FFCP PHASE1:Mm9::chr17:47832120..47832153,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=107971 | |EntrezGene=107971 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=208 | |||
|TSSclassifier=NA | |||
|UniProt=Q91WJ0 | |UniProt=Q91WJ0 | ||
|association_with_transcript=0bp_to_ENSMUST00000113296_5end | |association_with_transcript=0bp_to_ENSMUST00000113296_5end | ||
|cluster_id=chr17:47832120..47832153,+ | |||
|description=CAGE_peak_1_at_Frs3_5end | |description=CAGE_peak_1_at_Frs3_5end | ||
|id=chr17:47832120..47832153,+ | |id=chr17:47832120..47832153,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.02e-12!23;CL:0000337!1.02e-12!23;CL:0000393!1.69e-10!39;CL:0000211!1.69e-10!39;CL:0000055!2.08e-10!50;CL:0000540!4.20e-10!33;CL:0000047!4.20e-10!33;CL:0000031!4.20e-10!33;CL:0000404!4.20e-10!33;CL:0000221!4.41e-10!44;CL:0000133!4.41e-10!44;CL:0002319!5.47e-10!43;CL:0002321!6.21e-07!70;CL:0000220!6.21e-07!70 | |ontology_enrichment_celltype=CL:0000117!1.02e-12!23;CL:0000337!1.02e-12!23;CL:0000393!1.69e-10!39;CL:0000211!1.69e-10!39;CL:0000055!2.08e-10!50;CL:0000540!4.20e-10!33;CL:0000047!4.20e-10!33;CL:0000031!4.20e-10!33;CL:0000404!4.20e-10!33;CL:0000221!4.41e-10!44;CL:0000133!4.41e-10!44;CL:0002319!5.47e-10!43;CL:0002321!6.21e-07!70;CL:0000220!6.21e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.98e-13,23;CL:0000337,4.98e-13,23;CL:0000393,2.27e-10,39;CL:0000211,2.27e-10,39;CL:0000540,6.08e-10,33;CL:0000047,6.08e-10,33;CL:0000031,6.08e-10,33;CL:0000404,6.08e-10,33;CL:0000221,6.58e-10,44;CL:0000133,6.58e-10,44;CL:0002319,8.24e-10,43;CL:0002321,6.66e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.37e-18!73;UBERON:0005743!2.37e-18!73;UBERON:0000073!1.71e-17!75;UBERON:0001016!1.71e-17!75;UBERON:0000033!1.26e-15!63;UBERON:0004121!1.37e-15!102;UBERON:0000924!1.37e-15!102;UBERON:0006601!1.37e-15!102;UBERON:0001049!4.14e-15!52;UBERON:0005068!4.14e-15!52;UBERON:0006241!4.14e-15!52;UBERON:0007135!4.14e-15!52;UBERON:0002346!4.51e-15!71;UBERON:0003075!4.51e-15!71;UBERON:0007284!4.51e-15!71;UBERON:0000955!1.01e-13!50;UBERON:0006238!1.01e-13!50;UBERON:0002616!2.03e-13!49;UBERON:0003056!2.08e-11!49;UBERON:0002020!3.45e-10!34;UBERON:0003080!2.06e-09!40;UBERON:0002780!7.16e-09!39;UBERON:0001890!7.16e-09!39;UBERON:0006240!7.16e-09!39;UBERON:0000025!8.50e-08!114;UBERON:0002791!1.85e-07!29;UBERON:0003528!1.85e-07!29;UBERON:0001893!1.85e-07!29;UBERON:0003076!3.72e-07!12;UBERON:0003057!3.72e-07!12;UBERON:0004111!5.56e-07!122 | |ontology_enrichment_uberon=UBERON:0001017!2.37e-18!73;UBERON:0005743!2.37e-18!73;UBERON:0000073!1.71e-17!75;UBERON:0001016!1.71e-17!75;UBERON:0000033!1.26e-15!63;UBERON:0004121!1.37e-15!102;UBERON:0000924!1.37e-15!102;UBERON:0006601!1.37e-15!102;UBERON:0001049!4.14e-15!52;UBERON:0005068!4.14e-15!52;UBERON:0006241!4.14e-15!52;UBERON:0007135!4.14e-15!52;UBERON:0002346!4.51e-15!71;UBERON:0003075!4.51e-15!71;UBERON:0007284!4.51e-15!71;UBERON:0000955!1.01e-13!50;UBERON:0006238!1.01e-13!50;UBERON:0002616!2.03e-13!49;UBERON:0003056!2.08e-11!49;UBERON:0002020!3.45e-10!34;UBERON:0003080!2.06e-09!40;UBERON:0002780!7.16e-09!39;UBERON:0001890!7.16e-09!39;UBERON:0006240!7.16e-09!39;UBERON:0000025!8.50e-08!114;UBERON:0002791!1.85e-07!29;UBERON:0003528!1.85e-07!29;UBERON:0001893!1.85e-07!29;UBERON:0003076!3.72e-07!12;UBERON:0003057!3.72e-07!12;UBERON:0004111!5.56e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.08e-18,73;UBERON:0002346,1.76e-17,64;UBERON:0003075,1.76e-17,64;UBERON:0007284,1.76e-17,64;UBERON:0001016,2.61e-17,75;UBERON:0004121,3.89e-17,95;UBERON:0000924,3.89e-17,95;UBERON:0006601,3.89e-17,95;UBERON:0000073,1.22e-16,54;UBERON:0001049,2.70e-15,52;UBERON:0005068,2.70e-15,52;UBERON:0006241,2.70e-15,52;UBERON:0007135,2.70e-15,52;UBERON:0010371,2.55e-14,73;UBERON:0010314,2.36e-12,92;UBERON:0000955,4.90e-12,47;UBERON:0006238,4.90e-12,47;UBERON:0002616,9.82e-12,46;UBERON:0003056,1.62e-11,49;UBERON:0002020,2.00e-10,34;UBERON:0003080,1.81e-09,40;UBERON:0002780,6.47e-09,39;UBERON:0001890,6.47e-09,39;UBERON:0006240,6.47e-09,39;UBERON:0003528,1.27e-07,29;UBERON:0002791,1.27e-07,29;UBERON:0001893,1.27e-07,29;UBERON:0000025,2.57e-07,114;UBERON:0003076,2.60e-07,12;UBERON:0003057,2.60e-07,12 | |||
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| ||
|short_description=p1@Frs3 | |short_description=p1@Frs3 | ||
}} | }} |
Latest revision as of 14:36, 26 September 2015
Short description: | p1@Frs3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Frs3_5end |
Coexpression cluster: | MCL_coexpression_mm9:208 |
Association with transcript: | 0bp_to_ENSMUST00000113296_5end |
EntrezGene: | Frs3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.98e-13 | 23 |
neuroblast (sensu Vertebrata) | 4.98e-13 | 23 |
electrically responsive cell | 2.27e-10 | 39 |
electrically active cell | 2.27e-10 | 39 |
neuron | 6.08e-10 | 33 |
neuronal stem cell | 6.08e-10 | 33 |
neuroblast | 6.08e-10 | 33 |
electrically signaling cell | 6.08e-10 | 33 |
ectodermal cell | 6.58e-10 | 44 |
neurectodermal cell | 6.58e-10 | 44 |
neural cell | 8.24e-10 | 43 |
embryonic cell | 6.66e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.08e-18 | 73 |
neurectoderm | 1.76e-17 | 64 |
neural plate | 1.76e-17 | 64 |
presumptive neural plate | 1.76e-17 | 64 |
nervous system | 2.61e-17 | 75 |
ectoderm-derived structure | 3.89e-17 | 95 |
ectoderm | 3.89e-17 | 95 |
presumptive ectoderm | 3.89e-17 | 95 |
regional part of nervous system | 1.22e-16 | 54 |
neural tube | 2.70e-15 | 52 |
neural rod | 2.70e-15 | 52 |
future spinal cord | 2.70e-15 | 52 |
neural keel | 2.70e-15 | 52 |
ecto-epithelium | 2.55e-14 | 73 |
structure with developmental contribution from neural crest | 2.36e-12 | 92 |
brain | 4.90e-12 | 47 |
future brain | 4.90e-12 | 47 |
regional part of brain | 9.82e-12 | 46 |
pre-chordal neural plate | 1.62e-11 | 49 |
gray matter | 2.00e-10 | 34 |
anterior neural tube | 1.81e-09 | 40 |
regional part of forebrain | 6.47e-09 | 39 |
forebrain | 6.47e-09 | 39 |
future forebrain | 6.47e-09 | 39 |
brain grey matter | 1.27e-07 | 29 |
regional part of telencephalon | 1.27e-07 | 29 |
telencephalon | 1.27e-07 | 29 |
tube | 2.57e-07 | 114 |
posterior neural tube | 2.60e-07 | 12 |
chordal neural plate | 2.60e-07 | 12 |