FFCP PHASE1:Mm9::chr15:102289597..102289614,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66151 | |EntrezGene=66151 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9CQJ5 | |UniProt=Q9CQJ5 | ||
|association_with_transcript=0bp_to_ENSMUST00000023810,NM_001170911,NM_025385,uc007xvr.2,uc007xvs.2_5end | |association_with_transcript=0bp_to_ENSMUST00000023810,NM_001170911,NM_025385,uc007xvr.2,uc007xvs.2_5end | ||
|cluster_id=chr15:102289597..102289614,+ | |||
|description=CAGE_peak_3_at_Prr13_5end | |description=CAGE_peak_3_at_Prr13_5end | ||
|id=chr15:102289597..102289614,+ | |id=chr15:102289597..102289614,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.78e-09!50;CL:0000221!4.33e-07!44;CL:0000133!4.33e-07!44;CL:0002319!5.15e-07!43 | |ontology_enrichment_celltype=CL:0000055!3.78e-09!50;CL:0000221!4.33e-07!44;CL:0000133!4.33e-07!44;CL:0002319!5.15e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.31e-07,44;CL:0000133,4.31e-07,44;CL:0002319,5.12e-07,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!8.55e-16!50;UBERON:0006238!8.55e-16!50;UBERON:0002616!1.80e-15!49;UBERON:0000073!2.73e-15!75;UBERON:0001016!2.73e-15!75;UBERON:0001017!2.78e-15!73;UBERON:0005743!2.78e-15!73;UBERON:0004121!1.07e-14!102;UBERON:0000924!1.07e-14!102;UBERON:0006601!1.07e-14!102;UBERON:0001049!1.08e-13!52;UBERON:0005068!1.08e-13!52;UBERON:0006241!1.08e-13!52;UBERON:0007135!1.08e-13!52;UBERON:0000033!1.49e-13!63;UBERON:0004111!7.96e-13!122;UBERON:0002346!2.28e-12!71;UBERON:0003075!2.28e-12!71;UBERON:0007284!2.28e-12!71;UBERON:0000025!3.92e-12!114;UBERON:0000477!1.16e-11!154;UBERON:0003080!7.07e-11!40;UBERON:0002780!2.27e-10!39;UBERON:0001890!2.27e-10!39;UBERON:0006240!2.27e-10!39;UBERON:0007811!3.45e-10!86;UBERON:0000153!4.88e-10!94;UBERON:0002791!6.08e-10!29;UBERON:0003528!6.08e-10!29;UBERON:0001893!6.08e-10!29;UBERON:0002020!5.38e-09!34;UBERON:0003056!9.31e-09!49;UBERON:0000956!6.87e-08!21;UBERON:0001869!6.87e-08!21;UBERON:0000203!6.87e-08!21;UBERON:0000119!8.13e-07!183 | |ontology_enrichment_uberon=UBERON:0000955!8.55e-16!50;UBERON:0006238!8.55e-16!50;UBERON:0002616!1.80e-15!49;UBERON:0000073!2.73e-15!75;UBERON:0001016!2.73e-15!75;UBERON:0001017!2.78e-15!73;UBERON:0005743!2.78e-15!73;UBERON:0004121!1.07e-14!102;UBERON:0000924!1.07e-14!102;UBERON:0006601!1.07e-14!102;UBERON:0001049!1.08e-13!52;UBERON:0005068!1.08e-13!52;UBERON:0006241!1.08e-13!52;UBERON:0007135!1.08e-13!52;UBERON:0000033!1.49e-13!63;UBERON:0004111!7.96e-13!122;UBERON:0002346!2.28e-12!71;UBERON:0003075!2.28e-12!71;UBERON:0007284!2.28e-12!71;UBERON:0000025!3.92e-12!114;UBERON:0000477!1.16e-11!154;UBERON:0003080!7.07e-11!40;UBERON:0002780!2.27e-10!39;UBERON:0001890!2.27e-10!39;UBERON:0006240!2.27e-10!39;UBERON:0007811!3.45e-10!86;UBERON:0000153!4.88e-10!94;UBERON:0002791!6.08e-10!29;UBERON:0003528!6.08e-10!29;UBERON:0001893!6.08e-10!29;UBERON:0002020!5.38e-09!34;UBERON:0003056!9.31e-09!49;UBERON:0000956!6.87e-08!21;UBERON:0001869!6.87e-08!21;UBERON:0000203!6.87e-08!21;UBERON:0000119!8.13e-07!183 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,8.58e-16,92;UBERON:0001016,2.69e-15,75;UBERON:0001017,2.73e-15,73;UBERON:0000073,1.41e-14,54;UBERON:0000955,2.90e-14,47;UBERON:0006238,2.90e-14,47;UBERON:0002616,6.02e-14,46;UBERON:0001049,1.06e-13,52;UBERON:0005068,1.06e-13,52;UBERON:0006241,1.06e-13,52;UBERON:0007135,1.06e-13,52;UBERON:0004111,8.61e-13,122;UBERON:0004121,1.14e-12,95;UBERON:0000924,1.14e-12,95;UBERON:0006601,1.14e-12,95;UBERON:0000025,4.24e-12,114;UBERON:0003080,7.00e-11,40;UBERON:0002346,1.77e-10,64;UBERON:0003075,1.77e-10,64;UBERON:0007284,1.77e-10,64;UBERON:0002780,2.24e-10,39;UBERON:0001890,2.24e-10,39;UBERON:0006240,2.24e-10,39;UBERON:0003528,6.02e-10,29;UBERON:0002791,6.02e-10,29;UBERON:0001893,6.02e-10,29;UBERON:0010371,1.31e-09,73;UBERON:0002020,5.33e-09,34;UBERON:0003056,9.24e-09,49;UBERON:0000956,6.82e-08,21;UBERON:0001869,6.82e-08,21;UBERON:0000203,6.82e-08,21 | |||
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| ||
|short_description=p3@Prr13 | |short_description=p3@Prr13 | ||
}} | }} |
Latest revision as of 14:23, 26 September 2015
Short description: | p3@Prr13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Prr13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000023810, NM_001170911, NM_025385, uc007xvr.2, uc007xvs.2_5end |
EntrezGene: | Prr13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.31e-07 | 44 |
neurectodermal cell | 4.31e-07 | 44 |
neural cell | 5.12e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 8.58e-16 | 92 |
nervous system | 2.69e-15 | 75 |
central nervous system | 2.73e-15 | 73 |
regional part of nervous system | 1.41e-14 | 54 |
brain | 2.90e-14 | 47 |
future brain | 2.90e-14 | 47 |
regional part of brain | 6.02e-14 | 46 |
neural tube | 1.06e-13 | 52 |
neural rod | 1.06e-13 | 52 |
future spinal cord | 1.06e-13 | 52 |
neural keel | 1.06e-13 | 52 |
anatomical conduit | 8.61e-13 | 122 |
ectoderm-derived structure | 1.14e-12 | 95 |
ectoderm | 1.14e-12 | 95 |
presumptive ectoderm | 1.14e-12 | 95 |
tube | 4.24e-12 | 114 |
anterior neural tube | 7.00e-11 | 40 |
neurectoderm | 1.77e-10 | 64 |
neural plate | 1.77e-10 | 64 |
presumptive neural plate | 1.77e-10 | 64 |
regional part of forebrain | 2.24e-10 | 39 |
forebrain | 2.24e-10 | 39 |
future forebrain | 2.24e-10 | 39 |
brain grey matter | 6.02e-10 | 29 |
regional part of telencephalon | 6.02e-10 | 29 |
telencephalon | 6.02e-10 | 29 |
ecto-epithelium | 1.31e-09 | 73 |
gray matter | 5.33e-09 | 34 |
pre-chordal neural plate | 9.24e-09 | 49 |
cerebral cortex | 6.82e-08 | 21 |
cerebral hemisphere | 6.82e-08 | 21 |
pallium | 6.82e-08 | 21 |