FFCP PHASE1:Mm9::chr12:4082575..4082594,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=217378 | |EntrezGene=217378 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=208 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CFP6 | |UniProt=Q8CFP6 | ||
|association_with_transcript=1bp_to_NM_153082,uc007mxi.2,uc007mxj.2_5end | |association_with_transcript=1bp_to_NM_153082,uc007mxi.2,uc007mxj.2_5end | ||
|cluster_id=chr12:4082575..4082594,+ | |||
|description=CAGE_peak_2_at_Dnajc27_5end | |description=CAGE_peak_2_at_Dnajc27_5end | ||
|id=chr12:4082575..4082594,+ | |id=chr12:4082575..4082594,+ | ||
|ontology_enrichment_celltype=CL:0000117!4.17e-11!23;CL:0000337!4.17e-11!23;CL:0000540!8.47e-08!33;CL:0000047!8.47e-08!33;CL:0000031!8.47e-08!33;CL:0000404!8.47e-08!33 | |ontology_enrichment_celltype=CL:0000117!4.17e-11!23;CL:0000337!4.17e-11!23;CL:0000540!8.47e-08!33;CL:0000047!8.47e-08!33;CL:0000031!8.47e-08!33;CL:0000404!8.47e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.52e-12,23;CL:0000337,4.52e-12,23;CL:0000540,1.13e-07,33;CL:0000047,1.13e-07,33;CL:0000031,1.13e-07,33;CL:0000404,1.13e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.92e-17!73;UBERON:0005743!4.92e-17!73;UBERON:0001049!5.10e-16!52;UBERON:0005068!5.10e-16!52;UBERON:0006241!5.10e-16!52;UBERON:0007135!5.10e-16!52;UBERON:0000033!8.25e-16!63;UBERON:0000073!8.89e-16!75;UBERON:0001016!8.89e-16!75;UBERON:0000955!6.47e-15!50;UBERON:0006238!6.47e-15!50;UBERON:0002020!1.19e-14!34;UBERON:0002616!2.49e-14!49;UBERON:0004121!8.90e-13!102;UBERON:0000924!8.90e-13!102;UBERON:0006601!8.90e-13!102;UBERON:0002346!1.06e-12!71;UBERON:0003075!1.06e-12!71;UBERON:0007284!1.06e-12!71;UBERON:0003056!2.54e-12!49;UBERON:0002791!8.80e-12!29;UBERON:0003528!8.80e-12!29;UBERON:0001893!8.80e-12!29;UBERON:0003080!1.54e-11!40;UBERON:0007811!3.43e-11!86;UBERON:0002780!5.75e-11!39;UBERON:0001890!5.75e-11!39;UBERON:0006240!5.75e-11!39;UBERON:0000153!2.59e-09!94;UBERON:0000956!3.14e-08!21;UBERON:0001869!3.14e-08!21;UBERON:0000203!3.14e-08!21;UBERON:0002619!3.78e-07!17 | |ontology_enrichment_uberon=UBERON:0001017!4.92e-17!73;UBERON:0005743!4.92e-17!73;UBERON:0001049!5.10e-16!52;UBERON:0005068!5.10e-16!52;UBERON:0006241!5.10e-16!52;UBERON:0007135!5.10e-16!52;UBERON:0000033!8.25e-16!63;UBERON:0000073!8.89e-16!75;UBERON:0001016!8.89e-16!75;UBERON:0000955!6.47e-15!50;UBERON:0006238!6.47e-15!50;UBERON:0002020!1.19e-14!34;UBERON:0002616!2.49e-14!49;UBERON:0004121!8.90e-13!102;UBERON:0000924!8.90e-13!102;UBERON:0006601!8.90e-13!102;UBERON:0002346!1.06e-12!71;UBERON:0003075!1.06e-12!71;UBERON:0007284!1.06e-12!71;UBERON:0003056!2.54e-12!49;UBERON:0002791!8.80e-12!29;UBERON:0003528!8.80e-12!29;UBERON:0001893!8.80e-12!29;UBERON:0003080!1.54e-11!40;UBERON:0007811!3.43e-11!86;UBERON:0002780!5.75e-11!39;UBERON:0001890!5.75e-11!39;UBERON:0006240!5.75e-11!39;UBERON:0000153!2.59e-09!94;UBERON:0000956!3.14e-08!21;UBERON:0001869!3.14e-08!21;UBERON:0000203!3.14e-08!21;UBERON:0002619!3.78e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.10e-18,54;UBERON:0001017,6.73e-17,73;UBERON:0001049,7.83e-17,52;UBERON:0005068,7.83e-17,52;UBERON:0006241,7.83e-17,52;UBERON:0007135,7.83e-17,52;UBERON:0002020,4.31e-16,34;UBERON:0001016,1.10e-15,75;UBERON:0002346,2.63e-15,64;UBERON:0003075,2.63e-15,64;UBERON:0007284,2.63e-15,64;UBERON:0004121,1.81e-14,95;UBERON:0000924,1.81e-14,95;UBERON:0006601,1.81e-14,95;UBERON:0000955,9.86e-14,47;UBERON:0006238,9.86e-14,47;UBERON:0010314,1.37e-13,92;UBERON:0010371,1.42e-13,73;UBERON:0002616,4.04e-13,46;UBERON:0003528,6.29e-13,29;UBERON:0002791,6.29e-13,29;UBERON:0001893,6.29e-13,29;UBERON:0003056,9.78e-13,49;UBERON:0003080,2.77e-12,40;UBERON:0002780,1.17e-11,39;UBERON:0001890,1.17e-11,39;UBERON:0006240,1.17e-11,39;UBERON:0000956,5.18e-09,21;UBERON:0001869,5.18e-09,21;UBERON:0000203,5.18e-09,21;UBERON:0002619,7.97e-08,17;UBERON:0002021,4.73e-07,10;UBERON:0000411,4.73e-07,10;UBERON:0001950,4.73e-07,10 | |||
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| ||
|short_description=p2@Dnajc27 | |short_description=p2@Dnajc27 | ||
}} | }} |
Latest revision as of 14:45, 26 September 2015
Short description: | p2@Dnajc27 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dnajc27_5end |
Coexpression cluster: | MCL_coexpression_mm9:208 |
Association with transcript: | 1bp_to_NM_153082, uc007mxi.2, uc007mxj.2_5end |
EntrezGene: | Dnajc27 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.52e-12 | 23 |
neuroblast (sensu Vertebrata) | 4.52e-12 | 23 |
neuron | 1.13e-07 | 33 |
neuronal stem cell | 1.13e-07 | 33 |
neuroblast | 1.13e-07 | 33 |
electrically signaling cell | 1.13e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 4.10e-18 | 54 |
central nervous system | 6.73e-17 | 73 |
neural tube | 7.83e-17 | 52 |
neural rod | 7.83e-17 | 52 |
future spinal cord | 7.83e-17 | 52 |
neural keel | 7.83e-17 | 52 |
gray matter | 4.31e-16 | 34 |
nervous system | 1.10e-15 | 75 |
neurectoderm | 2.63e-15 | 64 |
neural plate | 2.63e-15 | 64 |
presumptive neural plate | 2.63e-15 | 64 |
ectoderm-derived structure | 1.81e-14 | 95 |
ectoderm | 1.81e-14 | 95 |
presumptive ectoderm | 1.81e-14 | 95 |
brain | 9.86e-14 | 47 |
future brain | 9.86e-14 | 47 |
structure with developmental contribution from neural crest | 1.37e-13 | 92 |
ecto-epithelium | 1.42e-13 | 73 |
regional part of brain | 4.04e-13 | 46 |
brain grey matter | 6.29e-13 | 29 |
regional part of telencephalon | 6.29e-13 | 29 |
telencephalon | 6.29e-13 | 29 |
pre-chordal neural plate | 9.78e-13 | 49 |
anterior neural tube | 2.77e-12 | 40 |
regional part of forebrain | 1.17e-11 | 39 |
forebrain | 1.17e-11 | 39 |
future forebrain | 1.17e-11 | 39 |
cerebral cortex | 5.18e-09 | 21 |
cerebral hemisphere | 5.18e-09 | 21 |
pallium | 5.18e-09 | 21 |
regional part of cerebral cortex | 7.97e-08 | 17 |
occipital lobe | 4.73e-07 | 10 |
visual cortex | 4.73e-07 | 10 |
neocortex | 4.73e-07 | 10 |