742108096597,0.765153328275374,1.10295709559758,1.15933917810211 | ||
|short_description=p3@Ncf2 | |||
}} | }} |
Latest revision as of 13:41, 26 September 2015
Short description: | p3@Ncf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ncf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:165 |
Association with transcript: | 0bp_to_ENSMUST00000027754, NM_010877_5end |
EntrezGene: | Ncf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 4.54e-12 | 19 |
hematopoietic cell | 4.96e-09 | 32 |
hematopoietic oligopotent progenitor cell | 4.96e-09 | 32 |
hematopoietic stem cell | 4.96e-09 | 32 |
hematopoietic multipotent progenitor cell | 4.96e-09 | 32 |
myeloid cell | 7.69e-09 | 16 |
connective tissue cell | 2.63e-07 | 46 |
mesenchymal cell | 2.63e-07 | 46 |
granulocyte monocyte progenitor cell | 5.61e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.14e-14 | 22 |
skeletal element | 1.14e-14 | 22 |
skeletal system | 1.14e-14 | 22 |
bone marrow | 1.18e-14 | 16 |
hemolymphoid system | 5.54e-14 | 48 |
immune system | 5.54e-14 | 48 |
musculoskeletal system | 4.34e-13 | 32 |
hematopoietic system | 1.66e-11 | 45 |
blood island | 1.66e-11 | 45 |
intraembryonic coelom | 3.13e-08 | 10 |
connective tissue | 2.63e-07 | 46 |
spleen | 7.41e-07 | 6 |
cavity lining | 7.41e-07 | 6 |
serous membrane | 7.41e-07 | 6 |
gastrointestinal system mesentery | 7.41e-07 | 6 |
stomach region | 7.41e-07 | 6 |
mesentery | 7.41e-07 | 6 |
gastrointestinal system serosa | 7.41e-07 | 6 |
mesentery of stomach | 7.41e-07 | 6 |
gut mesentery | 7.41e-07 | 6 |
dorsal mesentery | 7.41e-07 | 6 |
dorsal mesogastrium | 7.41e-07 | 6 |
peritoneal cavity | 7.41e-07 | 6 |
spleen primordium | 7.41e-07 | 6 |