FFCP PHASE1:Mm9::chr1:154655078..154655089,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17970 | |EntrezGene=17970 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=O70145 | |UniProt=O70145 | ||
|association_with_transcript=58bp_to_ENSMUST00000027754,NM_010877_5end | |association_with_transcript=58bp_to_ENSMUST00000027754,NM_010877_5end | ||
|cluster_id=chr1:154655078..154655089,+ | |||
|description=CAGE_peak_4_at_Ncf2_5end | |description=CAGE_peak_4_at_Ncf2_5end | ||
|id=chr1:154655078..154655089,+ | |id=chr1:154655078..154655089,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000049,3.59e-12,19;CL:0000557,3.48e-09,7;CL:0002476,7.47e-09,2;CL:0000988,1.03e-08,32;CL:0002032,1.03e-08,32;CL:0000037,1.03e-08,32;CL:0000837,1.03e-08,32;CL:0000034,5.97e-08,97;CL:0002320,4.72e-07,46;CL:0000134,4.72e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,9.26e-14,3;DOID:4045,9.26e-14,3;DOID:0050686,4.28e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002204!4.18e-08!32;UBERON:0001474!2.34e-07!22;UBERON:0004765!2.34e-07!22;UBERON:0001434!2.34e-07!22;UBERON:0002529!4.38e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.83e-09,32;UBERON:0002371,2.39e-08,16;UBERON:0002384,4.72e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.315462165358238,1.09691546884591,0,0.0850432901510698,0.0992909512008853,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,74.9171619019065,25.7840663692854,46.593613213668,75.2936304679698,64.2062755860939,51.9496077743334,0,0,0,0,0,0,0,0,0,4.19456515144341,0,0.672187598284928,0,0,0,0,0,0,0,0,0,1.97773272513395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0,0.884610551949874,0.485300549842228,0.220841518460394,0.969750506270444,0,0,0,0.255457055208591,2.03685711660064,1.19980546198682,2.28726408731516,0,0,0,0,0,0,0,0,0.870848794270651,0,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,1.80143534980301,1.70498099637356,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0.324270453550071,0,0,0.372140947668503,0.312037673114561,0,0,0,0.369506380333209,0.189491411770485,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0.478364305972461,0.163863314715738,1.03610989119537,0,3.01582567878545,1.08781136763742,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0.18542530201051,0.512612642393558,1.23832120777933,2.59272338317596,0.565105371014073,0.136694227721025,0,1.86976272993241,2.51912614182584,3.04039942369732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337912250981556,0.234714477291508,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.315462165358238,1.09691546884591,0,0.0850432901510698,0.0992909512008853,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,74.9171619019065,25.7840663692854,46.593613213668,75.2936304679698,64.2062755860939,51.9496077743334,0,0,0,0,0,0,0,0,0,4.19456515144341,0,0.672187598284928,0,0,0,0,0,0,0,0,0,1.97773272513395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0,0.884610551949874,0.485300549842228,0.220841518460394,0.969750506270444,0,0,0,0.255457055208591,2.03685711660064,1.19980546198682,2.28726408731516,0,0,0,0,0,0,0,0,0.870848794270651,0,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,1.80143534980301,1.70498099637356,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0.324270453550071,0,0,0.372140947668503,0.312037673114561,0,0,0,0.369506380333209,0.189491411770485,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0.478364305972461,0.163863314715738,1.03610989119537,0,3.01582567878545,1.08781136763742,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0.18542530201051,0.512612642393558,1.23832120777933,2.59272338317596,0.565105371014073,0.136694227721025,0,1.86976272993241,2.51912614182584,3.04039942369732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337912250981556,0.234714477291508,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0.429742108096597,0,0,0 | ||
|short_description=p4@Ncf2 | |short_description=p4@Ncf2 | ||
}} | }} |
Latest revision as of 13:42, 26 September 2015
Short description: | p4@Ncf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ncf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 58bp_to_ENSMUST00000027754, NM_010877_5end |
EntrezGene: | Ncf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 3.59e-12 | 19 |
granulocyte monocyte progenitor cell | 3.48e-09 | 7 |
bone marrow macrophage | 7.47e-09 | 2 |
hematopoietic cell | 1.03e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.03e-08 | 32 |
hematopoietic stem cell | 1.03e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.03e-08 | 32 |
stem cell | 5.97e-08 | 97 |
connective tissue cell | 4.72e-07 | 46 |
mesenchymal cell | 4.72e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 5.83e-09 | 32 |
bone marrow | 2.39e-08 | 16 |
connective tissue | 4.72e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 9.26e-14 | 3 |
muscle cancer | 9.26e-14 | 3 |
organ system cancer | 4.28e-07 | 6 |