FFCP PHASE1:Mm9::chr10:92623532..92623560,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:92623532..92623560,+ to FFCP PHASE1:Mm9::chr10:92623532..92623560,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=237459 | |EntrezGene=237459 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8K0D0,Q8C5H7 | |UniProt=Q8K0D0,Q8C5H7 | ||
|association_with_transcript=-60bp_to_ENSMUST00000069965,NM_146239,uc007guk.2,uc007gul.2_5end | |||
|cluster_id=chr10:92623532..92623560,+ | |||
|description=CAGE_peak_2_at_Cdk17_5end | |||
|id=chr10:92623532..92623560,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.29e-12!52;UBERON:0005068!1.29e-12!52;UBERON:0006241!1.29e-12!52;UBERON:0007135!1.29e-12!52;UBERON:0000477!3.23e-12!154;UBERON:0001017!4.67e-11!73;UBERON:0005743!4.67e-11!73;UBERON:0002020!7.85e-11!34;UBERON:0000955!1.07e-10!50;UBERON:0006238!1.07e-10!50;UBERON:0003080!1.82e-10!40;UBERON:0000073!2.00e-10!75;UBERON:0001016!2.00e-10!75;UBERON:0007811!2.67e-10!86;UBERON:0000153!3.19e-10!94;UBERON:0002791!3.32e-10!29;UBERON:0003528!3.32e-10!29;UBERON:0001893!3.32e-10!29;UBERON:0002616!4.00e-10!49;UBERON:0002780!6.19e-10!39;UBERON:0001890!6.19e-10!39;UBERON:0006240!6.19e-10!39;UBERON:0000956!1.87e-08!21;UBERON:0001869!1.87e-08!21;UBERON:0000203!1.87e-08!21;UBERON:0000475!2.92e-08!200;UBERON:0000025!1.10e-07!114;UBERON:0004111!3.85e-07!122;UBERON:0003056!5.78e-07!49;UBERON:0002619!5.86e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.29e-12,52;UBERON:0005068,1.29e-12,52;UBERON:0006241,1.29e-12,52;UBERON:0007135,1.29e-12,52;UBERON:0000955,4.72e-12,47;UBERON:0006238,4.72e-12,47;UBERON:0002616,1.92e-11,46;UBERON:0001017,4.67e-11,73;UBERON:0000073,6.26e-11,54;UBERON:0002020,7.85e-11,34;UBERON:0003080,1.82e-10,40;UBERON:0001016,2.00e-10,75;UBERON:0003528,3.32e-10,29;UBERON:0002791,3.32e-10,29;UBERON:0001893,3.32e-10,29;UBERON:0002780,6.19e-10,39;UBERON:0001890,6.19e-10,39;UBERON:0006240,6.19e-10,39;UBERON:0002346,1.22e-08,64;UBERON:0003075,1.22e-08,64;UBERON:0007284,1.22e-08,64;UBERON:0000956,1.87e-08,21;UBERON:0001869,1.87e-08,21;UBERON:0000203,1.87e-08,21;UBERON:0000025,1.10e-07,114;UBERON:0004111,3.85e-07,122;UBERON:0003056,5.78e-07,49;UBERON:0002619,5.86e-07,17 | |||
|phase1_expression=8.48788889655408,4.18770489167233,5.91499011206397,2.41971369045464,7.01254021924886,4.70061961353291,3.73780224952841,13.4288256379239,45.0523910885334,21.0658073689794,13.1837835533639,5.34473465268754,14.7232627740837,11.1023911072127,15.6561588053361,18.8301998672538,24.4846657344851,17.6658812600613,16.1795031654772,18.6731446791133,8.67441559540912,13.2056965097177,8.61959304158487,3.35984087866154,3.89995777814189,2.8711598205751,4.73838195774982,2.58565479223067,1.71021077510736,2.01624103807945,4.21287970245079,12.065582795733,9.22597181376855,15.8481681015439,1.73310971850765,1.66234645358492,1.22501613757421,21.7636447983192,10.1573594788094,12.5645698553712,25.2939539853336,19.8083190637949,11.6522484727477,7.30201544258348,6.69087746048796,6.42413632565885,3.12956537739216,16.3518867285335,10.1055644057857,13.026803237977,7.8392396110203,12.9377307928474,16.2749127876004,27.5637613964311,27.2235977305396,5.40244815675489,7.16333599846892,5.15672092277442,24.4802917640113,24.8625760257855,27.8885817542719,4.74382344896785,1.77858959222228,1.7997994345628,1.97773272513395,4.2628806896766,6.2916023208865,8.83702102239575,16.3829587447395,23.2210213930508,19.7705463670299,12.5686433137674,12.1477697523387,20.5784542681123,19.6483215587385,21.1420320920305,5.50579404996943,14.1732945274558,7.98753972932466,23.6076455037047,20.1272815925301,17.1901412283731,8.93385596804419,15.757353080887,18.1829914854404,18.5616008848411,16.7998583342941,29.8239113320481,11.1317504199781,7.78387069099891,18.5513272769074,12.9063581547208,6.79971333707751,4.85732872474035,5.84798775702902,4.03224198387602,6.74133216632409,6.64678258054425,9.87186817490901,8.83348936275851,7.60554466794075,10.2661181931454,7.64415719119937,21.3320010945999,19.4841936910093,16.7217511213565,21.7375511356357,5.709193985953,11.3932668804756,8.90652834388949,8.15381035800839,9.13396434936424,8.07154240396205,7.68685466818375,9.64227398512779,6.28332956648377,6.92145909656247,11.5679485535929,15.0383793831479,9.70601099684455,15.4589062922275,13.5765070877862,3.72783522436244,36.8903804234549,34.1398132105932,8.43008282188352,15.8155964347815,7.7987355029143,12.1987417990142,27.7112682898922,26.0775343606617,31.7905510845547,34.2433910778785,24.5486839037117,25.1423533917068,18.9822277789276,9.47106083807942,12.067476149179,5.81262344397452,6.94458124425364,10.0192741081282,11.7250073261071,11.343914177737,10.2479276128286,6.53150391852747,10.5053250633577,8.24575176125614,8.01980449290949,7.54487975264948,14.7502742530899,12.8444320639683,18.4124415239163,11.9560317167007,15.6713474934975,12.7584924572925,14.7285357445685,9.12877143507205,9.26452465612975,10.2298859782413,13.6703009873431,12.4298811789981,10.6236616261999,16.5721314909647,13.9702604540657,13.1127045954272,14.4171045745253,11.8040296615832,9.45799273174073,9.54447129498187,13.4617320544858,8.91756905004413,13.5965988305559,12.5143565715899,9.39444931322602,27.1274033647724,20.3751132510983,4.29544417878937,6.61126416658861,11.5175655289026,16.0243303583703,11.9846739029547,13.5127961497639,9.33987784148455,10.4624094361908,9.01605216934572,8.07024878147653,9.0480675168097,8.35617182572834,11.8928093142663,7.19055526923377,4.97117514711797,5.17767310461355,7.58671603812327,8.68288695833939,10.1436962105772,8.75700709734851,9.30971938404604,7.85521182771568,7.77809406628365,5.75679577120448,5.96595165797224,4.19550357334122,8.59712618552732,20.8556382145118,21.8180484575655,23.6105218004096,26.3718157805054,20.7412357387078,14.0044218479781,21.5772103088108,14.2678999562031,9.06052663520669,35.9420516318386,12.6527922207291,11.5453939052387,8.5876818502018,7.17589654087649,13.9908621195376,21.2466168691595,8.90609635321278,13.0371981153621,11.3729207469376,12.2038929110021,12.8979818230198,13.8065311713888,14.0496226457615,13.24135210492,14.6166695168191,11.4807433433391,15.8947415274266,14.3328534948693,18.0811323226889,3.01582567878545,8.70249094109935,11.3105782794378,9.10591262805617,22.4770825982909,15.589154316763,3.60656879828686,8.33154059774431,10.4117712407365,11.3227235846025,12.4945570685023,12.9043150894378,16.932699230262,18.3999745012741,10.9298889452221,14.028281179743,14.6256477840214,38.8798792870387,14.3359486060351,11.7523298420388,13.3567306669932,19.1365342648141,26.5490276679926,9.46844481004428,6.65111825322452,12.4479352638893,15.0603965369194,19.0609791725235,19.1236936944484,17.8131527443978,22.8158322166222,18.3301319602773,18.9753495434998,11.3449097573006,18.3837387107046,9.72329907769075,9.9606186512721,14.5749183821483,14.1872186913819,14.0911365905636,15.9612549984057,9.13394847343798,8.44818149029357,14.8282449604674,6.83638033970382,5.93590510589328,7.26589920131575,6.57410881716899,10.6241386162791,6.89391778929257,6.99554007911642,21.1384844291981,20.846247457338,19.8131393244694,15.5563402990558,19.7786879854926,20.3674399304327,21.9627046278262,30.0861821089124,18.1936888020755,27.7781947346892,6.68269432610579,9.96458379780576,10.775931757723,10.0444966964275,12.1271211688392,8.95286511359328,11.1937407499401,10.827602700019,11.5172614472973,6.73997861117323,6.83473244395618,6.20062232552609,10.9147078612105,7.77654905148359,11.8615224889869,7.36210993823067,7.43406952159424,7.98029222791127,5.59878854828985,5.97698263226552,9.66336483304024,5.18454011264158,35.0772343897278,9.12263468805739,10.681939545142,12.0826365369349,22.7363903497701,26.0272574763457,25.9622170963133,28.651768271868,23.1213170381258,23.5479032563949,29.3404198748206,27.4831223686102,33.3855090491943,40.2056543504597,11.5632495643758,5.77163478772568,4.93426211352116,2.85403847818933,18.5462010270903,10.8855835761686,16.4836461840539,16.0776284309299,22.5707446815914,25.413832917768,27.6195141904306,25.7802981047728,31.2772791865511,19.8673930733486,21.9064230243013,16.8755625057951,24.3173449741079,21.2976932222576,28.4768171463501,10.6900968011702,20.7492934168536,14.8538237006097,18.7192172142586,13.6248555708189,15.0751676929012,14.8905307627082,12.5681384915725,12.8367683836726,12.6348605881899,11.4065684950608,16.7877443833608,11.9861129561449,9.73182316554013,10.8553036326109,12.859929664643,12.051969898265,12.5390993301408,11.1263193216893,8.24313952752625,8.9146005620208,10.1161209510822,8.58370283810355,10.3195955808953,13.081203877731,14.2998687336933,13.9025259383307,13.41655528333,9.50628796921032,12.3451299764702,10.0839765405548,11.7220334026921,11.0492381655816,10.0708946770878,14.8538090455479,14.7388240983388,13.3341016813883,16.7599422157673,15.1117782334386,13.67666798541,17.1582198359112 | |phase1_expression=8.48788889655408,4.18770489167233,5.91499011206397,2.41971369045464,7.01254021924886,4.70061961353291,3.73780224952841,13.4288256379239,45.0523910885334,21.0658073689794,13.1837835533639,5.34473465268754,14.7232627740837,11.1023911072127,15.6561588053361,18.8301998672538,24.4846657344851,17.6658812600613,16.1795031654772,18.6731446791133,8.67441559540912,13.2056965097177,8.61959304158487,3.35984087866154,3.89995777814189,2.8711598205751,4.73838195774982,2.58565479223067,1.71021077510736,2.01624103807945,4.21287970245079,12.065582795733,9.22597181376855,15.8481681015439,1.73310971850765,1.66234645358492,1.22501613757421,21.7636447983192,10.1573594788094,12.5645698553712,25.2939539853336,19.8083190637949,11.6522484727477,7.30201544258348,6.69087746048796,6.42413632565885,3.12956537739216,16.3518867285335,10.1055644057857,13.026803237977,7.8392396110203,12.9377307928474,16.2749127876004,27.5637613964311,27.2235977305396,5.40244815675489,7.16333599846892,5.15672092277442,24.4802917640113,24.8625760257855,27.8885817542719,4.74382344896785,1.77858959222228,1.7997994345628,1.97773272513395,4.2628806896766,6.2916023208865,8.83702102239575,16.3829587447395,23.2210213930508,19.7705463670299,12.5686433137674,12.1477697523387,20.5784542681123,19.6483215587385,21.1420320920305,5.50579404996943,14.1732945274558,7.98753972932466,23.6076455037047,20.1272815925301,17.1901412283731,8.93385596804419,15.757353080887,18.1829914854404,18.5616008848411,16.7998583342941,29.8239113320481,11.1317504199781,7.78387069099891,18.5513272769074,12.9063581547208,6.79971333707751,4.85732872474035,5.84798775702902,4.03224198387602,6.74133216632409,6.64678258054425,9.87186817490901,8.83348936275851,7.60554466794075,10.2661181931454,7.64415719119937,21.3320010945999,19.4841936910093,16.7217511213565,21.7375511356357,5.709193985953,11.3932668804756,8.90652834388949,8.15381035800839,9.13396434936424,8.07154240396205,7.68685466818375,9.64227398512779,6.28332956648377,6.92145909656247,11.5679485535929,15.0383793831479,9.70601099684455,15.4589062922275,13.5765070877862,3.72783522436244,36.8903804234549,34.1398132105932,8.43008282188352,15.8155964347815,7.7987355029143,12.1987417990142,27.7112682898922,26.0775343606617,31.7905510845547,34.2433910778785,24.5486839037117,25.1423533917068,18.9822277789276,9.47106083807942,12.067476149179,5.81262344397452,6.94458124425364,10.0192741081282,11.7250073261071,11.343914177737,10.2479276128286,6.53150391852747,10.5053250633577,8.24575176125614,8.01980449290949,7.54487975264948,14.7502742530899,12.8444320639683,18.4124415239163,11.9560317167007,15.6713474934975,12.7584924572925,14.7285357445685,9.12877143507205,9.26452465612975,10.2298859782413,13.6703009873431,12.4298811789981,10.6236616261999,16.5721314909647,13.9702604540657,13.1127045954272,14.4171045745253,11.8040296615832,9.45799273174073,9.54447129498187,13.4617320544858,8.91756905004413,13.5965988305559,12.5143565715899,9.39444931322602,27.1274033647724,20.3751132510983,4.29544417878937,6.61126416658861,11.5175655289026,16.0243303583703,11.9846739029547,13.5127961497639,9.33987784148455,10.4624094361908,9.01605216934572,8.07024878147653,9.0480675168097,8.35617182572834,11.8928093142663,7.19055526923377,4.97117514711797,5.17767310461355,7.58671603812327,8.68288695833939,10.1436962105772,8.75700709734851,9.30971938404604,7.85521182771568,7.77809406628365,5.75679577120448,5.96595165797224,4.19550357334122,8.59712618552732,20.8556382145118,21.8180484575655,23.6105218004096,26.3718157805054,20.7412357387078,14.0044218479781,21.5772103088108,14.2678999562031,9.06052663520669,35.9420516318386,12.6527922207291,11.5453939052387,8.5876818502018,7.17589654087649,13.9908621195376,21.2466168691595,8.90609635321278,13.0371981153621,11.3729207469376,12.2038929110021,12.8979818230198,13.8065311713888,14.0496226457615,13.24135210492,14.6166695168191,11.4807433433391,15.8947415274266,14.3328534948693,18.0811323226889,3.01582567878545,8.70249094109935,11.3105782794378,9.10591262805617,22.4770825982909,15.589154316763,3.60656879828686,8.33154059774431,10.4117712407365,11.3227235846025,12.4945570685023,12.9043150894378,16.932699230262,18.3999745012741,10.9298889452221,14.028281179743,14.6256477840214,38.8798792870387,14.3359486060351,11.7523298420388,13.3567306669932,19.1365342648141,26.5490276679926,9.46844481004428,6.65111825322452,12.4479352638893,15.0603965369194,19.0609791725235,19.1236936944484,17.8131527443978,22.8158322166222,18.3301319602773,18.9753495434998,11.3449097573006,18.3837387107046,9.72329907769075,9.9606186512721,14.5749183821483,14.1872186913819,14.0911365905636,15.9612549984057,9.13394847343798,8.44818149029357,14.8282449604674,6.83638033970382,5.93590510589328,7.26589920131575,6.57410881716899,10.6241386162791,6.89391778929257,6.99554007911642,21.1384844291981,20.846247457338,19.8131393244694,15.5563402990558,19.7786879854926,20.3674399304327,21.9627046278262,30.0861821089124,18.1936888020755,27.7781947346892,6.68269432610579,9.96458379780576,10.775931757723,10.0444966964275,12.1271211688392,8.95286511359328,11.1937407499401,10.827602700019,11.5172614472973,6.73997861117323,6.83473244395618,6.20062232552609,10.9147078612105,7.77654905148359,11.8615224889869,7.36210993823067,7.43406952159424,7.98029222791127,5.59878854828985,5.97698263226552,9.66336483304024,5.18454011264158,35.0772343897278,9.12263468805739,10.681939545142,12.0826365369349,22.7363903497701,26.0272574763457,25.9622170963133,28.651768271868,23.1213170381258,23.5479032563949,29.3404198748206,27.4831223686102,33.3855090491943,40.2056543504597,11.5632495643758,5.77163478772568,4.93426211352116,2.85403847818933,18.5462010270903,10.8855835761686,16.4836461840539,16.0776284309299,22.5707446815914,25.413832917768,27.6195141904306,25.7802981047728,31.2772791865511,19.8673930733486,21.9064230243013,16.8755625057951,24.3173449741079,21.2976932222576,28.4768171463501,10.6900968011702,20.7492934168536,14.8538237006097,18.7192172142586,13.6248555708189,15.0751676929012,14.8905307627082,12.5681384915725,12.8367683836726,12.6348605881899,11.4065684950608,16.7877443833608,11.9861129561449,9.73182316554013,10.8553036326109,12.859929664643,12.051969898265,12.5390993301408,11.1263193216893,8.24313952752625,8.9146005620208,10.1161209510822,8.58370283810355,10.3195955808953,13.081203877731,14.2998687336933,13.9025259383307,13.41655528333,9.50628796921032,12.3451299764702,10.0839765405548,11.7220334026921,11.0492381655816,10.0708946770878,14.8538090455479,14.7388240983388,13.3341016813883,16.7599422157673,15.1117782334386,13.67666798541,17.1582198359112 | ||
|short_description=p2@Cdk17 | |||
}} | }} |
Latest revision as of 14:21, 26 September 2015
Short description: | p2@Cdk17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cdk17_5end |
Coexpression cluster: | NA |
Association with transcript: | -60bp_to_ENSMUST00000069965, NM_146239, uc007guk.2, uc007gul.2_5end |
EntrezGene: | Cdk17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.29e-12 | 52 |
neural rod | 1.29e-12 | 52 |
future spinal cord | 1.29e-12 | 52 |
neural keel | 1.29e-12 | 52 |
brain | 4.72e-12 | 47 |
future brain | 4.72e-12 | 47 |
regional part of brain | 1.92e-11 | 46 |
central nervous system | 4.67e-11 | 73 |
regional part of nervous system | 6.26e-11 | 54 |
gray matter | 7.85e-11 | 34 |
anterior neural tube | 1.82e-10 | 40 |
nervous system | 2.00e-10 | 75 |
brain grey matter | 3.32e-10 | 29 |
regional part of telencephalon | 3.32e-10 | 29 |
telencephalon | 3.32e-10 | 29 |
regional part of forebrain | 6.19e-10 | 39 |
forebrain | 6.19e-10 | 39 |
future forebrain | 6.19e-10 | 39 |
neurectoderm | 1.22e-08 | 64 |
neural plate | 1.22e-08 | 64 |
presumptive neural plate | 1.22e-08 | 64 |
cerebral cortex | 1.87e-08 | 21 |
cerebral hemisphere | 1.87e-08 | 21 |
pallium | 1.87e-08 | 21 |
tube | 1.10e-07 | 114 |
anatomical conduit | 3.85e-07 | 122 |
pre-chordal neural plate | 5.78e-07 | 49 |
regional part of cerebral cortex | 5.86e-07 | 17 |