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FFCP PHASE1:Mm9::chr4:138936516..138936571,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=69116
|EntrezGene=69116
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=A2AN08
|UniProt=A2AN08
|association_with_transcript=-2bp_to_ENSMUST00000064355,ENSMUST00000097822,ENSMUST00000165860,NM_001160319,uc008vmj.2,uc008vmm.2_5end
|association_with_transcript=-2bp_to_ENSMUST00000064355,ENSMUST00000097822,ENSMUST00000165860,NM_001160319,uc008vmj.2,uc008vmm.2_5end
|cluster_id=chr4:138936516..138936571,+
|description=CAGE_peak_3_at_Ubr4_5end
|description=CAGE_peak_3_at_Ubr4_5end
|id=chr4:138936516..138936571,+
|id=chr4:138936516..138936571,+
|ontology_enrichment_celltype=CL:0000117!1.62e-11!23;CL:0000337!1.62e-11!23;CL:0000540!5.43e-09!33;CL:0000047!5.43e-09!33;CL:0000031!5.43e-09!33;CL:0000404!5.43e-09!33;CL:0002319!1.36e-07!43;CL:0000221!5.71e-07!44;CL:0000133!5.71e-07!44
|ontology_enrichment_celltype=CL:0000117!1.62e-11!23;CL:0000337!1.62e-11!23;CL:0000540!5.43e-09!33;CL:0000047!5.43e-09!33;CL:0000031!5.43e-09!33;CL:0000404!5.43e-09!33;CL:0002319!1.36e-07!43;CL:0000221!5.71e-07!44;CL:0000133!5.71e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,1.62e-11,23;CL:0000337,1.62e-11,23;CL:0000540,5.43e-09,33;CL:0000047,5.43e-09,33;CL:0000031,5.43e-09,33;CL:0000404,5.43e-09,33;CL:0002319,1.36e-07,43;CL:0000221,5.71e-07,44;CL:0000133,5.71e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!6.29e-13!75;UBERON:0001016!6.29e-13!75;UBERON:0001017!2.36e-12!73;UBERON:0005743!2.36e-12!73;UBERON:0001049!2.77e-11!52;UBERON:0005068!2.77e-11!52;UBERON:0006241!2.77e-11!52;UBERON:0007135!2.77e-11!52;UBERON:0000955!3.87e-11!50;UBERON:0006238!3.87e-11!50;UBERON:0004121!8.95e-11!102;UBERON:0000924!8.95e-11!102;UBERON:0006601!8.95e-11!102;UBERON:0002616!1.01e-10!49;UBERON:0000033!6.73e-10!63;UBERON:0002020!2.31e-09!34;UBERON:0002346!3.56e-08!71;UBERON:0003075!3.56e-08!71;UBERON:0007284!3.56e-08!71;UBERON:0002791!9.12e-08!29;UBERON:0003528!9.12e-08!29;UBERON:0001893!9.12e-08!29;UBERON:0003080!1.08e-07!40;UBERON:0003056!2.57e-07!49;UBERON:0002780!3.45e-07!39;UBERON:0001890!3.45e-07!39;UBERON:0006240!3.45e-07!39;UBERON:0000153!6.04e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.29e-13,75;UBERON:0004121,7.04e-13,95;UBERON:0000924,7.04e-13,95;UBERON:0006601,7.04e-13,95;UBERON:0000073,2.15e-12,54;UBERON:0001017,2.36e-12,73;UBERON:0001049,2.77e-11,52;UBERON:0005068,2.77e-11,52;UBERON:0006241,2.77e-11,52;UBERON:0007135,2.77e-11,52;UBERON:0002346,1.99e-10,64;UBERON:0003075,1.99e-10,64;UBERON:0007284,1.99e-10,64;UBERON:0000955,1.63e-09,47;UBERON:0006238,1.63e-09,47;UBERON:0002020,2.31e-09,34;UBERON:0010371,2.39e-09,73;UBERON:0002616,4.07e-09,46;UBERON:0003528,9.12e-08,29;UBERON:0002791,9.12e-08,29;UBERON:0001893,9.12e-08,29;UBERON:0003080,1.08e-07,40;UBERON:0003056,2.57e-07,49;UBERON:0002780,3.45e-07,39;UBERON:0001890,3.45e-07,39;UBERON:0006240,3.45e-07,39
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398,19.3153493770506,14.7967316925868,15.2634456090562,17.250642535948,16.8580432981026,16.1174238664405,16.4906243449939,15.9426417148905,23.6108938973032,238.442113063413,24.2216804591246,15.8840150838814,34.8067627135845,20.7947315799147,20.6126473098749,19.7160160924867,21.7441322689397,31.2480846388618,73.4415727311058,107.723222340442,20.8567339614598,17.4343685149541,16.3310421892075,14.1613697045797,21.1251500887628,23.245718509408,19.5918582717549,19.199638532695,18.1739609906666,18.213426790545,23.1900225814733,25.7288805152946,19.2423683280659,18.8171812512326,25.8472637321341,18.8688060367955,15.3410694802203,25.0148078382477,19.8985281853156,25.1494517104584,23.2602562819427,22.93741656146,19.0597399533438,20.3310663342144,20.714635642823,21.1971339972577,22.3409137046794,24.6629707117431,22.661816921691,18.9006300064906,25.2179873805563,26.7354021300681,23.8169743405837,22.0029176878455,33.1190644922856,19.9758318732337,20.664070950805,19.7036372870303,19.6712554041515,19.5577120465421,18.9552252659783,18.6133141563253,20.9738685763952,21.2922611907801,21.3147765766266,20.9756976732537,24.2015076090406,26.0182674368928,33.3405583898152,25.7263203597579,27.5860185263098,26.7855835522149,20.75504773895,20.9150243955103,21.8295241575985,20.2670761455223,21.6566160782169,22.5862512996793,21.8305688360525,19.3903651245139,19.4671586464004,23.2225034676424,17.3954104213899,24.9133538060766,22.557526464004,22.0984763311632,27.5787577311019,28.1643652032466,24.2316260599808,20.8199131516413,19.3383948643468,24.1023298406743,20.2944105589954,14.6076736440866
|phase1_expression=16.0148847104794,30.0118850569851,33.6699437148257,39.6228116811947,47.0841986149566,17.1236857350128,17.7545606852599,19.497621839678,13.51571732656,14.0438715793196,14.5535272991679,15.3960266860999,24.8241058400248,22.6418842265203,19.3203661853084,28.7514879693553,24.4846657344851,18.7699988388151,20.978508341678,15.7024171165271,51.1110173807929,9.92909512008853,8.8807928307238,15.359272588167,12.15869189656,19.5238867799107,17.230479846363,11.8509177977239,12.1614988452079,12.8535366177565,10.4213340007993,24.131165591466,46.1298590688428,31.6963362030877,10.6875099307972,6.81562045969819,10.6168065256432,15.9042019680025,13.2827008569046,8.37637990358077,18.8234076169925,16.3930916390027,17.9638830621527,10.0717454380462,12.0638548151222,13.0318194034794,18.7773922643529,20.0583143870011,18.8930117151646,26.2480363750283,24.4976237844384,20.125359011096,15.4359997573117,31.1905721064878,23.8626597391149,20.8380143189117,18.6246735960192,21.6582278756526,33.3822160418336,26.9785399428737,29.7900759647904,16.9422266034566,18.6751907183339,8.99899717281399,18.7884608887725,12.7886420690298,14.081205194365,16.1371688235053,27.4777472617466,29.5663004946403,27.552569937031,26.8511925339575,23.1911967999194,27.1929574257198,28.8494867764891,27.5765635983006,49.5521464497249,38.4338887636415,39.1696659803421,33.2353445080089,34.9482798561205,31.2548022334056,36.2937898701795,29.2636557216474,36.3659829708808,28.5789727909458,25.7692742246376,33.7382996943794,24.0052032866193,27.2057616384428,24.9283460283443,19.7897491705719,14.2793980078628,17.2705021324101,26.6408331153544,20.6092368064774,18.2577746171277,5.96506129023202,5.71529210126311,4.24007489412408,13.239281459008,10.2661181931454,40.7688383530633,21.3320010945999,15.154372870785,12.92135313923,20.2209778005913,19.1828917928021,32.1082975722493,23.1569736941127,16.1341353892506,16.4411358288556,18.9104707749968,17.3331036635516,15.2865319276416,16.5879900555172,23.7307169024999,21.5453041810668,30.9613693182456,23.7797269422691,18.5506875506731,16.0008833534623,20.5030937339934,40.9893115816166,31.8358994356452,19.9256503062701,7.18890747035522,6.59893004092748,6.09937089950711,41.1924258363262,29.2800385803921,24.2512899577828,35.4601613192244,26.5944075623544,36.9862719316017,34.0706652442291,18.4329248569072,16.048499208702,15.9215337813215,28.409650544674,16.9156575851515,13.3343220571414,20.5270827978098,19.4409215008072,26.1940521732612,22.8042422107033,21.4576949241779,26.1290404446406,27.5927030954038,29.5005485061798,21.9938905204936,16.4396799320681,20.2974491934686,20.1986256582857,20.1666493679785,22.2918378836712,5.61770549850588,7.72043721344146,8.80906848126337,22.9909607514407,18.2930326785255,14.2249028554202,22.490749880595,20.2667158699826,16.1980468531747,16.0448421877781,25.4859731329638,18.7992201211143,19.9117418395311,17.237583728305,22.6992666728396,20.6141982269719,18.4422096844483,18.2520729514106,25.8656636733877,22.433205498684,28.4160153366066,21.1560453330835,18.7693660471006,18.3466970769746,16.2373001265838,17.1430995929841,16.9007313322101,14.0766963323294,21.353807769503,11.5289268306808,13.3207660664143,17.7071260116624,15.5971269695296,18.8752075817387,16.8587678902262,16.9270082266212,12.3284135619503,20.4504837571415,20.2873924211545,19.9578301288408,16.0980564349129,19.3574862897279,18.5283053774074,20.8130308651239,20.5668333472201,14.9310568345379,19.2694207606647,27.5294424431555,22.8008434331315,23.3856596880248,26.7775360232824,23.3941844959844,14.7682994033223,17.5494643844994,15.2407113168533,13.453509246216,4.31304619582064,16.7463426450827,15.601883655728,14.1444171650383,19.1955232468446,20.2626278972614,28.6367444758237,16.6752442358027,23.9558515369778,16.9745085775188,19.0099101113687,20.7707759227852,20.4717531161972,22.8306367993625,22.8570958953977,20.5962161373361,25.8316725225129,19.6635977658886,20.2041428783098,16.9239398540369,15.0791283939272,10.3342079925555,18.1952781017043,23.4546234359023,39.6559957269846,37.3905280229128,12.131185957874,22.2174415939848,19.8770178232242,21.4741309363151,19.6035291936847,18.4005974423465,26.2902435417225,25.1938112402061,20.6453457854196,18.9966307642353,22.9266911208984,29.2402397943844,21.149072696032,23.3265940804104,21.9897395127328,25.2404288147979,33.1862845849907,19.1796702562435,16.3254720760966,18.6719028958339,28.9395855023157,22.4427657999067,19.3821219876166,20.3578888507403,17.1118741624666,22.1225730555071,35.8423269154996,28.8779521094923,23.1498931912576,17.1058039329745,19.0157265160649,18.4329850127169,20.2167866352192,21.7609957474526,21.2268236576736,20.0946866415636,30.5073220482823,26.4790088579775,14.5548742716275,20.1161228588606,21.7976976039472,21.8332788239924,21.845138952574,22.9797259643086,16.6144076879015,41.5352676503542,23.5801815501037,22.0833948720648,15.9267293537952,19.2135826144785,26.7920686333209,21.5051482814131,11.728511669576,8.81694149639045,12.714397590007,4.77335309007557,19.4546636052398,19.3153493770506,14.7967316925868,15.2634456090562,17.250642535948,16.8580432981026,16.1174238664405,16.4906243449939,15.9426417148905,23.6108938973032,238.442113063413,24.2216804591246,15.8840150838814,34.8067627135845,20.7947315799147,20.6126473098749,19.7160160924867,21.7441322689397,31.2480846388618,73.4415727311058,107.723222340442,20.8567339614598,17.4343685149541,16.3310421892075,14.1613697045797,21.1251500887628,23.245718509408,19.5918582717549,19.199638532695,18.1739609906666,18.213426790545,23.1900225814733,25.7288805152946,19.2423683280659,18.8171812512326,25.8472637321341,18.8688060367955,15.3410694802203,25.0148078382477,19.8985281853156,25.1494517104584,23.2602562819427,22.93741656146,19.0597399533438,20.3310663342144,20.714635642823,21.1971339972577,22.3409137046794,24.6629707117431,22.661816921691,18.9006300064906,25.2179873805563,26.7354021300681,23.8169743405837,22.0029176878455,33.1190644922856,19.9758318732337,20.664070950805,19.7036372870303,19.6712554041515,19.5577120465421,18.9552252659783,18.6133141563253,20.9738685763952,21.2922611907801,21.3147765766266,20.9756976732537,24.2015076090406,26.0182674368928,33.3405583898152,25.7263203597579,27.5860185263098,26.7855835522149,20.75504773895,20.9150243955103,21.8295241575985,20.2670761455223,21.6566160782169,22.5862512996793,21.8305688360525,19.3903651245139,19.4671586464004,23.2225034676424,17.3954104213899,24.9133538060766,22.557526464004,22.0984763311632,27.5787577311019,28.1643652032466,24.2316260599808,20.8199131516413,19.3383948643468,24.1023298406743,20.2944105589954,14.6076736440866
|short_description=p3@Ubr4
|short_description=p3@Ubr4
}}
}}

Latest revision as of 14:47, 26 September 2015

Short description:p3@Ubr4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ubr4_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: -2bp_to_ENSMUST00000064355, ENSMUST00000097822, ENSMUST00000165860, NM_001160319, uc008vmj.2, uc008vmm.2_5end
EntrezGene:Ubr4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ubr4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I530.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I633.67
CD326+ enterocyte, pool1.CNhs13542.11848-124I339.62
CD326+ enterocyte, pool2.CNhs13197.11849-124I447.08
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I717.12
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.75
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.50
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E713.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E614.55
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F115.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E424.82
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E822.64
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A119.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A328.75
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A524.48
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A218.77
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A420.98
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A615.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A351.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.88
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D115.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.16
GP2+ M cell, pool1.CNhs13228.11845-124H919.52
GP2+ M cell, pool2.CNhs13231.11846-124I117.23
GP2+ M cell, pool3.CNhs13240.11847-124I211.85
Ileum epithelium, pool1.CNhs13199.10252-104B912.16
Ileum epithelium, pool2.CNhs13232.10253-104C112.85
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I324.13
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G646.13
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.69
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F710.62
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G815.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H113.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.38
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G918.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H216.39
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H417.96
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.06
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.03
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B718.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C220.06
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B818.89
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C326.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C424.50
Mouse Astrocytes, donor3.CNhs12107.11633-122C420.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A215.44
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I931.19
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A123.86
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C120.84
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E118.62
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C521.66
Mouse Granule cells, donor1.CNhs12131.11713-123C333.38
Mouse Granule cells, donor2.CNhs12357.11731-123E326.98
Mouse Granule cells, donor3.CNhs12108.11636-122C729.79
Mouse Meningeal cells, donor1.CNhs12132.11716-123C616.94
Mouse Meningeal cells, donor3.CNhs12109.11639-122D118.68
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E718.79
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D212.79
Mouse Microglia, donor1.CNhs12629.11718-123C814.08
Mouse Microglia, donor2.CNhs12634.11736-123E816.14
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D527.48
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F529.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D927.55
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F126.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D523.19
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D227.19
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F228.85
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D627.58
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D349.55
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F338.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D739.17
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D433.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F434.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D831.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E436.29
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E529.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I636.37
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D628.58
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F625.77
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E133.74
Mouse Schwann, donor1.CNhs12507.11728-123D924.01
Mouse Schwann, donor2.CNhs12573.11746-123F927.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G324.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F719.79
Mouse hepatocyte, donor1.CNhs13078.11714-123C414.28
Mouse hepatocyte, donor3.CNhs12615.11637-122C817.27
Mouse hepatocyte, donor6.CNhs13090.11822-124F426.64
Mouse hepatocyte, donor8.CNhs13091.11824-124F620.61
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A718.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G613.24
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I840.77
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G115.15
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.92
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G320.22
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B619.18
accessory axillary lymph node, adult.CNhs10475.1063-29H932.11
adrenal gland, adult.CNhs10508.49-24D723.16
adrenal gland, embryo E14.CNhs11038.406-44C516.13
adrenal gland, embryo E16.CNhs11004.1254-43D616.44
adrenal gland, embryo E17.CNhs11043.1263-45I118.91
adrenal gland, embryo E18.CNhs11026.1262-18F517.33
adrenal gland, neonate N00.CNhs11191.1311-23C115.29
adrenal gland, neonate N25.CNhs11223.1377-27I316.59
amnion, adult pregnant day17.5.CNhs10488.583-22A823.73
aorta, adult.CNhs10498.46-23H121.55
bone (os femoris), adult.CNhs10483.56-12G230.96
bone (os femoris), neonate N02.CNhs11227.1985-43F523.78
bone (os femoris), neonate N16.CNhs11225.1525-43A618.55
bone (os femoris), neonate N20.CNhs11195.1350-25C316.00
cecum, adult.CNhs10467.37-13H420.50
cerebellum, adult.CNhs10494.15-8B240.99
cerebellum, neonate N30.CNhs11135.1395-42I231.84
colon, adult.CNhs10468.36-18H719.93
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.19
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.10
corpora quadrigemina, adult.CNhs10501.16-22A441.19
corpus striatum, adult.CNhs10487.19-21D829.28
corpus striatum, neonate N00.CNhs11226.630-43F124.25
cortex, adult.CNhs10473.12-14D535.46
cortex, neonate N30.CNhs11107.1392-42F226.59
diencephalon, adult.CNhs10482.20-12F236.99
diencephalon, neonate N30.CNhs11201.1388-42B234.07
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B118.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.05
epididymis, adult.CNhs10490.58-23B215.92
eyeball, adult.CNhs10484.31-12G428.41
eyeball, embryo E12.CNhs11016.345-16C616.92
eyeball, embryo E14.CNhs10521.399-16E213.33
eyeball, embryo E15.CNhs10593.426-16C920.53
eyeball, embryo E17.CNhs11023.1261-18D419.44
eyeball, neonate N00.CNhs11207.633-15C626.19
eyeball, neonate N01.CNhs11140.1532-43E722.80
eyeball, neonate N02.CNhs11205.1551-44G821.46
eyeball, neonate N16.CNhs11188.777-19A226.13
forelimb, embryo E11.CNhs10596.335-25E227.59
forelimb, embryo E12.CNhs10600.359-14H229.50
forelimb, embryo E13.CNhs10589.384-1E221.99
forelimb, embryo E14.CNhs10577.413-26A816.44
forelimb, embryo E15.CNhs11007.437-20E720.30
forelimb, embryo E17.CNhs10598.1517-43C420.20
forelimb, embryo E18.CNhs11008.1520-43B520.17
gonad, embryo E13.CNhs11044.1564-45I622.29
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.72
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D58.81
heart, embryo E11.CNhs10586.331-24E922.99
heart, embryo E12.CNhs11015.353-12F518.29
heart, embryo E13.CNhs11013.376-3I914.22
heart, embryo E14.CNhs10597.403-26D422.49
heart, embryo E15.CNhs11017.431-16C820.27
heart, embryo E16.CNhs11021.457-17C616.20
heart, embryo E17.CNhs11025.479-18E516.04
heart, embryo E18.CNhs11030.1283-20G325.49
heart, neonate N00.CNhs11213.639-21E318.80
heart, neonate N03.CNhs11221.1349-25I219.91
heart, neonate N10.CNhs11118.749-24G117.24
heart, neonate N16.CNhs11209.782-15G122.70
heart, neonate N20.CNhs11127.821-26I620.61
heart, neonate N25.CNhs11196.1351-25D318.44
heart, neonate N30.CNhs11202.1390-42D218.25
hippocampus, adult.CNhs10478.13-16E825.87
hippocampus, neonate N00.CNhs11228.627-43G122.43
intestinal mucosa, adult.CNhs10506.860-29I328.42
intestine, adult.CNhs10496.178-9A321.16
intestine, embryo E12.CNhs11019.1251-16I518.77
intestine, embryo E13.CNhs11010.381-16D518.35
intestine, embryo E15.CNhs10602.976-16D816.24
intestine, embryo E16.CNhs10585.463-22H417.14
intestine, embryo E17.CNhs10582.482-18D316.90
intestine, embryo E18.CNhs10526.1289-20F714.08
intestine, neonate N00.CNhs11126.644-26D121.35
intestine, neonate N01.CNhs11192.1322-23E911.53
intestine, neonate N06.CNhs11102.688-20B813.32
intestine, neonate N07.CNhs11095.720-20F217.71
intestine, neonate N10.CNhs11098.755-23A515.60
intestine, neonate N20.CNhs11187.827-18D118.88
intestine, neonate N25.CNhs11121.1352-25E316.86
intestine, neonate N30.CNhs11131.1384-42G116.93
kidney, embryo E14.CNhs10606.411-4I912.33
kidney, embryo E15.CNhs10997.434-16F820.45
kidney, embryo E16.CNhs10584.464-22A520.29
kidney, embryo E17.CNhs11028.483-18I219.96
kidney, embryo E18.CNhs11001.1288-20C716.10
kidney, neonate N00.CNhs11214.646-21G719.36
kidney, neonate N10.CNhs11206.758-6D518.53
kidney, neonate N20.CNhs11113.832-19I120.81
kidney, neonate N25.CNhs11122.1353-25F320.57
kidney, neonate N30.CNhs11203.1385-42H114.93
liver, adult pregnant day01.CNhs10466.508-5B219.27
liver, embryo E12.CNhs10601.355-15F827.53
liver, embryo E13.CNhs10524.378-3H622.80
liver, embryo E14.CNhs10594.409-16E123.39
liver, embryo E15.CNhs10520.433-16D726.78
liver, embryo E16.CNhs10523.462-17F523.39
liver, embryo E17.CNhs10510.481-18A314.77
liver, embryo E18.CNhs10579.499-43G417.55
liver, neonate N00.CNhs11117.641-24F415.24
liver, neonate N03.CNhs11123.1345-25G213.45
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H216.75
liver, neonate N10.CNhs11115.751-24B915.60
liver, neonate N20.CNhs11220.823-25A314.14
liver, neonate N25.CNhs11198.1368-26H119.20
liver, neonate N30.CNhs11106.1382-42D120.26
lung, adult.CNhs10474.28-22B128.64
lung, embryo E12.CNhs10522.354-16G216.68
lung, embryo E14.CNhs10604.404-26F823.96
lung, embryo E15.CNhs11020.432-17C516.97
lung, embryo E16.CNhs10998.458-17B619.01
lung, embryo E17.CNhs10605.480-44A620.77
lung, embryo E18.CNhs10583.1287-20I620.47
lung, neonate N00.CNhs11224.640-42C622.83
lung, neonate N06.CNhs11212.683-20E522.86
lung, neonate N07.CNhs11111.715-19A320.60
lung, neonate N10.CNhs11219.750-23E625.83
lung, neonate N20.CNhs11109.822-18A419.66
lung, neonate N25.CNhs11119.1359-25C720.20
lung, neonate N30.CNhs11133.1394-42H216.92
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A110.33
mammary gland, adult lactating day02.CNhs10480.595-22B618.20
mammary gland, adult pregnant day19.CNhs10476.588-5H223.45
medulla oblongata, adult.CNhs10477.17-12C239.66
medulla oblongata, neonate N30.CNhs11200.1396-42A337.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C712.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C222.22
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E119.88
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E221.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E319.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D718.40
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D826.29
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D925.19
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D420.65
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D622.93
olfactory brain, adult.CNhs10489.18-22I929.24
ovary, adult.CNhs10507.91-2I721.15
ovary, embryo E18.CNhs11040.505-44H723.33
ovary, neonate N00.CNhs11217.1299-22I421.99
oviduct, adult pregnant day01.CNhs10500.988-6G625.24
pancreas, adult.CNhs10486.34-16E433.19
pancreas, embryo E14.CNhs11012.405-44F419.18
pancreas, embryo E15.CNhs11042.1556-45F216.33
pancreas, embryo E16.CNhs11003.460-26E518.67
pancreas, embryo E17.CNhs10599.1558-45G328.94
pancreas, embryo E18.CNhs10580.1535-43I722.44
pancreas, neonate N00.CNhs11105.645-26G919.38
pancreas, neonate N01.CNhs11138.1531-43D720.36
pancreas, neonate N02.CNhs11139.1539-43D817.11
pancreas, neonate N16.CNhs11136.787-43B622.12
pancreas, neonate N25.CNhs11094.1555-45E235.84
pancreas, neonate N30.CNhs11182.1548-44H528.88
pituitary gland, adult.CNhs10493.21-1G823.15
pituitary gland, embryo E12.CNhs11018.346-16E617.11
pituitary gland, embryo E13.CNhs11009.370-44C719.02
pituitary gland, embryo E14.CNhs11037.398-44A518.43
pituitary gland, embryo E15.CNhs10592.427-16B920.22
pituitary gland, embryo E16.CNhs11036.449-43F621.76
pituitary gland, embryo E17.CNhs11039.1265-44F521.23
pituitary gland, neonate N00.CNhs11190.1308-22E920.09
placenta, adult pregnant day10.CNhs10472.539-13I730.51
placenta, adult pregnant day17.CNhs10464.577-18G326.48
prostate, adult.CNhs10470.859-1F814.55
skin, adult.CNhs10492.30-1C320.12
skin, neonate N00.CNhs11124.650-25G421.80
skin, neonate N03.CNhs11215.662-22H321.83
skin, neonate N06.CNhs11097.693-20I521.85
skin, neonate N10.CNhs11108.762-6C422.98
small intestine, neonate N16.CNhs11114.790-21I116.61
spinal cord, adult.CNhs10505.24-13C941.54
spleen, adult.CNhs10465.25-2G223.58
spleen, embryo E16.CNhs11035.461-43C122.08
spleen, embryo E18.CNhs11011.1271-21F215.93
spleen, neonate N10.CNhs11116.752-24D119.21
spleen, neonate N20.CNhs11112.824-19H126.79
spleen, neonate N25.CNhs11099.1354-25G321.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.71
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E319.45
stomach, embryo E15.CNhs10603.1252-16G819.32
stomach, embryo E16.CNhs11022.459-17D414.80
stomach, embryo E17.CNhs11006.1035-18D515.26
stomach, embryo E18.CNhs10999.1286-20C617.25
stomach, neonate N03.CNhs11193.1340-24B816.86
stomach, neonate N07.CNhs11210.718-18A916.12
stomach, neonate N25.CNhs11104.1355-25E416.49
stomach, neonate N30.CNhs11134.1386-42I115.94
submandibular gland, adult.CNhs10469.59-29C123.61
testis, adult.CNhs10504.57-7G5238.44
testis, embryo E13.CNhs11031.389-23F524.22
testis, embryo E15.CNhs11034.443-27C515.88
testis, embryo E16.CNhs11033.470-26G534.81
testis, embryo E17.CNhs11029.486-18I520.79
testis, embryo E18.CNhs11027.503-18G520.61
testis, neonate N00.CNhs11189.1300-22B719.72
testis, neonate N07.CNhs11222.726-26I421.74
testis, neonate N10.CNhs11204.763-44D931.25
testis, neonate N20.CNhs11110.839-18H373.44
testis, neonate N30.CNhs11130.1391-42E2107.72
thymus, adult.CNhs10471.38-12B520.86
thymus, embryo E14.CNhs11041.402-44I417.43
thymus, embryo E15.CNhs11005.430-45I216.33
thymus, embryo E16.CNhs11002.456-26C514.16
thymus, embryo E17.CNhs10581.478-18C121.13
thymus, embryo E18.CNhs10595.1273-19G423.25
thymus, neonate N02.CNhs11181.1541-43F819.59
thymus, neonate N03.CNhs11137.2104-43C719.20
thymus, neonate N06.CNhs11197.681-26C418.17
thymus, neonate N07.CNhs11211.713-19D318.21
thymus, neonate N10.CNhs11194.748-24E423.19
thymus, neonate N20.CNhs11186.820-7A225.73
thymus, neonate N25.CNhs11125.1362-25G719.24
thymus, neonate N30.CNhs11132.1393-42G218.82
tongue, adult.CNhs10499.32-1B425.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H318.87
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F715.34
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G525.01
urinary bladder, adult.CNhs10481.879-12E419.90
uterus, adult pregnant day19.CNhs10497.590-15F525.15
uterus, adult.CNhs10509.92-27E523.26
vagina, adult.CNhs10502.89-27D522.94
vesicular gland, adult.CNhs10491.51-27F819.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.33
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A220.71
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A321.20
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A424.66
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A522.66
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.90
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A725.22
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A826.74
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A923.82
whole body, embryo E11.CNhs11014.324-5I822.00
whole body, embryo E12.CNhs10587.857-27C933.12
whole body, embryo E13.CNhs10512.372-23H219.98
whole body, embryo E14.5.CNhs10578.420-27D220.66
whole body, embryo E14.CNhs10519.395-14B119.70
whole body, embryo E16.CNhs10514.453-14F219.67
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G519.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.96
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G518.61
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G520.97
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G521.29
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G521.31
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G520.98
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G524.20
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G526.02
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G533.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G525.73
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G527.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G526.79
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.76
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G520.92
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G521.83
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G520.27
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G521.66
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G522.59
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G521.83
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G519.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G523.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.40
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G524.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G522.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G522.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G527.58
whole body, embryo E17.5.CNhs10513.490-9F928.16
whole body, embryo E17.CNhs10517.475-3I524.23
whole body, embryo E18.CNhs10516.493-3B320.82
whole body, neonate N00.CNhs10525.657-19C219.34
whole body, neonate N01.CNhs10576.659-23C624.10
whole body, neonate N06.CNhs10515.692-21D120.29
whole body, neonate N10.CNhs10518.761-6B414.61





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.62e-1123
neuroblast (sensu Vertebrata)1.62e-1123
neuron5.43e-0933
neuronal stem cell5.43e-0933
neuroblast5.43e-0933
electrically signaling cell5.43e-0933
neural cell1.36e-0743
ectodermal cell5.71e-0744
neurectodermal cell5.71e-0744

Uber anatomy
Ontology termp-valuen
nervous system6.29e-1375
ectoderm-derived structure7.04e-1395
ectoderm7.04e-1395
presumptive ectoderm7.04e-1395
regional part of nervous system2.15e-1254
central nervous system2.36e-1273
neural tube2.77e-1152
neural rod2.77e-1152
future spinal cord2.77e-1152
neural keel2.77e-1152
neurectoderm1.99e-1064
neural plate1.99e-1064
presumptive neural plate1.99e-1064
brain1.63e-0947
future brain1.63e-0947
gray matter2.31e-0934
ecto-epithelium2.39e-0973
regional part of brain4.07e-0946
brain grey matter9.12e-0829
regional part of telencephalon9.12e-0829
telencephalon9.12e-0829
anterior neural tube1.08e-0740
pre-chordal neural plate2.57e-0749
regional part of forebrain3.45e-0739
forebrain3.45e-0739
future forebrain3.45e-0739
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