FFCP PHASE1:Mm9::chr2:31325808..31325830,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:31325808..31325830,+ to FFCP PHASE1:Mm9::chr2:31325808..31325830,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=11898 | |EntrezGene=11898 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=120 | |||
|TSSclassifier=NA | |||
|UniProt=P16460,Q3UJ34 | |UniProt=P16460,Q3UJ34 | ||
|association_with_transcript=18bp_to_NM_007494,uc008jdu.1_5end | |||
|cluster_id=chr2:31325808..31325830,+ | |||
|description=CAGE_peak_1_at_Ass1_5end | |||
|id=chr2:31325808..31325830,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.44e-11!22;UBERON:0007499!1.44e-11!22;UBERON:0006925!1.44e-11!22;UBERON:0009497!1.44e-11!22;UBERON:0000015!1.44e-11!22;UBERON:0002423!1.44e-11!22;UBERON:0006235!1.44e-11!22;UBERON:0008835!1.44e-11!22;UBERON:0003894!1.44e-11!22;UBERON:0004161!1.44e-11!22;UBERON:0008836!1.44e-11!22;UBERON:0009854!2.93e-11!23;UBERON:0009856!2.93e-11!23;UBERON:0002365!4.90e-11!25;UBERON:0002330!4.90e-11!25;UBERON:0005172!4.77e-09!49;UBERON:0005173!4.77e-09!49;UBERON:0002417!4.77e-09!49;UBERON:0000916!4.77e-09!49;UBERON:0009569!3.50e-07!66;UBERON:0005256!4.22e-07!47;UBERON:0005177!4.81e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.35e-11,22;UBERON:0007499,1.35e-11,22;UBERON:0006925,1.35e-11,22;UBERON:0009497,1.35e-11,22;UBERON:0000015,1.35e-11,22;UBERON:0002423,1.35e-11,22;UBERON:0006235,1.35e-11,22;UBERON:0008835,1.35e-11,22;UBERON:0003894,1.35e-11,22;UBERON:0004161,1.35e-11,22;UBERON:0008836,1.35e-11,22;UBERON:0009854,2.74e-11,23;UBERON:0009856,2.74e-11,23;UBERON:0002365,4.58e-11,25;UBERON:0002330,4.58e-11,25;UBERON:0002100,2.74e-09,90;UBERON:0005172,4.53e-09,49;UBERON:0005173,4.53e-09,49;UBERON:0002417,4.53e-09,49;UBERON:0000916,4.53e-09,49;UBERON:0005177,5.10e-09,79;UBERON:0005256,1.55e-08,45;UBERON:0003104,4.07e-08,61;UBERON:0009142,4.07e-08,61;UBERON:0009569,3.37e-07,66 | |||
|phase1_expression=0,0,0.454999239389536,0.30246421130683,1.50268718983904,0.671517087647559,0.700837921786577,32.6682008307188,22.5261955442667,16.1504523162175,6.33506482434368,6.94017783259427,35.0961496358972,27.0129043474702,0.999329285446988,1.82227740650843,0.699561878128147,5.67831897644828,5.07323404341233,2.12194825899015,83.7676407988037,20.8510997521859,10.9703911438353,2.87986361028132,3.44113921600755,0.57423196411502,0.430761996159075,0.215471232685889,0.570070258369122,0.756090389279792,0.221730510655305,0,0.61506478758457,0,1.1554064790051,2.32728503501889,2.6542016314108,2.51118978442145,10.1573594788094,5.75876118371178,0,0,0.971020706062307,39.2798072083801,45.6196190487816,15.6014739337429,42.2491325947941,14.171635164729,15.378032791413,13.4156630361256,4.75953833526233,15.8127820801469,3.52343472721246,23.211588544363,12.0993767691287,5.14518872071894,3.72493471920384,8.25075347643908,1.01158230429799,0,0,31.1736969503602,14.2287167377782,26.0970918011606,14.8329954385046,14.209602298922,8.08920298399693,12.2949857702897,0,0,0,2.85650984403804,2.42955395046775,0.122490799214954,0.0958454710182364,0,4.40463523997555,7.40586560894089,8.44835932909339,0.395658863190582,0.548925861614458,0.52091337055676,4.74611098302348,10.1297269805702,9.77908785771585,0.883885756421003,1.13897344639282,0.559198337475902,1.06016670666458,2.34271836331035,5.79728977403356,1210.61639491281,472.580076926887,726.440495944502,1220.92988838417,1152.77318050144,314.595501095124,1.36344258062446,1.81850203222008,0.70667914902068,0.14084341977668,0,0,0,14.2884087067401,17.2284708523067,15.6712577954583,504.806932237964,17.3488382043605,12.9144660986398,1.90833859442749,8.52503339273995,13.1450833435953,7.23468674652588,21.2835559915626,7.41432888845085,70.6977607720309,3.61498392299779,12.3845477272982,0.808834249737046,1.54589062922275,3.39412677194655,9.31958806090611,2.63502717310392,1.67557365450764,4.34276993854605,14.3778149407104,11.3981518888747,16.6461997465715,15.7280171375064,10.0650132620098,0.628271760564322,7.12679712788333,2.81287003063364,16.6230435647648,7.78758062725237,2.64782346010822,5.10068579501381,10.867078612648,4.62972082950243,1.56144531555244,1.60931473103431,4.32149111532838,7.83665052745718,10.8178033650611,11.5302348256365,15.9292931751539,10.8655415710387,1.07783996466421,0.945530400839096,1.58356011747554,3.28793598641362,1.66828349535359,5.2237824978325,5.35033554660653,2.58744546864041,18.9597560574573,14.9261786126535,19.6072814582959,2.27838349789052,1.87620847984877,0.720248245844059,2.13070262026689,0.983821158737019,2.00547246753592,1.16266972375204,1.07309360559848,1.05088808130453,0.822799249567402,0.985004784474571,0.972825714550269,1.16959989940266,1.75640092232841,1.20785776884335,8.62188789112922,1.54356918568927,0,3.17340679996253,1.70630600428187,3.0190767341857,11.5980715189884,65.5471455025863,116.303716930867,229.792556343971,5.21981967698963,170.298719184627,124.913598773734,125.342577385925,96.3122590368453,1.79763881730844,5.18731319699266,4.58024928485045,2.65535061334314,4.68418901699888,12.3978509240388,23.0126000465205,38.0146874848546,96.0860732497364,200.712768832393,415.67017671056,357.48610329481,573.550017908529,1124.44481454156,8.67594549723689,24.3733153940372,20.9121764517914,50.5121702257372,113.594442243388,174.927960173835,237.63700953437,584.173222070453,189.172813686588,79.072513590045,229.983105659135,302.052467574895,686.256811382303,1511.96140116268,2790.45332756572,10.7156850296631,1.32643988239339,2.77040459951444,2.20668611507745,5.63256595892405,20.7707759227852,30.9456733151818,10.7323506321789,3.15270288212382,7.9727288273559,3.50800491046472,3.60499292374624,4.31712454664739,5.49666422609744,4.52373851817817,39.1612092349471,16.7199852826472,11.0374698521893,10.2752377592187,7.73597131508541,2.62295912602681,0.757412781613119,271.652576917397,278.382824683503,229.210495187698,148.87756112444,86.2230868698865,52.9353112575117,303.608026256171,211.008729411967,224.918745651572,8.03303291054518,7.09700426041343,9.08134578703002,2.11753047159649,7.75359577970917,5.30980553359851,1.94224508923985,27.2091201268276,124.290747559137,172.751607335252,153.41013882402,72.3599220871019,9.81541069589265,23.5288269733916,20.542389265828,8.4334886859999,15.470331487228,34.3844001811326,0.900305470156551,0.646793418913773,0.857348140126369,0.532020700926821,1.42695054081656,3.1264313914403,39.8849083340125,53.2704777304622,44.4847348814022,22.4938966016061,16.3237390412065,8.39615018818709,9.52944213864862,24.3519581766398,36.1109979439135,13.9910801582328,7.6024373824309,5.98048082792484,7.01715351074956,1.66675074632741,3.01389531207506,2.05041341581538,5.71945433016307,8.15896463970505,10.9162132812453,13.1289975114203,10.5013767981662,1.73984796469624,12.8091264289915,17.38885987231,17.1452402731864,29.478946105734,11.5983337890946,22.4817399572914,9.42321391142507,2.98114438571124,7.45607175704311,11.837551712368,5.38259565758324,4.30192075188454,7.19469396872976,8.78286799648571,10.1373675294467,7.3935060346825,13.150642869239,7.02557607652263,2.17425708743405,7.4887801627045,4.4241556887945,2.8381530140623,5.34096977257102,4.02754551231165,3.93858730468459,3.17890167650024,4.80781798079875,3.83992770653901,5.14928894735553,5.25826965919499,7.66279007039988,6.33476224808391,3.94468550725351,6.19447581562315,7.70883304291719,72.3674207999451,117.973721441461,115.336731442122,11.7845652359636,1.31377732815827,12.0880072016395,15.0057865355346,27.0848936179096,1.6942555278512,0.920650473014354,0,0.68741272937475,2.74033007908257,1.5107877947794,0.675022500231806,2.70192721934532,2.71885445390523,0.51776031175182,1.55681021376265,1.59609949360412,3.24393850932855,10.6966955510049,17.8171188233785,24.6350301323019,27.1141007917971,27.6086976700118,17.0087181083662,25.2697211763797,22.3061783903411,20.3716448696962,23.5040183749405,22.9850297133481,24.7546871198693,28.1013277857013,23.5245181668057,16.7831021803423,31.3185284610513,12.8063060516926,13.0290315906458,15.795346748181,20.028639955575,16.4241450794531,11.387235030255,13.7075664784516,19.7562210702594,28.411528835287,24.7163487199468,24.6902599529405,24.2015436973315,22.1635085345018,6.54769669071503,20.2967261953615,27.7785519812844,4.24677982494508,40.9380314779465,44.2634371339495,2.48674831689496,5.7353768971074,3.01428186306548 | |phase1_expression=0,0,0.454999239389536,0.30246421130683,1.50268718983904,0.671517087647559,0.700837921786577,32.6682008307188,22.5261955442667,16.1504523162175,6.33506482434368,6.94017783259427,35.0961496358972,27.0129043474702,0.999329285446988,1.82227740650843,0.699561878128147,5.67831897644828,5.07323404341233,2.12194825899015,83.7676407988037,20.8510997521859,10.9703911438353,2.87986361028132,3.44113921600755,0.57423196411502,0.430761996159075,0.215471232685889,0.570070258369122,0.756090389279792,0.221730510655305,0,0.61506478758457,0,1.1554064790051,2.32728503501889,2.6542016314108,2.51118978442145,10.1573594788094,5.75876118371178,0,0,0.971020706062307,39.2798072083801,45.6196190487816,15.6014739337429,42.2491325947941,14.171635164729,15.378032791413,13.4156630361256,4.75953833526233,15.8127820801469,3.52343472721246,23.211588544363,12.0993767691287,5.14518872071894,3.72493471920384,8.25075347643908,1.01158230429799,0,0,31.1736969503602,14.2287167377782,26.0970918011606,14.8329954385046,14.209602298922,8.08920298399693,12.2949857702897,0,0,0,2.85650984403804,2.42955395046775,0.122490799214954,0.0958454710182364,0,4.40463523997555,7.40586560894089,8.44835932909339,0.395658863190582,0.548925861614458,0.52091337055676,4.74611098302348,10.1297269805702,9.77908785771585,0.883885756421003,1.13897344639282,0.559198337475902,1.06016670666458,2.34271836331035,5.79728977403356,1210.61639491281,472.580076926887,726.440495944502,1220.92988838417,1152.77318050144,314.595501095124,1.36344258062446,1.81850203222008,0.70667914902068,0.14084341977668,0,0,0,14.2884087067401,17.2284708523067,15.6712577954583,504.806932237964,17.3488382043605,12.9144660986398,1.90833859442749,8.52503339273995,13.1450833435953,7.23468674652588,21.2835559915626,7.41432888845085,70.6977607720309,3.61498392299779,12.3845477272982,0.808834249737046,1.54589062922275,3.39412677194655,9.31958806090611,2.63502717310392,1.67557365450764,4.34276993854605,14.3778149407104,11.3981518888747,16.6461997465715,15.7280171375064,10.0650132620098,0.628271760564322,7.12679712788333,2.81287003063364,16.6230435647648,7.78758062725237,2.64782346010822,5.10068579501381,10.867078612648,4.62972082950243,1.56144531555244,1.60931473103431,4.32149111532838,7.83665052745718,10.8178033650611,11.5302348256365,15.9292931751539,10.8655415710387,1.07783996466421,0.945530400839096,1.58356011747554,3.28793598641362,1.66828349535359,5.2237824978325,5.35033554660653,2.58744546864041,18.9597560574573,14.9261786126535,19.6072814582959,2.27838349789052,1.87620847984877,0.720248245844059,2.13070262026689,0.983821158737019,2.00547246753592,1.16266972375204,1.07309360559848,1.05088808130453,0.822799249567402,0.985004784474571,0.972825714550269,1.16959989940266,1.75640092232841,1.20785776884335,8.62188789112922,1.54356918568927,0,3.17340679996253,1.70630600428187,3.0190767341857,11.5980715189884,65.5471455025863,116.303716930867,229.792556343971,5.21981967698963,170.298719184627,124.913598773734,125.342577385925,96.3122590368453,1.79763881730844,5.18731319699266,4.58024928485045,2.65535061334314,4.68418901699888,12.3978509240388,23.0126000465205,38.0146874848546,96.0860732497364,200.712768832393,415.67017671056,357.48610329481,573.550017908529,1124.44481454156,8.67594549723689,24.3733153940372,20.9121764517914,50.5121702257372,113.594442243388,174.927960173835,237.63700953437,584.173222070453,189.172813686588,79.072513590045,229.983105659135,302.052467574895,686.256811382303,1511.96140116268,2790.45332756572,10.7156850296631,1.32643988239339,2.77040459951444,2.20668611507745,5.63256595892405,20.7707759227852,30.9456733151818,10.7323506321789,3.15270288212382,7.9727288273559,3.50800491046472,3.60499292374624,4.31712454664739,5.49666422609744,4.52373851817817,39.1612092349471,16.7199852826472,11.0374698521893,10.2752377592187,7.73597131508541,2.62295912602681,0.757412781613119,271.652576917397,278.382824683503,229.210495187698,148.87756112444,86.2230868698865,52.9353112575117,303.608026256171,211.008729411967,224.918745651572,8.03303291054518,7.09700426041343,9.08134578703002,2.11753047159649,7.75359577970917,5.30980553359851,1.94224508923985,27.2091201268276,124.290747559137,172.751607335252,153.41013882402,72.3599220871019,9.81541069589265,23.5288269733916,20.542389265828,8.4334886859999,15.470331487228,34.3844001811326,0.900305470156551,0.646793418913773,0.857348140126369,0.532020700926821,1.42695054081656,3.1264313914403,39.8849083340125,53.2704777304622,44.4847348814022,22.4938966016061,16.3237390412065,8.39615018818709,9.52944213864862,24.3519581766398,36.1109979439135,13.9910801582328,7.6024373824309,5.98048082792484,7.01715351074956,1.66675074632741,3.01389531207506,2.05041341581538,5.71945433016307,8.15896463970505,10.9162132812453,13.1289975114203,10.5013767981662,1.73984796469624,12.8091264289915,17.38885987231,17.1452402731864,29.478946105734,11.5983337890946,22.4817399572914,9.42321391142507,2.98114438571124,7.45607175704311,11.837551712368,5.38259565758324,4.30192075188454,7.19469396872976,8.78286799648571,10.1373675294467,7.3935060346825,13.150642869239,7.02557607652263,2.17425708743405,7.4887801627045,4.4241556887945,2.8381530140623,5.34096977257102,4.02754551231165,3.93858730468459,3.17890167650024,4.80781798079875,3.83992770653901,5.14928894735553,5.25826965919499,7.66279007039988,6.33476224808391,3.94468550725351,6.19447581562315,7.70883304291719,72.3674207999451,117.973721441461,115.336731442122,11.7845652359636,1.31377732815827,12.0880072016395,15.0057865355346,27.0848936179096,1.6942555278512,0.920650473014354,0,0.68741272937475,2.74033007908257,1.5107877947794,0.675022500231806,2.70192721934532,2.71885445390523,0.51776031175182,1.55681021376265,1.59609949360412,3.24393850932855,10.6966955510049,17.8171188233785,24.6350301323019,27.1141007917971,27.6086976700118,17.0087181083662,25.2697211763797,22.3061783903411,20.3716448696962,23.5040183749405,22.9850297133481,24.7546871198693,28.1013277857013,23.5245181668057,16.7831021803423,31.3185284610513,12.8063060516926,13.0290315906458,15.795346748181,20.028639955575,16.4241450794531,11.387235030255,13.7075664784516,19.7562210702594,28.411528835287,24.7163487199468,24.6902599529405,24.2015436973315,22.1635085345018,6.54769669071503,20.2967261953615,27.7785519812844,4.24677982494508,40.9380314779465,44.2634371339495,2.48674831689496,5.7353768971074,3.01428186306548 | ||
|short_description=p1@Ass1 | |||
}} | }} |
Latest revision as of 13:42, 26 September 2015
Short description: | p1@Ass1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ass1_5end |
Coexpression cluster: | MCL_coexpression_mm9:120 |
Association with transcript: | 18bp_to_NM_007494, uc008jdu.1_5end |
EntrezGene: | Ass1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 1.35e-11 | 22 |
epithelial sac | 1.35e-11 | 22 |
digestive gland | 1.35e-11 | 22 |
epithelium of foregut-midgut junction | 1.35e-11 | 22 |
anatomical boundary | 1.35e-11 | 22 |
hepatobiliary system | 1.35e-11 | 22 |
foregut-midgut junction | 1.35e-11 | 22 |
hepatic diverticulum | 1.35e-11 | 22 |
liver primordium | 1.35e-11 | 22 |
septum transversum | 1.35e-11 | 22 |
liver bud | 1.35e-11 | 22 |
digestive tract diverticulum | 2.74e-11 | 23 |
sac | 2.74e-11 | 23 |
exocrine gland | 4.58e-11 | 25 |
exocrine system | 4.58e-11 | 25 |
trunk | 2.74e-09 | 90 |
abdomen element | 4.53e-09 | 49 |
abdominal segment element | 4.53e-09 | 49 |
abdominal segment of trunk | 4.53e-09 | 49 |
abdomen | 4.53e-09 | 49 |
trunk region element | 5.10e-09 | 79 |
trunk mesenchyme | 1.55e-08 | 45 |
mesenchyme | 4.07e-08 | 61 |
entire embryonic mesenchyme | 4.07e-08 | 61 |
subdivision of trunk | 3.37e-07 | 66 |