FFCP PHASE1:Mm9::chr4:137882149..137882220,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:137882149..137882220,-
|short_description=p1@Pink1
|description=CAGE_peak_1_at_Pink1_5end
|association_with_transcript=0bp_to_ENSMUST00000105817,NM_026880,...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=68943 | |EntrezGene=68943 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1132 | |||
|TSSclassifier=NA | |||
|UniProt=A2AM78,Q99MQ3 | |UniProt=A2AM78,Q99MQ3 | ||
|association_with_transcript=0bp_to_ENSMUST00000105817,NM_026880,uc008vku.1,uc008vkv.1_5end | |||
|cluster_id=chr4:137882149..137882220,- | |||
|description=CAGE_peak_1_at_Pink1_5end | |||
|id=chr4:137882149..137882220,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!4.44e-13!122;UBERON:0000025!1.62e-11!114;UBERON:0000955!1.32e-10!50;UBERON:0006238!1.32e-10!50;UBERON:0001017!1.88e-10!73;UBERON:0005743!1.88e-10!73;UBERON:0000033!2.43e-10!63;UBERON:0002616!3.49e-10!49;UBERON:0001049!5.05e-10!52;UBERON:0005068!5.05e-10!52;UBERON:0006241!5.05e-10!52;UBERON:0007135!5.05e-10!52;UBERON:0004121!7.95e-10!102;UBERON:0000924!7.95e-10!102;UBERON:0006601!7.95e-10!102;UBERON:0000073!2.57e-09!75;UBERON:0001016!2.57e-09!75;UBERON:0007023!4.88e-09!51;UBERON:0002020!3.50e-08!34;UBERON:0000062!5.70e-08!269;UBERON:0002346!1.01e-07!71;UBERON:0003075!1.01e-07!71;UBERON:0007284!1.01e-07!71;UBERON:0002791!1.72e-07!29;UBERON:0003528!1.72e-07!29;UBERON:0001893!1.72e-07!29;UBERON:0000480!9.45e-07!308;UBERON:0000467!9.45e-07!308 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,4.44e-13,122;UBERON:0000025,1.62e-11,114;UBERON:0000073,5.65e-11,54;UBERON:0001017,1.88e-10,73;UBERON:0001049,5.05e-10,52;UBERON:0005068,5.05e-10,52;UBERON:0006241,5.05e-10,52;UBERON:0007135,5.05e-10,52;UBERON:0004121,7.13e-10,95;UBERON:0000924,7.13e-10,95;UBERON:0006601,7.13e-10,95;UBERON:0010314,2.38e-09,92;UBERON:0001016,2.57e-09,75;UBERON:0000955,4.16e-09,47;UBERON:0006238,4.16e-09,47;UBERON:0007023,4.88e-09,51;UBERON:0002616,1.05e-08,46;UBERON:0002020,3.50e-08,34;UBERON:0010371,4.51e-08,73;UBERON:0002346,6.89e-08,64;UBERON:0003075,6.89e-08,64;UBERON:0007284,6.89e-08,64;UBERON:0003528,1.72e-07,29;UBERON:0002791,1.72e-07,29;UBERON:0001893,1.72e-07,29 | |||
|phase1_expression=94.007373250514,202.05676102319,248.429584706687,244.693546947225,305.045499537325,68.3268636681392,61.4401244766233,39.8991069434471,21.6814632113567,11.4691617897777,8.21846247482424,3.66951931378547,63.1730693446149,35.055581370018,60.6259766504506,74.9158489342356,80.4496159847369,45.2688207289071,56.6282610791701,54.3218754301479,171.107099783952,43.3901456747869,31.8663742749501,73.4365220621737,76.852109157502,164.804573701011,125.78250287845,94.1609286837335,135.676721491851,121.226492414527,51.8849394933413,14.6057054895715,14.7615549020297,31.6963362030877,45.6385559207014,43.221007793208,44.3047503089341,139.789564666127,81.2588758304752,43.4524707498253,105.881667845583,93.5772314393071,70.8845115425484,63.451996259691,56.8724584141477,37.8106309453064,115.011527619162,114.899257412495,168.059929791871,190.541301092798,62.153971201661,113.564525848328,63.5896076958821,93.5717163194634,88.0565753753256,47.0784767945783,87.6792326212596,99.0090417172689,103.383711499254,103.682231937318,104.58218157852,47.7770790217476,39.1289710288901,92.6896708799841,95.9200371689965,88.0995342533164,205.226075705107,382.681432100268,57.4440452188966,70.3380938708108,64.1491132121715,170.533637689071,153.503635961371,70.4322095485986,58.4657373211242,74.4567217154117,441.564682807549,266.611161921872,292.927658919656,89.6826756565318,80.6921016573253,88.5552729946492,366.288094689812,340.471379069166,305.902092049174,107.244805112415,90.8331323498277,89.4717339961443,27.6400605666122,36.1987772911503,152.468721057083,217.687240876291,229.83031079322,240.707623470466,222.223534767103,201.612099193801,291.141282933122,24.8828270963964,28.5764605063156,22.9670723431721,87.4637636813186,32.0816193535795,53.5091003383956,56.8853362522665,30.9582188646036,29.1363845296363,32.8590889259609,197.423928034255,13.4647699496529,164.91921650102,34.523580026461,69.1136635768561,63.18864624816,73.8540938707851,110.88615082897,136.096918410039,119.395169415703,135.778796147797,180.460552597774,113.398561813134,165.410297326835,112.975933980507,100.651551057786,235.395760797284,256.572215846482,121.59755827929,62.7831252411022,44.3928020935122,51.2093015104451,357.999628177526,309.72790810821,125.0260803523,285.071885115333,300.465662363138,373.395116073529,263.642052485106,105.200062857377,149.412771702722,141.777467481292,211.28362331002,31.4891471969743,48.0495398265958,45.0155324513373,52.1438669711574,107.905887654006,82.5052358634433,113.191683268152,165.311453902231,29.9639510176651,29.6896545863476,35.1902248327898,47.1270824719286,41.1509928853885,48.058798980059,52.4744447840256,41.2000932314281,34.4084461783485,34.2272716462571,48.5919583966463,40.3895256444229,54.1755198556332,56.1793631758366,62.2638654589103,67.2933672576121,63.5580505095998,83.4796861653964,87.7254022576755,175.615074920223,117.495732838225,206.194334883344,348.839087475817,443.863161823309,342.059079623457,516.560505808671,258.656636733876,87.9834435842882,141.749657900049,37.8164310328868,21.9686898051291,26.0105072483691,20.4899263502128,31.6643133658648,37.5818894097831,55.7361084509798,100.600161047436,109.689503846191,102.042094772909,127.332142106337,100.991397127704,99.7689543606186,85.8068058002536,149.953378760538,29.3985246477277,31.8753350181143,41.7018621990398,41.7485222082894,55.8583163042762,96.2964807094074,96.5621921887409,157.057197450297,133.448918665169,207.800824044312,235.383385907196,18.8534969459186,28.6976132865276,33.7293168577281,48.6864291332407,53.782506624789,79.1886399040216,74.2256034623091,152.569248395308,88.1342136333742,97.7623804386011,191.280447101611,188.470754561195,183.877423145497,166.839594575378,258.107283929401,138.564892624954,24.633883530163,24.93364139563,25.292017780503,26.7546883048892,48.7443209155684,86.885928923395,149.082106963358,79.7633829177326,96.5586046868659,86.5839393810155,131.582241716738,92.7318352619859,145.806251050164,55.7927750575307,21.7562273527484,89.0093334164456,102.372532879056,431.238884707209,337.452445698953,31.1476396215683,528.926592493161,45.433183595941,38.2629969410706,63.1190555357101,48.032728388463,64.3888168098119,59.162994934866,58.2927410411848,71.6026851882714,74.7093900318929,219.783780432516,71.2539227745508,73.5410943145764,104.573427904996,79.5155992727621,136.727492490162,39.330463057107,37.4881210636291,46.7740597794627,62.8993031836046,59.0275484052341,103.371317267288,78.1597518376637,76.6469363527151,103.027983087076,141.260935490498,135.107561655125,115.06858674478,29.3499583271036,40.2305506564366,46.0824625317923,44.6897388778529,57.4347592678667,70.9206278795141,183.287899366989,81.6657544061712,134.937029140253,127.465414075768,113.771514529621,106.405057192602,50.3612923150101,89.6486303463555,79.1159136771195,118.924181344979,431.670103080467,58.7795829944613,55.1052937461804,36.6685164192029,74.0288036028436,49.4833104350111,67.0320047495111,93.6581149266143,80.0522307291324,103.511780379513,63.9629314070126,24.9905434929097,22.7717803182071,28.2973992953119,31.5723326981848,43.6725127492355,51.922773358156,82.4054953581599,72.5063959295762,104.988128366352,172.732329038165,425.588168706564,48.2938443722052,53.2776339271854,56.7797469964619,69.4879850310193,69.7788798276914,111.489376713466,76.6903826730866,61.1329978001894,171.041557544812,234.168395087645,70.1544687794556,36.8959891828099,37.2840774508323,34.8187805580491,31.3296717418093,42.9151726327532,54.9293204306258,39.4331037556121,40.0836806294146,68.8909532161199,48.1949164954098,56.6230287097962,57.0536220927154,88.7095687558108,406.981038589304,14.6510729226883,12.829081495155,25.8542309200681,114.175050073025,73.9468953277657,67.7661009788881,60.2375145212175,158.99835697921,149.659238293523,176.764890818756,167.285489924304,211.894973829767,320.618619252661,330.107133159299,282.834427597127,308.470024208591,299.527132338559,312.727228298099,29.0604573235695,26.3356416444681,40.6345981694839,39.3832881650636,52.1936774943676,73.7212468884557,61.5623436010474,69.6398493467462,64.8256803375467,58.1203587056734,59.8211147740966,64.321582412652,57.2149610640982,55.3177316778071,53.3001151908091,61.4418861755165,56.6674353870343,56.1365831549382,56.455768410053,56.3771864114742,65.8308964579998,56.25983055251,52.6943979783579,60.609455735681,58.2537064770897,58.6379232689318,61.8296548309971,39.9865961385521,50.5191303506606,58.3587962524048,63.2324646601848,60.9742745904738,56.4738839574171,62.2846101567583,58.0648899053236,87.933323434157,69.2437560998409,126.129308726351,159.725757277484,168.31125278819,138.193230029771 | |phase1_expression=94.007373250514,202.05676102319,248.429584706687,244.693546947225,305.045499537325,68.3268636681392,61.4401244766233,39.8991069434471,21.6814632113567,11.4691617897777,8.21846247482424,3.66951931378547,63.1730693446149,35.055581370018,60.6259766504506,74.9158489342356,80.4496159847369,45.2688207289071,56.6282610791701,54.3218754301479,171.107099783952,43.3901456747869,31.8663742749501,73.4365220621737,76.852109157502,164.804573701011,125.78250287845,94.1609286837335,135.676721491851,121.226492414527,51.8849394933413,14.6057054895715,14.7615549020297,31.6963362030877,45.6385559207014,43.221007793208,44.3047503089341,139.789564666127,81.2588758304752,43.4524707498253,105.881667845583,93.5772314393071,70.8845115425484,63.451996259691,56.8724584141477,37.8106309453064,115.011527619162,114.899257412495,168.059929791871,190.541301092798,62.153971201661,113.564525848328,63.5896076958821,93.5717163194634,88.0565753753256,47.0784767945783,87.6792326212596,99.0090417172689,103.383711499254,103.682231937318,104.58218157852,47.7770790217476,39.1289710288901,92.6896708799841,95.9200371689965,88.0995342533164,205.226075705107,382.681432100268,57.4440452188966,70.3380938708108,64.1491132121715,170.533637689071,153.503635961371,70.4322095485986,58.4657373211242,74.4567217154117,441.564682807549,266.611161921872,292.927658919656,89.6826756565318,80.6921016573253,88.5552729946492,366.288094689812,340.471379069166,305.902092049174,107.244805112415,90.8331323498277,89.4717339961443,27.6400605666122,36.1987772911503,152.468721057083,217.687240876291,229.83031079322,240.707623470466,222.223534767103,201.612099193801,291.141282933122,24.8828270963964,28.5764605063156,22.9670723431721,87.4637636813186,32.0816193535795,53.5091003383956,56.8853362522665,30.9582188646036,29.1363845296363,32.8590889259609,197.423928034255,13.4647699496529,164.91921650102,34.523580026461,69.1136635768561,63.18864624816,73.8540938707851,110.88615082897,136.096918410039,119.395169415703,135.778796147797,180.460552597774,113.398561813134,165.410297326835,112.975933980507,100.651551057786,235.395760797284,256.572215846482,121.59755827929,62.7831252411022,44.3928020935122,51.2093015104451,357.999628177526,309.72790810821,125.0260803523,285.071885115333,300.465662363138,373.395116073529,263.642052485106,105.200062857377,149.412771702722,141.777467481292,211.28362331002,31.4891471969743,48.0495398265958,45.0155324513373,52.1438669711574,107.905887654006,82.5052358634433,113.191683268152,165.311453902231,29.9639510176651,29.6896545863476,35.1902248327898,47.1270824719286,41.1509928853885,48.058798980059,52.4744447840256,41.2000932314281,34.4084461783485,34.2272716462571,48.5919583966463,40.3895256444229,54.1755198556332,56.1793631758366,62.2638654589103,67.2933672576121,63.5580505095998,83.4796861653964,87.7254022576755,175.615074920223,117.495732838225,206.194334883344,348.839087475817,443.863161823309,342.059079623457,516.560505808671,258.656636733876,87.9834435842882,141.749657900049,37.8164310328868,21.9686898051291,26.0105072483691,20.4899263502128,31.6643133658648,37.5818894097831,55.7361084509798,100.600161047436,109.689503846191,102.042094772909,127.332142106337,100.991397127704,99.7689543606186,85.8068058002536,149.953378760538,29.3985246477277,31.8753350181143,41.7018621990398,41.7485222082894,55.8583163042762,96.2964807094074,96.5621921887409,157.057197450297,133.448918665169,207.800824044312,235.383385907196,18.8534969459186,28.6976132865276,33.7293168577281,48.6864291332407,53.782506624789,79.1886399040216,74.2256034623091,152.569248395308,88.1342136333742,97.7623804386011,191.280447101611,188.470754561195,183.877423145497,166.839594575378,258.107283929401,138.564892624954,24.633883530163,24.93364139563,25.292017780503,26.7546883048892,48.7443209155684,86.885928923395,149.082106963358,79.7633829177326,96.5586046868659,86.5839393810155,131.582241716738,92.7318352619859,145.806251050164,55.7927750575307,21.7562273527484,89.0093334164456,102.372532879056,431.238884707209,337.452445698953,31.1476396215683,528.926592493161,45.433183595941,38.2629969410706,63.1190555357101,48.032728388463,64.3888168098119,59.162994934866,58.2927410411848,71.6026851882714,74.7093900318929,219.783780432516,71.2539227745508,73.5410943145764,104.573427904996,79.5155992727621,136.727492490162,39.330463057107,37.4881210636291,46.7740597794627,62.8993031836046,59.0275484052341,103.371317267288,78.1597518376637,76.6469363527151,103.027983087076,141.260935490498,135.107561655125,115.06858674478,29.3499583271036,40.2305506564366,46.0824625317923,44.6897388778529,57.4347592678667,70.9206278795141,183.287899366989,81.6657544061712,134.937029140253,127.465414075768,113.771514529621,106.405057192602,50.3612923150101,89.6486303463555,79.1159136771195,118.924181344979,431.670103080467,58.7795829944613,55.1052937461804,36.6685164192029,74.0288036028436,49.4833104350111,67.0320047495111,93.6581149266143,80.0522307291324,103.511780379513,63.9629314070126,24.9905434929097,22.7717803182071,28.2973992953119,31.5723326981848,43.6725127492355,51.922773358156,82.4054953581599,72.5063959295762,104.988128366352,172.732329038165,425.588168706564,48.2938443722052,53.2776339271854,56.7797469964619,69.4879850310193,69.7788798276914,111.489376713466,76.6903826730866,61.1329978001894,171.041557544812,234.168395087645,70.1544687794556,36.8959891828099,37.2840774508323,34.8187805580491,31.3296717418093,42.9151726327532,54.9293204306258,39.4331037556121,40.0836806294146,68.8909532161199,48.1949164954098,56.6230287097962,57.0536220927154,88.7095687558108,406.981038589304,14.6510729226883,12.829081495155,25.8542309200681,114.175050073025,73.9468953277657,67.7661009788881,60.2375145212175,158.99835697921,149.659238293523,176.764890818756,167.285489924304,211.894973829767,320.618619252661,330.107133159299,282.834427597127,308.470024208591,299.527132338559,312.727228298099,29.0604573235695,26.3356416444681,40.6345981694839,39.3832881650636,52.1936774943676,73.7212468884557,61.5623436010474,69.6398493467462,64.8256803375467,58.1203587056734,59.8211147740966,64.321582412652,57.2149610640982,55.3177316778071,53.3001151908091,61.4418861755165,56.6674353870343,56.1365831549382,56.455768410053,56.3771864114742,65.8308964579998,56.25983055251,52.6943979783579,60.609455735681,58.2537064770897,58.6379232689318,61.8296548309971,39.9865961385521,50.5191303506606,58.3587962524048,63.2324646601848,60.9742745904738,56.4738839574171,62.2846101567583,58.0648899053236,87.933323434157,69.2437560998409,126.129308726351,159.725757277484,168.31125278819,138.193230029771 | ||
|short_description=p1@Pink1 | |||
}} | }} |
Latest revision as of 14:09, 26 September 2015
Short description: | p1@Pink1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pink1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1132 |
Association with transcript: | 0bp_to_ENSMUST00000105817, NM_026880, uc008vku.1, uc008vkv.1_5end |
EntrezGene: | Pink1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 4.44e-13 | 122 |
tube | 1.62e-11 | 114 |
regional part of nervous system | 5.65e-11 | 54 |
central nervous system | 1.88e-10 | 73 |
neural tube | 5.05e-10 | 52 |
neural rod | 5.05e-10 | 52 |
future spinal cord | 5.05e-10 | 52 |
neural keel | 5.05e-10 | 52 |
ectoderm-derived structure | 7.13e-10 | 95 |
ectoderm | 7.13e-10 | 95 |
presumptive ectoderm | 7.13e-10 | 95 |
structure with developmental contribution from neural crest | 2.38e-09 | 92 |
nervous system | 2.57e-09 | 75 |
brain | 4.16e-09 | 47 |
future brain | 4.16e-09 | 47 |
adult organism | 4.88e-09 | 51 |
regional part of brain | 1.05e-08 | 46 |
gray matter | 3.50e-08 | 34 |
ecto-epithelium | 4.51e-08 | 73 |
neurectoderm | 6.89e-08 | 64 |
neural plate | 6.89e-08 | 64 |
presumptive neural plate | 6.89e-08 | 64 |
brain grey matter | 1.72e-07 | 29 |
regional part of telencephalon | 1.72e-07 | 29 |
telencephalon | 1.72e-07 | 29 |